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The map label for this gene is yhaM [H]

Identifier: 229918170

GI number: 229918170

Start: 2407724

End: 2408650

Strand: Direct

Name: yhaM [H]

Synonym: EAT1b_2450

Alternate gene names: 229918170

Gene position: 2407724-2408650 (Clockwise)

Preceding gene: 229918166

Following gene: 229918172

Centisome position: 80.26

GC content: 47.68

Gene sequence:

>927_bases
TTGACAACAAAAATCGGTCAGCTCAAAGTGGGCGACACGCTAGACCAATATGTCATGATCAAACAATCGTATAAGGGACT
TGCTGGGAACGGAAAACCTTATTTAACATTAATCCTTTGCGACGAGAGTGGTGAAATCGAAACGAAATTATGGGATAGTG
CCGATACTGAGAAGTATGCGACGAAAAAAATCGTCCATGCGGCCGGTGAAGTGATGGACTATCGCGGGCGCACCCAGTTG
AAATTAAAACAAATTTCAATCATCGAGCAGGAAGTGGATATCGCACCGTACGTCCGCTCAGCTCCCGTTCCGAAGTCAGA
GCTCGAGACGACGATTCGTGGATTCATTACGTCACTTCAACACGATGAGATTCGCCGTCTTGTCGAGGAAGTCGTCAATC
GTCACGAAGAGGCATACTTTACGTACCCGGCTGCCGTTCGACATCATCACGCGGTCTATTCAGGACTAGCATTTCATGTG
ATGTCGATGTTGAAGCTCGCGGATACGATGTGTGAACTGTATCCATCCTTGAATCGTGACCTTTTGATTGCAGGTGTGAT
TTTGCATGATTTGGCGAAAGTCATCGAATTGTCTGATGCGATTACGCCAGAATACACACTCGAAGGAAAATTACTCGGTC
ATTTGTCACTTATGGCATCGGAGCTTGAAGTCGTGTCACGGGAACTGGGAACGGACCGTGAAGTGACGACACTGTTGCAA
CATCTCGTCTTAAGCCATCACGGGAAGCCGGAATGGGGATCTGCGAATACGCCACAGTTGCCTGAAGCGGAGATGTTATT
CTTTATTGATAACATTGATGCGCGCATGAATATGTTTGAGAAAGCGTATGAAGGGGTCGAGCCGGGGACATTCACGGAGC
GTGTCATGGCACTCGATAACCGTGCCTTCTATCGCCCGAATCTATAA

Upstream 100 bases:

>100_bases
ATTCACTATATTGATAGTATTCCCAAATTATCAGGAATGTTGGCATCTGTCGCAAACTTTCGTTAAGATGAAAGTACTGA
ACAAGAGAGAGGTGCTTTCA

Downstream 100 bases:

>100_bases
CAGGTGACCAACGAAAAAGGGGTACTCCATTGCTGGAGTGCCCCTTTGTGATTACTGTTCAGTTGATTCTGCTGCAGGTT
CTTCTGAAGACTCGTCTGCG

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MTTKIGQLKVGDTLDQYVMIKQSYKGLAGNGKPYLTLILCDESGEIETKLWDSADTEKYATKKIVHAAGEVMDYRGRTQL
KLKQISIIEQEVDIAPYVRSAPVPKSELETTIRGFITSLQHDEIRRLVEEVVNRHEEAYFTYPAAVRHHHAVYSGLAFHV
MSMLKLADTMCELYPSLNRDLLIAGVILHDLAKVIELSDAITPEYTLEGKLLGHLSLMASELEVVSRELGTDREVTTLLQ
HLVLSHHGKPEWGSANTPQLPEAEMLFFIDNIDARMNMFEKAYEGVEPGTFTERVMALDNRAFYRPNL

Sequences:

>Translated_308_residues
MTTKIGQLKVGDTLDQYVMIKQSYKGLAGNGKPYLTLILCDESGEIETKLWDSADTEKYATKKIVHAAGEVMDYRGRTQL
KLKQISIIEQEVDIAPYVRSAPVPKSELETTIRGFITSLQHDEIRRLVEEVVNRHEEAYFTYPAAVRHHHAVYSGLAFHV
MSMLKLADTMCELYPSLNRDLLIAGVILHDLAKVIELSDAITPEYTLEGKLLGHLSLMASELEVVSRELGTDREVTTLLQ
HLVLSHHGKPEWGSANTPQLPEAEMLFFIDNIDARMNMFEKAYEGVEPGTFTERVMALDNRAFYRPNL
>Mature_307_residues
TTKIGQLKVGDTLDQYVMIKQSYKGLAGNGKPYLTLILCDESGEIETKLWDSADTEKYATKKIVHAAGEVMDYRGRTQLK
LKQISIIEQEVDIAPYVRSAPVPKSELETTIRGFITSLQHDEIRRLVEEVVNRHEEAYFTYPAAVRHHHAVYSGLAFHVM
SMLKLADTMCELYPSLNRDLLIAGVILHDLAKVIELSDAITPEYTLEGKLLGHLSLMASELEVVSRELGTDREVTTLLQH
LVLSHHGKPEWGSANTPQLPEAEMLFFIDNIDARMNMFEKAYEGVEPGTFTERVMALDNRAFYRPNL

Specific function: Shows a 3'-5' exoribonuclease activity [H]

COG id: COG3481

COG function: function code R; Predicted HD-superfamily hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yhaM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020873
- InterPro:   IPR003607
- InterPro:   IPR012340
- InterPro:   IPR004365 [H]

Pfam domain/function: PF01336 tRNA_anti [H]

EC number: NA

Molecular weight: Translated: 34807; Mature: 34676

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKIGQLKVGDTLDQYVMIKQSYKGLAGNGKPYLTLILCDESGEIETKLWDSADTEKYA
CCCCCCCEECCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHCCCCCCHHHHH
TKKIVHAAGEVMDYRGRTQLKLKQISIIEQEVDIAPYVRSAPVPKSELETTIRGFITSLQ
HHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHCC
HDEIRRLVEEVVNRHEEAYFTYPAAVRHHHAVYSGLAFHVMSMLKLADTMCELYPSLNRD
HHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LLIAGVILHDLAKVIELSDAITPEYTLEGKLLGHLSLMASELEVVSRELGTDREVTTLLQ
HHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
HLVLSHHGKPEWGSANTPQLPEAEMLFFIDNIDARMNMFEKAYEGVEPGTFTERVMALDN
HHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHCC
RAFYRPNL
CCCCCCCC
>Mature Secondary Structure 
TTKIGQLKVGDTLDQYVMIKQSYKGLAGNGKPYLTLILCDESGEIETKLWDSADTEKYA
CCCCCCEECCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHCCCCCCHHHHH
TKKIVHAAGEVMDYRGRTQLKLKQISIIEQEVDIAPYVRSAPVPKSELETTIRGFITSLQ
HHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHCC
HDEIRRLVEEVVNRHEEAYFTYPAAVRHHHAVYSGLAFHVMSMLKLADTMCELYPSLNRD
HHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LLIAGVILHDLAKVIELSDAITPEYTLEGKLLGHLSLMASELEVVSRELGTDREVTTLLQ
HHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
HLVLSHHGKPEWGSANTPQLPEAEMLFFIDNIDARMNMFEKAYEGVEPGTFTERVMALDN
HHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHCC
RAFYRPNL
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA