| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917874
Identifier: 229917874
GI number: 229917874
Start: 2094392
End: 2095369
Strand: Direct
Name: 229917874
Synonym: EAT1b_2152
Alternate gene names: NA
Gene position: 2094392-2095369 (Clockwise)
Preceding gene: 229917873
Following gene: 229917875
Centisome position: 69.82
GC content: 49.69
Gene sequence:
>978_bases ATGTACACAGAACTACTAGAAGAATCGAGGAAGACATTCATGTTAGCTATTATGATTGGATTGACGATTGGGATTTTATT GCCGATGCAGACGAGTGTCAACTCACGTTTGCGTCAGGTGGTCGGCTCCCCGTTCGTTGCATCTTTTTTATCGTTTACTG TCGGGACGATCTTTTTGTCCTTATTGCTCTTATTGACCGGACAGTCATTCGGATTTGACGGCTCGGTGATTCAGGAAGGT CCGGGTTGGATGTGGATTGGCGGACTGTTAGGGGTCTTGTTCTTAACGGGAAATATTTTGCTGTTCCCAAGACTCGGGAG TGTCCAGACGGTCATCATGCCGATTTTTGGACAGATTTTGATGGGGTTGTTGATTGACCATTTCGGTTGGTTCAATTCTG TAGAACACCCAATTACGGCGCTTCGTTTGTTCGGAGTCGTGCTCGTCTTGTTCGGAGTCATCGGAACGGTCGCCTTATCC GATTGGCTCAACCGCCGAAGAGGCAAACTGGTCGTCTCCATGGAAACGGACACGGGGAATCTGAACCTTTGGCGACTGTT CGGGATTTTCACAGGGATGATGAGTGCCACGCAAACGGCCATTAACGGCTATTTGGGAACAGTGCTCGAATCGGCTCTGA AAGGGGCATTGGTCTCTTTCGTTGTCGGAACCTTGGCGCTCTTACTCATTTTACTCGTCTCACGCCAACCAGTTCCGATC GGTCAACTGAAAGGTCAACCGTGGTGGATTTGGCTCGGTGGGATCATCGGGGCGCTCTTCATCGGAGGAAACGTCCTCAT CGTACCGATTGTCGGGACAGGAATCGCTGTCATCATCGTCATCGTCGGACTGTTATGCGGTAGCTTGCTCATCGACCGCT TCGGTTGGTTCGGCGCGAAGAAAAATCCGGTCACCGTGGTACAACTCATCAGTCTGGTTGTCATGGTGATTGGGATTGTA TTGATTCGTTTATCTTAA
Upstream 100 bases:
>100_bases CAACGCTTCCGTGAGTCCAAAACGAACACCTGAGAAGGGTTCGTTTTTTGTTTGAGGACATCGGTCCTTTTCTTCTTCGG TACGGAGGCGTAAGCTGACA
Downstream 100 bases:
>100_bases GGGGGGAGAACGATGCGAGGAGTGCTGTTCGCCATGAGTGGGGGATTCTTTCTCACGTTGCAAAGTGTCGCTAACGCCCG AATCAGTTCACAGATTGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Orotate Transporter; Glycyl-TRNA Synthetase; Glycyl-TRNA Synthetase Beta Subunit
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MYTELLEESRKTFMLAIMIGLTIGILLPMQTSVNSRLRQVVGSPFVASFLSFTVGTIFLSLLLLLTGQSFGFDGSVIQEG PGWMWIGGLLGVLFLTGNILLFPRLGSVQTVIMPIFGQILMGLLIDHFGWFNSVEHPITALRLFGVVLVLFGVIGTVALS DWLNRRRGKLVVSMETDTGNLNLWRLFGIFTGMMSATQTAINGYLGTVLESALKGALVSFVVGTLALLLILLVSRQPVPI GQLKGQPWWIWLGGIIGALFIGGNVLIVPIVGTGIAVIIVIVGLLCGSLLIDRFGWFGAKKNPVTVVQLISLVVMVIGIV LIRLS
Sequences:
>Translated_325_residues MYTELLEESRKTFMLAIMIGLTIGILLPMQTSVNSRLRQVVGSPFVASFLSFTVGTIFLSLLLLLTGQSFGFDGSVIQEG PGWMWIGGLLGVLFLTGNILLFPRLGSVQTVIMPIFGQILMGLLIDHFGWFNSVEHPITALRLFGVVLVLFGVIGTVALS DWLNRRRGKLVVSMETDTGNLNLWRLFGIFTGMMSATQTAINGYLGTVLESALKGALVSFVVGTLALLLILLVSRQPVPI GQLKGQPWWIWLGGIIGALFIGGNVLIVPIVGTGIAVIIVIVGLLCGSLLIDRFGWFGAKKNPVTVVQLISLVVMVIGIV LIRLS >Mature_325_residues MYTELLEESRKTFMLAIMIGLTIGILLPMQTSVNSRLRQVVGSPFVASFLSFTVGTIFLSLLLLLTGQSFGFDGSVIQEG PGWMWIGGLLGVLFLTGNILLFPRLGSVQTVIMPIFGQILMGLLIDHFGWFNSVEHPITALRLFGVVLVLFGVIGTVALS DWLNRRRGKLVVSMETDTGNLNLWRLFGIFTGMMSATQTAINGYLGTVLESALKGALVSFVVGTLALLLILLVSRQPVPI GQLKGQPWWIWLGGIIGALFIGGNVLIVPIVGTGIAVIIVIVGLLCGSLLIDRFGWFGAKKNPVTVVQLISLVVMVIGIV LIRLS
Specific function: Unknown
COG id: COG3238
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35065; Mature: 35065
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTELLEESRKTFMLAIMIGLTIGILLPMQTSVNSRLRQVVGSPFVASFLSFTVGTIFLS CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LLLLLTGQSFGFDGSVIQEGPGWMWIGGLLGVLFLTGNILLFPRLGSVQTVIMPIFGQIL HHHHHCCCCCCCCCCCEECCCCEEEHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHH MGLLIDHFGWFNSVEHPITALRLFGVVLVLFGVIGTVALSDWLNRRRGKLVVSMETDTGN HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC LNLWRLFGIFTGMMSATQTAINGYLGTVLESALKGALVSFVVGTLALLLILLVSRQPVPI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH GQLKGQPWWIWLGGIIGALFIGGNVLIVPIVGTGIAVIIVIVGLLCGSLLIDRFGWFGAK HHCCCCCCEEEHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KNPVTVVQLISLVVMVIGIVLIRLS CCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYTELLEESRKTFMLAIMIGLTIGILLPMQTSVNSRLRQVVGSPFVASFLSFTVGTIFLS CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LLLLLTGQSFGFDGSVIQEGPGWMWIGGLLGVLFLTGNILLFPRLGSVQTVIMPIFGQIL HHHHHCCCCCCCCCCCEECCCCEEEHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHH MGLLIDHFGWFNSVEHPITALRLFGVVLVLFGVIGTVALSDWLNRRRGKLVVSMETDTGN HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC LNLWRLFGIFTGMMSATQTAINGYLGTVLESALKGALVSFVVGTLALLLILLVSRQPVPI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH GQLKGQPWWIWLGGIIGALFIGGNVLIVPIVGTGIAVIIVIVGLLCGSLLIDRFGWFGAK HHCCCCCCEEEHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KNPVTVVQLISLVVMVIGIVLIRLS CCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA