| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is 229917881
Identifier: 229917881
GI number: 229917881
Start: 2098432
End: 2098908
Strand: Direct
Name: 229917881
Synonym: EAT1b_2159
Alternate gene names: NA
Gene position: 2098432-2098908 (Clockwise)
Preceding gene: 229917880
Following gene: 229917886
Centisome position: 69.95
GC content: 49.27
Gene sequence:
>477_bases ATGAATAAACAAGAGCGTCTCCCCAAAATGGTCGAACAGGATCTCGACGCACGAGGGATCAGCACACTATTTGGCATCAT CGGCCTGTTTCTCTTTCTCGTTGTTTCGGTCATAAACGGTGTCACGGTGACGACGGTTGCCTTCTCTTTCCTCGTGACCC AATTGCCGATGCTTTATCAAGCGTGGCGACGGATGAAGTTGTTACGTACATTTAACGAAGACGAGGAATACCAACGTCTC GTTCGTCGAGAATTTCAAATCATCGTCGCCATGTTTGTGTCACTTGGTGTATTCACCTTCCTCACGTGGTTCGTATTCGA TTCGATGCAAGAACTACTCGGTGTCGCATTGATTGGCATCATTCCGCTTCTCATCTTGTACGTGTCGATGGACCGTAAAC TGCGTGAAGCGGACCCGGAGCATGTGACGAATCGGGAATTACGACGCGCACATCGAGAACAGAAACTCAGCCCCTGA
Upstream 100 bases:
>100_bases GCTTCGACCGTAAATTAAAAGAAATCGATCCGTTACACGTGACGGGTGTTGAACTCGGTCATGTCCAGCTGCAACGGAAA AAACGAAAAAGTGAAGCGTG
Downstream 100 bases:
>100_bases CACGCGTCAGAGGCTGAGTTTTTTCATGAGAACATCGGCAACGAGAAGACCGCAGACGACCATCCCGAGTGTATAGAATG TGAACCGGTGTCGTTCCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MNKQERLPKMVEQDLDARGISTLFGIIGLFLFLVVSVINGVTVTTVAFSFLVTQLPMLYQAWRRMKLLRTFNEDEEYQRL VRREFQIIVAMFVSLGVFTFLTWFVFDSMQELLGVALIGIIPLLILYVSMDRKLREADPEHVTNRELRRAHREQKLSP
Sequences:
>Translated_158_residues MNKQERLPKMVEQDLDARGISTLFGIIGLFLFLVVSVINGVTVTTVAFSFLVTQLPMLYQAWRRMKLLRTFNEDEEYQRL VRREFQIIVAMFVSLGVFTFLTWFVFDSMQELLGVALIGIIPLLILYVSMDRKLREADPEHVTNRELRRAHREQKLSP >Mature_158_residues MNKQERLPKMVEQDLDARGISTLFGIIGLFLFLVVSVINGVTVTTVAFSFLVTQLPMLYQAWRRMKLLRTFNEDEEYQRL VRREFQIIVAMFVSLGVFTFLTWFVFDSMQELLGVALIGIIPLLILYVSMDRKLREADPEHVTNRELRRAHREQKLSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18481; Mature: 18481
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKQERLPKMVEQDLDARGISTLFGIIGLFLFLVVSVINGVTVTTVAFSFLVTQLPMLYQ CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AWRRMKLLRTFNEDEEYQRLVRREFQIIVAMFVSLGVFTFLTWFVFDSMQELLGVALIGI HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPLLILYVSMDRKLREADPEHVTNRELRRAHREQKLSP HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNKQERLPKMVEQDLDARGISTLFGIIGLFLFLVVSVINGVTVTTVAFSFLVTQLPMLYQ CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AWRRMKLLRTFNEDEEYQRLVRREFQIIVAMFVSLGVFTFLTWFVFDSMQELLGVALIGI HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPLLILYVSMDRKLREADPEHVTNRELRRAHREQKLSP HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA