| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yeaD [H]
Identifier: 229917937
GI number: 229917937
Start: 2151572
End: 2152642
Strand: Direct
Name: yeaD [H]
Synonym: EAT1b_2216
Alternate gene names: 229917937
Gene position: 2151572-2152642 (Clockwise)
Preceding gene: 229917936
Following gene: 229917938
Centisome position: 71.72
GC content: 51.91
Gene sequence:
>1071_bases ATGAAAAACTGGATGAAGCTGTTCGTTGTATGGGCGGCGGCATTCGGATTGTATGCATTTGCCCGCATCGAAGGCAGTAT CGTCGCCTCAACATTATGGTGGTCGTTCGTCGTGTTGACCGTCTACTGGACGCTCTTTATGATTTATCCGGTCACGGCGG CAAACGTGTTGCGCCGTGTGACGACGAAGCGACTTGTTTCTGGACAAACGATGGACGTCGAGTTACGAATTGAACGGAAG TACCCTTTCTTGATTGGGATGGTCACGTTAGAGGAGCGATTGCCACAACGTTTGACGGATGAAGACAAGACGATTGTCGT GCCGGTGGACCGTTTTTTCCGGCAGGCTGAAGTCGTCCATTATGAGGTCGGGGCGATCAAGCGTGGGATTCATGTCTTTG ACCGCACCGTGCTCCATGTACGTGATGTGTTCGGTTTGTTCGACCGGAAGCGGACGTTGCGACTCGAAACGGTCGTCGAG GTGTCGCCTGCCGAATTGCCGTTTGATTTACCTCGAGACGAACATGTCGGAGGTCGTGGGGAACAATATCGTCAAATGCG GACGTATACCGAAGTGGCCAATACGACCAGCGGAGTTCGAGAGTATGCGGCAGGGGACCGAATCGGACGGATTGATTGGA AGGCATCCGCACGTCGAGGGAACTTGATGACCAAAACGTTTGACCAGGAACAAGAGAAGAAGCTCTCGCTCGTATTCGTG CCTGCCGTCTCTGCCGGGTATGAAGAGGCATTTGAACGTTCCCTGTCCTTACTTGTTGGAGCGATTCGTCAGTTAGAACG AAAAAATCTGCCGTTTGAGCTCTACGTCATTGAAGAGCAGGTGCGACTGTTCCATCTTCCCGACCAGAGTGCGGAAGTCG GCCATTACTTATTGACCGCCACGCCAGAAGCCGAGGGGCGTCTCGTCGAACGAGTGAAGCAAAATCTGCCTCAACAAACT GGAGATTTGATTTTGATCAGTCCGTTTGAAACGACGTCCATTCGAGAGTTGATGCATGAGACACAAGGTAGCTATCATCT CTACACGGCAGTAAATGAGGTGACGGTATGA
Upstream 100 bases:
>100_bases TGACAGCAGAAGCGCGGTACAAAGGAAAATCACCGAATCAGTTGATTCAAGAGTGGTTGGATACGTTGCCTGTCCCGATG GATCGTGAGGTCAATGAAGT
Downstream 100 bases:
>100_bases AGACATGGGTAATCCGAATCGTCTATACGGCGCTTGCCGCCTATTTGTTGTCGTTCTGGATTGAGCCGATTGTTGGAAGT ACGACGTTCGATGTGACGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MKNWMKLFVVWAAAFGLYAFARIEGSIVASTLWWSFVVLTVYWTLFMIYPVTAANVLRRVTTKRLVSGQTMDVELRIERK YPFLIGMVTLEERLPQRLTDEDKTIVVPVDRFFRQAEVVHYEVGAIKRGIHVFDRTVLHVRDVFGLFDRKRTLRLETVVE VSPAELPFDLPRDEHVGGRGEQYRQMRTYTEVANTTSGVREYAAGDRIGRIDWKASARRGNLMTKTFDQEQEKKLSLVFV PAVSAGYEEAFERSLSLLVGAIRQLERKNLPFELYVIEEQVRLFHLPDQSAEVGHYLLTATPEAEGRLVERVKQNLPQQT GDLILISPFETTSIRELMHETQGSYHLYTAVNEVTV
Sequences:
>Translated_356_residues MKNWMKLFVVWAAAFGLYAFARIEGSIVASTLWWSFVVLTVYWTLFMIYPVTAANVLRRVTTKRLVSGQTMDVELRIERK YPFLIGMVTLEERLPQRLTDEDKTIVVPVDRFFRQAEVVHYEVGAIKRGIHVFDRTVLHVRDVFGLFDRKRTLRLETVVE VSPAELPFDLPRDEHVGGRGEQYRQMRTYTEVANTTSGVREYAAGDRIGRIDWKASARRGNLMTKTFDQEQEKKLSLVFV PAVSAGYEEAFERSLSLLVGAIRQLERKNLPFELYVIEEQVRLFHLPDQSAEVGHYLLTATPEAEGRLVERVKQNLPQQT GDLILISPFETTSIRELMHETQGSYHLYTAVNEVTV >Mature_356_residues MKNWMKLFVVWAAAFGLYAFARIEGSIVASTLWWSFVVLTVYWTLFMIYPVTAANVLRRVTTKRLVSGQTMDVELRIERK YPFLIGMVTLEERLPQRLTDEDKTIVVPVDRFFRQAEVVHYEVGAIKRGIHVFDRTVLHVRDVFGLFDRKRTLRLETVVE VSPAELPFDLPRDEHVGGRGEQYRQMRTYTEVANTTSGVREYAAGDRIGRIDWKASARRGNLMTKTFDQEQEKKLSLVFV PAVSAGYEEAFERSLSLLVGAIRQLERKNLPFELYVIEEQVRLFHLPDQSAEVGHYLLTATPEAEGRLVERVKQNLPQQT GDLILISPFETTSIRELMHETQGSYHLYTAVNEVTV
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002881 [H]
Pfam domain/function: PF01882 DUF58 [H]
EC number: NA
Molecular weight: Translated: 41048; Mature: 41048
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNWMKLFVVWAAAFGLYAFARIEGSIVASTLWWSFVVLTVYWTLFMIYPVTAANVLRRV CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTKRLVSGQTMDVELRIERKYPFLIGMVTLEERLPQRLTDEDKTIVVPVDRFFRQAEVVH HHHHHHCCCEEEEEEEEECCCCEEEEEEEHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHE YEVGAIKRGIHVFDRTVLHVRDVFGLFDRKRTLRLETVVEVSPAELPFDLPRDEHVGGRG EHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCC EQYRQMRTYTEVANTTSGVREYAAGDRIGRIDWKASARRGNLMTKTFDQEQEKKLSLVFV HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHCCEEEEEE PAVSAGYEEAFERSLSLLVGAIRQLERKNLPFELYVIEEQVRLFHLPDQSAEVGHYLLTA ECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEECCCCCCCCCEEEEEE TPEAEGRLVERVKQNLPQQTGDLILISPFETTSIRELMHETQGSYHLYTAVNEVTV CCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEECCHHCC >Mature Secondary Structure MKNWMKLFVVWAAAFGLYAFARIEGSIVASTLWWSFVVLTVYWTLFMIYPVTAANVLRRV CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTKRLVSGQTMDVELRIERKYPFLIGMVTLEERLPQRLTDEDKTIVVPVDRFFRQAEVVH HHHHHHCCCEEEEEEEEECCCCEEEEEEEHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHE YEVGAIKRGIHVFDRTVLHVRDVFGLFDRKRTLRLETVVEVSPAELPFDLPRDEHVGGRG EHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCC EQYRQMRTYTEVANTTSGVREYAAGDRIGRIDWKASARRGNLMTKTFDQEQEKKLSLVFV HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHCCEEEEEE PAVSAGYEEAFERSLSLLVGAIRQLERKNLPFELYVIEEQVRLFHLPDQSAEVGHYLLTA ECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEECCCCCCCCCEEEEEE TPEAEGRLVERVKQNLPQQTGDLILISPFETTSIRELMHETQGSYHLYTAVNEVTV CCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEECCHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]