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The map label for this gene is ecsB [H]

Identifier: 229918180

GI number: 229918180

Start: 2414876

End: 2416009

Strand: Direct

Name: ecsB [H]

Synonym: EAT1b_2460

Alternate gene names: 229918180

Gene position: 2414876-2416009 (Clockwise)

Preceding gene: 229918179

Following gene: 229918182

Centisome position: 80.5

GC content: 51.76

Gene sequence:

>1134_bases
ATGAATCGATTTACAGCAAGGCTCGGAACTTGGATGGAAGAGGTCGTCAAGTACAGCCGCTACGTTGCGAACGGGGGACT
GTTGTTCACGCTCTATTTCACCTTGATTTACGGGGCGTTCGTCTACAATAACTTCTTAGAACGAATCGATGGGACATTCC
CAGGAACGTGGATTGCCGCGGGGGTCCTATTGCTCATGCCACTCGGTCATCGCCCGCGAACGTTCATTCAAGAGGCGGAT
CAAGTATTTTTGCTTCCGGAGTTAGGGGATATTCGTTCTTATATGGTGGGGGTACGTTTATTTAATCTCGTGTTTGCTTC
ACTGCGTGGATTGCTCGTCCTTCTCGTTTTACTACCGCTCCTCGTACGGACAGAGAGTTATACGAGTATCGAAGTGTTAT
CCGTCGTCGTCACGATGGTCATGTTGTCAGCTGCAGGCCGTTTGGCAAAAGTGGAAGGCGTACGTGAATGGACAATCCTA
CCGTTTGCGCTCGTGAGCGGCGCTTGTCTTCTAATGGATTGGACAGCGTGGGCATGGGTGCCCGCGTTCATGCCGTTCAT
TTTCTTACATGTGAAACGAAACGAGCGCATCCCGCTCTTACACTGGTTGGTGCTTGAGGAGAAGAGTCGGGCTCAGTTTG
AACGAGTGATCAGCTGGTTCGTCGATTTGCCGACCTTGAAAGAAGAGGTTCGAGAGCGCCGGGTGTTGACGCGGCTTCTA
GAAAATCGGGTCCTACGGCGCGTAGATGCATCGCGTTACGTGTACGGACTTCGCATTCTCCGTTCGAACGACTCACTTGA
TTTGATTCTTCGCTTGACTGTGGTGGCGCTCATTGTCATGTGGATGTCGGGAGGATGGTACGTCGGATTGGTCACGCCGC
TCTTCGTAGGCTTGACCGCGTTGCAGCTCGTTCCGTTATTTAAACGGTTAGAGGCGATTTCTATCGTTTCCTGGCTCCCA
ATCACACGCGATGAGCGAATCGTAGGGTATTCGTGGTGGGCGATGCGACTGCTCGTCATCCAGGCCGTCGTTCTTATGAT
TGCATCCATCGCTTTCGGTGCCACATGGGATGCGGCGGTCGGATTGGTCTTGTCTGTCATGGTCACACGCTATTACTTGA
ATCGATTGAAATAA

Upstream 100 bases:

>100_bases
GCGGAACAGCGGCCGAGTTGCGCGACGTGTATCGATTGTCGCCTGATGCGACACTTGATGATATATATGTAGAAGCAATC
GCTTCGGAGGAACGGTCGTC

Downstream 100 bases:

>100_bases
AAAGAAGGACATCCCGCACAGGATGTCCTTCTCACGTGAGTAGATTATTTTTTAGGTGACATGACCGATACGCTCGAACC
GAGAATCTTCGGGAGGCGTC

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MNRFTARLGTWMEEVVKYSRYVANGGLLFTLYFTLIYGAFVYNNFLERIDGTFPGTWIAAGVLLLMPLGHRPRTFIQEAD
QVFLLPELGDIRSYMVGVRLFNLVFASLRGLLVLLVLLPLLVRTESYTSIEVLSVVVTMVMLSAAGRLAKVEGVREWTIL
PFALVSGACLLMDWTAWAWVPAFMPFIFLHVKRNERIPLLHWLVLEEKSRAQFERVISWFVDLPTLKEEVRERRVLTRLL
ENRVLRRVDASRYVYGLRILRSNDSLDLILRLTVVALIVMWMSGGWYVGLVTPLFVGLTALQLVPLFKRLEAISIVSWLP
ITRDERIVGYSWWAMRLLVIQAVVLMIASIAFGATWDAAVGLVLSVMVTRYYLNRLK

Sequences:

>Translated_377_residues
MNRFTARLGTWMEEVVKYSRYVANGGLLFTLYFTLIYGAFVYNNFLERIDGTFPGTWIAAGVLLLMPLGHRPRTFIQEAD
QVFLLPELGDIRSYMVGVRLFNLVFASLRGLLVLLVLLPLLVRTESYTSIEVLSVVVTMVMLSAAGRLAKVEGVREWTIL
PFALVSGACLLMDWTAWAWVPAFMPFIFLHVKRNERIPLLHWLVLEEKSRAQFERVISWFVDLPTLKEEVRERRVLTRLL
ENRVLRRVDASRYVYGLRILRSNDSLDLILRLTVVALIVMWMSGGWYVGLVTPLFVGLTALQLVPLFKRLEAISIVSWLP
ITRDERIVGYSWWAMRLLVIQAVVLMIASIAFGATWDAAVGLVLSVMVTRYYLNRLK
>Mature_377_residues
MNRFTARLGTWMEEVVKYSRYVANGGLLFTLYFTLIYGAFVYNNFLERIDGTFPGTWIAAGVLLLMPLGHRPRTFIQEAD
QVFLLPELGDIRSYMVGVRLFNLVFASLRGLLVLLVLLPLLVRTESYTSIEVLSVVVTMVMLSAAGRLAKVEGVREWTIL
PFALVSGACLLMDWTAWAWVPAFMPFIFLHVKRNERIPLLHWLVLEEKSRAQFERVISWFVDLPTLKEEVRERRVLTRLL
ENRVLRRVDASRYVYGLRILRSNDSLDLILRLTVVALIVMWMSGGWYVGLVTPLFVGLTALQLVPLFKRLEAISIVSWLP
ITRDERIVGYSWWAMRLLVIQAVVLMIASIAFGATWDAAVGLVLSVMVTRYYLNRLK

Specific function: Presumed to form part of an ABC-transporter, it may form a transport channel [H]

COG id: COG4473

COG function: function code U; Predicted ABC-type exoprotein transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010288 [H]

Pfam domain/function: PF05975 EcsB [H]

EC number: NA

Molecular weight: Translated: 43265; Mature: 43265

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRFTARLGTWMEEVVKYSRYVANGGLLFTLYFTLIYGAFVYNNFLERIDGTFPGTWIAA
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
GVLLLMPLGHRPRTFIQEADQVFLLPELGDIRSYMVGVRLFNLVFASLRGLLVLLVLLPL
HHHHHHCCCCCCHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVRTESYTSIEVLSVVVTMVMLSAAGRLAKVEGVREWTILPFALVSGACLLMDWTAWAWV
HHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCHHEEHHHHHHHH
PAFMPFIFLHVKRNERIPLLHWLVLEEKSRAQFERVISWFVDLPTLKEEVRERRVLTRLL
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ENRVLRRVDASRYVYGLRILRSNDSLDLILRLTVVALIVMWMSGGWYVGLVTPLFVGLTA
HHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LQLVPLFKRLEAISIVSWLPITRDERIVGYSWWAMRLLVIQAVVLMIASIAFGATWDAAV
HHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
GLVLSVMVTRYYLNRLK
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRFTARLGTWMEEVVKYSRYVANGGLLFTLYFTLIYGAFVYNNFLERIDGTFPGTWIAA
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
GVLLLMPLGHRPRTFIQEADQVFLLPELGDIRSYMVGVRLFNLVFASLRGLLVLLVLLPL
HHHHHHCCCCCCHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVRTESYTSIEVLSVVVTMVMLSAAGRLAKVEGVREWTILPFALVSGACLLMDWTAWAWV
HHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCHHEEHHHHHHHH
PAFMPFIFLHVKRNERIPLLHWLVLEEKSRAQFERVISWFVDLPTLKEEVRERRVLTRLL
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ENRVLRRVDASRYVYGLRILRSNDSLDLILRLTVVALIVMWMSGGWYVGLVTPLFVGLTA
HHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LQLVPLFKRLEAISIVSWLPITRDERIVGYSWWAMRLLVIQAVVLMIASIAFGATWDAAV
HHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
GLVLSVMVTRYYLNRLK
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8581172; 9579061; 9384377 [H]