| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is 229918135
Identifier: 229918135
GI number: 229918135
Start: 2366091
End: 2366516
Strand: Direct
Name: 229918135
Synonym: EAT1b_2415
Alternate gene names: NA
Gene position: 2366091-2366516 (Clockwise)
Preceding gene: 229918134
Following gene: 229918136
Centisome position: 78.87
GC content: 50.7
Gene sequence:
>426_bases GTGAGACGATTTGATGTAGAGTCGACATATGATACGACGGTCGATTCACTATGGGATTTGTTACAGGATGCCTCGCTTTT GACGAAACTGACGAAGTTTCCTAAAGTACGCTTAGTAGGGGACGGCGCCTCGGTCGAAGGGAATGAAGTGAAGTTGTTCG TTGGGGTCGGTCCGGTGGAACTGCCGTGGAACAGTGCCATCACCGTTGTGGGAAACCAGGCATTCTGCGATCAAGGAAAG AGGTTACCGTTTCCGTTCAAACGGTTCACACATGTGCACCGGGTCGAGTCGCGTGATGGCAAGGCGGTCATGATCGACGA AGTGACGTTCGATAGCTATGTTCCGAACATACTCGTCGAGTATTTCGTGCTTCGTCCGATGTTCCAAGAACGGACGCGGG CCTTCCAAAAAACACTAAATTCATGA
Upstream 100 bases:
>100_bases CTTCCGACGGATGACGTCGTCTGGCTAGACGCTTCGGAGCGTGAGGTGAAGACGGTTTCTGTGGCTCAACAAAAATTAGA ACGATTGGCAGGTGGCGAAC
Downstream 100 bases:
>100_bases AAATAAGAGATTTCCTTTTTCATTGGTTCTGAAAGTCGCTATAATTAAATATGAGAATTGTATAGCATCATAGCGGAAAG GAGGAGCTTATGAGCTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MRRFDVESTYDTTVDSLWDLLQDASLLTKLTKFPKVRLVGDGASVEGNEVKLFVGVGPVELPWNSAITVVGNQAFCDQGK RLPFPFKRFTHVHRVESRDGKAVMIDEVTFDSYVPNILVEYFVLRPMFQERTRAFQKTLNS
Sequences:
>Translated_141_residues MRRFDVESTYDTTVDSLWDLLQDASLLTKLTKFPKVRLVGDGASVEGNEVKLFVGVGPVELPWNSAITVVGNQAFCDQGK RLPFPFKRFTHVHRVESRDGKAVMIDEVTFDSYVPNILVEYFVLRPMFQERTRAFQKTLNS >Mature_141_residues MRRFDVESTYDTTVDSLWDLLQDASLLTKLTKFPKVRLVGDGASVEGNEVKLFVGVGPVELPWNSAITVVGNQAFCDQGK RLPFPFKRFTHVHRVESRDGKAVMIDEVTFDSYVPNILVEYFVLRPMFQERTRAFQKTLNS
Specific function: Unknown
COG id: COG4276
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16118; Mature: 16118
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFDVESTYDTTVDSLWDLLQDASLLTKLTKFPKVRLVGDGASVEGNEVKLFVGVGPVE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEEEECCCEE LPWNSAITVVGNQAFCDQGKRLPFPFKRFTHVHRVESRDGKAVMIDEVTFDSYVPNILVE CCCCCEEEEECCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHH YFVLRPMFQERTRAFQKTLNS HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRRFDVESTYDTTVDSLWDLLQDASLLTKLTKFPKVRLVGDGASVEGNEVKLFVGVGPVE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEEEECCCEE LPWNSAITVVGNQAFCDQGKRLPFPFKRFTHVHRVESRDGKAVMIDEVTFDSYVPNILVE CCCCCEEEEECCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHH YFVLRPMFQERTRAFQKTLNS HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA