Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

Click here to switch to the map view.

The map label for this gene is 229917919

Identifier: 229917919

GI number: 229917919

Start: 2130074

End: 2130817

Strand: Direct

Name: 229917919

Synonym: EAT1b_2197

Alternate gene names: NA

Gene position: 2130074-2130817 (Clockwise)

Preceding gene: 229917918

Following gene: 229917921

Centisome position: 71.0

GC content: 47.85

Gene sequence:

>744_bases
GTGAGGATTGCGACGTATAACATTTGGAATCATGACACGCTATGGCAAAAACGAATCGATGCGATTTGCCAAGAAGTAAA
ACGAATCAACGCGGACGTGATTGCACTGCAAGAAGTCCGTTCTTATGAAAAAGGCAGTGTAGCTCATGATATTGCGGAAG
CGACGGGTTATCCGTACTGCGTCTTTCATGCTTACCCCGACTCACCGGACGAAGGACTCGCTTTTTTGAGTAAAGTCCCT
TTTTCTTCAGTTGAAGCGATTTGGGAAGAAGATGTGGAAGAGTCAAACTTTTGTGCGACCCGAGTGACGCTTATCTTCGG
CGGTCAGGAATGGGGACTCACGAATGTGCATCTGAACTGGCGCTCTTCTTCGATTCGAGAATGCCAGATGGAAGTGGTAC
GAGACTGGTTAAGCAAGGGGCACCAAAAGGCGATTGAGGTGTTGTGTGGGGATTTCAATGATCATCCTCAATCCACTATC
TATGATGATGTATCAGATGCAGGGTGGCTGGACGTGACGACGTTTGTTGGCGAAGAGGCACGCCCGACGTTAGACGTAAA
GCACAATCCATACCTACAATCTTCTCATCTCGAGCAACCTGAACGATATGATTGGATTCTGTTCCGTTCGGAATGGAGTG
AACTCGAGGTTCAGCATGTCGATGTATTCGGCGACATGCGGACGAGTAGGGATGTTGTACCGAGTGATCATTATGGTGTG
GTGGTCGACTTTACCGTGAAATAA

Upstream 100 bases:

>100_bases
ATATGGTCCGACTTGATGAGAACTATGTCACAGAACGTGAATTAAGAGAAGAACAAAAATGGGGGAGCGCGTGACTCACT
CGAGAAAGTAGGAATATGAA

Downstream 100 bases:

>100_bases
TGAGGAGGATGTGCGATTGCGCATCCTCTTTTTATTTGAATAGACGAGCGATGAACCCCACACATGCCGCAAAGGGAAGA
AGGAGAAGGAGTCCGAGCCA

Product: Endonuclease/exonuclease/phosphatase

Products: NA

Alternate protein names: Secreted Protein

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MRIATYNIWNHDTLWQKRIDAICQEVKRINADVIALQEVRSYEKGSVAHDIAEATGYPYCVFHAYPDSPDEGLAFLSKVP
FSSVEAIWEEDVEESNFCATRVTLIFGGQEWGLTNVHLNWRSSSIRECQMEVVRDWLSKGHQKAIEVLCGDFNDHPQSTI
YDDVSDAGWLDVTTFVGEEARPTLDVKHNPYLQSSHLEQPERYDWILFRSEWSELEVQHVDVFGDMRTSRDVVPSDHYGV
VVDFTVK

Sequences:

>Translated_247_residues
MRIATYNIWNHDTLWQKRIDAICQEVKRINADVIALQEVRSYEKGSVAHDIAEATGYPYCVFHAYPDSPDEGLAFLSKVP
FSSVEAIWEEDVEESNFCATRVTLIFGGQEWGLTNVHLNWRSSSIRECQMEVVRDWLSKGHQKAIEVLCGDFNDHPQSTI
YDDVSDAGWLDVTTFVGEEARPTLDVKHNPYLQSSHLEQPERYDWILFRSEWSELEVQHVDVFGDMRTSRDVVPSDHYGV
VVDFTVK
>Mature_247_residues
MRIATYNIWNHDTLWQKRIDAICQEVKRINADVIALQEVRSYEKGSVAHDIAEATGYPYCVFHAYPDSPDEGLAFLSKVP
FSSVEAIWEEDVEESNFCATRVTLIFGGQEWGLTNVHLNWRSSSIRECQMEVVRDWLSKGHQKAIEVLCGDFNDHPQSTI
YDDVSDAGWLDVTTFVGEEARPTLDVKHNPYLQSSHLEQPERYDWILFRSEWSELEVQHVDVFGDMRTSRDVVPSDHYGV
VVDFTVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28461; Mature: 28461

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIATYNIWNHDTLWQKRIDAICQEVKRINADVIALQEVRSYEKGSVAHDIAEATGYPYC
CEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHEEHHHHHCCCCCCHHHHHHHHCCCCEE
VFHAYPDSPDEGLAFLSKVPFSSVEAIWEEDVEESNFCATRVTLIFGGQEWGLTNVHLNW
EEECCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEEEEEEEC
RSSSIRECQMEVVRDWLSKGHQKAIEVLCGDFNDHPQSTIYDDVSDAGWLDVTTFVGEEA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEEHHHCCCCC
RPTLDVKHNPYLQSSHLEQPERYDWILFRSEWSELEVQHVDVFGDMRTSRDVVPSDHYGV
CCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEHHCCCCCCCCCCCCCCCE
VVDFTVK
EEEEEEC
>Mature Secondary Structure
MRIATYNIWNHDTLWQKRIDAICQEVKRINADVIALQEVRSYEKGSVAHDIAEATGYPYC
CEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHEEHHHHHCCCCCCHHHHHHHHCCCCEE
VFHAYPDSPDEGLAFLSKVPFSSVEAIWEEDVEESNFCATRVTLIFGGQEWGLTNVHLNW
EEECCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEEEEEEEC
RSSSIRECQMEVVRDWLSKGHQKAIEVLCGDFNDHPQSTIYDDVSDAGWLDVTTFVGEEA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEEHHHCCCCC
RPTLDVKHNPYLQSSHLEQPERYDWILFRSEWSELEVQHVDVFGDMRTSRDVVPSDHYGV
CCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEHHCCCCCCCCCCCCCCCE
VVDFTVK
EEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA