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The map label for this gene is yerC [H]

Identifier: 229917958

GI number: 229917958

Start: 2187754

End: 2188059

Strand: Direct

Name: yerC [H]

Synonym: EAT1b_2237

Alternate gene names: 229917958

Gene position: 2187754-2188059 (Clockwise)

Preceding gene: 229917957

Following gene: 229917959

Centisome position: 72.93

GC content: 44.77

Gene sequence:

>306_bases
ATGCAACTCGATAAATTACGAGGTCGAGAGCTTGATCAATTGTTTGAAGCGATTTTGAAGCTCGAGACACTCGAAGACTG
TTATCAATTATTCGAAGATTTAGCGACTGTTAATGAAATTCAAGCACTTGCGCAACGACTTGAAGTGGCGCGGCAAATTC
GTGAAGGAAACACGTATCACAAAATTGAGGATGCGACAGGCGCCTCAACGGCCACGATTTCACGTGTGAAGCGATGCTTG
AACTATGGGACAGGCGGATACGATCTCGCTCTTGAACGTCTACAACAAACAAAAGGTGACTCGTAA

Upstream 100 bases:

>100_bases
AAACAAGTACTATTTCCTGCGATTTTGCGATGAATAGTTGAGTCCAAGGCGCCCCTGCTTTAGAATGATAAAGAAGTATG
AGTAGAGAGGATGCTTGCGG

Downstream 100 bases:

>100_bases
GAGTCATCTTGTTTTTGATGGAGGGGAGGGGCGAGATGCAACAGAAATTCATGAAACGGAACTTACAATTGTTCTTTCGA
AATTTAACACCGGTTCAAAC

Product: TrpR like protein, YerC/YecD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MQLDKLRGRELDQLFEAILKLETLEDCYQLFEDLATVNEIQALAQRLEVARQIREGNTYHKIEDATGASTATISRVKRCL
NYGTGGYDLALERLQQTKGDS

Sequences:

>Translated_101_residues
MQLDKLRGRELDQLFEAILKLETLEDCYQLFEDLATVNEIQALAQRLEVARQIREGNTYHKIEDATGASTATISRVKRCL
NYGTGGYDLALERLQQTKGDS
>Mature_101_residues
MQLDKLRGRELDQLFEAILKLETLEDCYQLFEDLATVNEIQALAQRLEVARQIREGNTYHKIEDATGASTATISRVKRCL
NYGTGGYDLALERLQQTKGDS

Specific function: Unknown

COG id: COG4496

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000831
- InterPro:   IPR010921
- InterPro:   IPR013368 [H]

Pfam domain/function: PF01371 Trp_repressor [H]

EC number: NA

Molecular weight: Translated: 11464; Mature: 11464

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLDKLRGRELDQLFEAILKLETLEDCYQLFEDLATVNEIQALAQRLEVARQIREGNTYH
CCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
KIEDATGASTATISRVKRCLNYGTGGYDLALERLQQTKGDS
HHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQLDKLRGRELDQLFEAILKLETLEDCYQLFEDLATVNEIQALAQRLEVARQIREGNTYH
CCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
KIEDATGASTATISRVKRCLNYGTGGYDLALERLQQTKGDS
HHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969499; 9701819; 9384377 [H]