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The map label for this gene is csoR [H]

Identifier: 229918190

GI number: 229918190

Start: 2425650

End: 2425952

Strand: Direct

Name: csoR [H]

Synonym: EAT1b_2470

Alternate gene names: 229918190

Gene position: 2425650-2425952 (Clockwise)

Preceding gene: 229918189

Following gene: 229918191

Centisome position: 80.86

GC content: 46.86

Gene sequence:

>303_bases
ATGGATGAATTTATGCATGACCAACCACTCGTTCCGCGGGATGATGCCGAACGGGAGGCACTCGGGAAACGTCTAAAACG
AATCGAAGGACAAGTCCGAGGGATTCAAAAAATGGTCGAGAACGACCGCTATTGTGTCGATATTTTGACACAGACGTCAG
CCATTCAGGCCGCTCTGAAGCAAGTCGAGATGCAACTGTTAGAACGTCATATGCGCAAGTGTTTGGTTCACGCAAGCGAG
ACGGAAAACATGGAACCTTACATTGATGAATTGATGACAATCGTCAGCCGCATCAAAAAATAA

Upstream 100 bases:

>100_bases
AATAGTTGAGTAGAGAGGGGCGACTTAGTTCGCCCTTTTATTATTCTTTTTATTTGACACTGTTACGGGGTAGGGGTATA
TTAATGGTGAGGTGATCAAC

Downstream 100 bases:

>100_bases
GGAGGAATGTCATGAAAACCGTTGAGTTATCCATACAAGGTATGACCTGTGCGGCTTGTTCGGCACGGATTGAGAAAGTA
TTGAACAAGATGGACGGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MDEFMHDQPLVPRDDAEREALGKRLKRIEGQVRGIQKMVENDRYCVDILTQTSAIQAALKQVEMQLLERHMRKCLVHASE
TENMEPYIDELMTIVSRIKK

Sequences:

>Translated_100_residues
MDEFMHDQPLVPRDDAEREALGKRLKRIEGQVRGIQKMVENDRYCVDILTQTSAIQAALKQVEMQLLERHMRKCLVHASE
TENMEPYIDELMTIVSRIKK
>Mature_100_residues
MDEFMHDQPLVPRDDAEREALGKRLKRIEGQVRGIQKMVENDRYCVDILTQTSAIQAALKQVEMQLLERHMRKCLVHASE
TENMEPYIDELMTIVSRIKK

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 11741; Mature: 11741

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
7.0 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
7.0 %Met     (Mature Protein)
9.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEFMHDQPLVPRDDAEREALGKRLKRIEGQVRGIQKMVENDRYCVDILTQTSAIQAALK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QVEMQLLERHMRKCLVHASETENMEPYIDELMTIVSRIKK
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDEFMHDQPLVPRDDAEREALGKRLKRIEGQVRGIQKMVENDRYCVDILTQTSAIQAALK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QVEMQLLERHMRKCLVHASETENMEPYIDELMTIVSRIKK
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]