| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917866
Identifier: 229917866
GI number: 229917866
Start: 2089060
End: 2090091
Strand: Direct
Name: 229917866
Synonym: EAT1b_2144
Alternate gene names: NA
Gene position: 2089060-2090091 (Clockwise)
Preceding gene: 229917864
Following gene: 229917869
Centisome position: 69.64
GC content: 53.49
Gene sequence:
>1032_bases ATGAAATCAATCGCCATCATCGGAGCTGGTGTCAGTGGGCTTTATGCCGCGAGCGAGCTTCATCAAAAAAGATATGACGT CACGGTCTTCGAGGCACGTGACCGAGTTGGCGGACGCATCTTGACGAAGGAAGGATTTGACCTCGGTCCGACATGGTATT GGCCCGATACGGAGAAAACGATTTCGGAACTCGTGGATACACTGGGACTCGAGTCATTCCTTCAACATACGACAGGGGAG ATGGTGCTCGAACGCCAGACGACGACTGCGCCGGAACGACATGTGCTACCGGAGGAAAGCATCGTCAGATCGAAACGTGT AGTCGGCGGGATGACGAGTCTAGTGGAAGCATTATATGCGAAGTTGCCCGATGACATCGTTCGGCTTGGGCATCGCCTCA CGTCCATTGACCGACAGTCGGACCGAGTCCAACTGACGTTTCAAAATGGTTCGGTGTATCACACGGATGACGTGATCCTT GCGATTCCACCTCGTCTCGTTGCGGAAGTGGCAATTGAACCGGCATTGTCAGCGCAAACGCGAAAAGCGCTCAAAACGAC TCCCACATGGATGGCTTCTCAGGCGAAAGCGCTCATCGTATACGAGACACCGTTCTGGCGAGAAGAAGGTCTGTCTGGCT TTGGGATGAGCTGGGTCGGTCCACTTCAAGAGATTCATGACGCTTCTCTGAAAGATGGACCAGGTGCGCTGTTCGGATTT TTCCGTCTGTCACCGGGAGAACGGGAAGCGTTAGGAGAAGGACAAGTAAAGACGCGCGTCATCGAACAACTGGAGAAGCT GTATGGTCCGAAAGCGAATGACTTCTTGCGATTTCATTACATGGACTGGTCGACAGAATCAGAGACAGCGACATCTGACG ACTTCCTGCCGCTCACGGCATTCCCGGCTTACGGTCCGATTGAGCTCGGAGACCGTCTCCATTTGATTGGTTCGGAGACG GATGCGCAGTTCGGGGGACATATCGAAGGGGCATTGCGGTCGGCGAATCGAATCGTACAAGGGTTGGTATAA
Upstream 100 bases:
>100_bases ATAGAACATATTTTTCAATTGATGTCGTCCTTTCTAGAACAGATACAATCATCTAACTCAGTATAATCGAGGAGAGACGG ACGACAAAGGAGAATTTACA
Downstream 100 bases:
>100_bases CGAAAAGACAAATCGTCCGACTAGCGGTGATTTGTCTTTTTTATTTGAATTTCTGAATCATCAACGCTAGCGAACGGTTG ATCATCTTCATCTCGTCATC
Product: amine oxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MKSIAIIGAGVSGLYAASELHQKRYDVTVFEARDRVGGRILTKEGFDLGPTWYWPDTEKTISELVDTLGLESFLQHTTGE MVLERQTTTAPERHVLPEESIVRSKRVVGGMTSLVEALYAKLPDDIVRLGHRLTSIDRQSDRVQLTFQNGSVYHTDDVIL AIPPRLVAEVAIEPALSAQTRKALKTTPTWMASQAKALIVYETPFWREEGLSGFGMSWVGPLQEIHDASLKDGPGALFGF FRLSPGEREALGEGQVKTRVIEQLEKLYGPKANDFLRFHYMDWSTESETATSDDFLPLTAFPAYGPIELGDRLHLIGSET DAQFGGHIEGALRSANRIVQGLV
Sequences:
>Translated_343_residues MKSIAIIGAGVSGLYAASELHQKRYDVTVFEARDRVGGRILTKEGFDLGPTWYWPDTEKTISELVDTLGLESFLQHTTGE MVLERQTTTAPERHVLPEESIVRSKRVVGGMTSLVEALYAKLPDDIVRLGHRLTSIDRQSDRVQLTFQNGSVYHTDDVIL AIPPRLVAEVAIEPALSAQTRKALKTTPTWMASQAKALIVYETPFWREEGLSGFGMSWVGPLQEIHDASLKDGPGALFGF FRLSPGEREALGEGQVKTRVIEQLEKLYGPKANDFLRFHYMDWSTESETATSDDFLPLTAFPAYGPIELGDRLHLIGSET DAQFGGHIEGALRSANRIVQGLV >Mature_343_residues MKSIAIIGAGVSGLYAASELHQKRYDVTVFEARDRVGGRILTKEGFDLGPTWYWPDTEKTISELVDTLGLESFLQHTTGE MVLERQTTTAPERHVLPEESIVRSKRVVGGMTSLVEALYAKLPDDIVRLGHRLTSIDRQSDRVQLTFQNGSVYHTDDVIL AIPPRLVAEVAIEPALSAQTRKALKTTPTWMASQAKALIVYETPFWREEGLSGFGMSWVGPLQEIHDASLKDGPGALFGF FRLSPGEREALGEGQVKTRVIEQLEKLYGPKANDFLRFHYMDWSTESETATSDDFLPLTAFPAYGPIELGDRLHLIGSET DAQFGGHIEGALRSANRIVQGLV
Specific function: Unknown
COG id: COG1231
COG function: function code E; Monoamine oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flavin monoamine oxidase family [H]
Homologues:
Organism=Homo sapiens, GI4557735, Length=252, Percent_Identity=25.3968253968254, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001613 - InterPro: IPR002937 [H]
Pfam domain/function: PF01593 Amino_oxidase [H]
EC number: NA
Molecular weight: Translated: 37986; Mature: 37986
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIAIIGAGVSGLYAASELHQKRYDVTVFEARDRVGGRILTKEGFDLGPTWYWPDTEKT CCCEEEEECCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEECCCCCCCCEEECCCHHHH ISELVDTLGLESFLQHTTGEMVLERQTTTAPERHVLPEESIVRSKRVVGGMTSLVEALYA HHHHHHHHCHHHHHHHCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KLPDDIVRLGHRLTSIDRQSDRVQLTFQNGSVYHTDDVILAIPPRLVAEVAIEPALSAQT HCCHHHHHHHHHHHHCCCCCCEEEEEEECCCEEECCCEEEEECHHHHHHHHHCCHHHHHH RKALKTTPTWMASQAKALIVYETPFWREEGLSGFGMSWVGPLQEIHDASLKDGPGALFGF HHHHHCCCHHHHCCCCEEEEEECCCCHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEE FRLSPGEREALGEGQVKTRVIEQLEKLYGPKANDFLRFHYMDWSTESETATSDDFLPLTA EECCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEC FPAYGPIELGDRLHLIGSETDAQFGGHIEGALRSANRIVQGLV CCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKSIAIIGAGVSGLYAASELHQKRYDVTVFEARDRVGGRILTKEGFDLGPTWYWPDTEKT CCCEEEEECCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEECCCCCCCCEEECCCHHHH ISELVDTLGLESFLQHTTGEMVLERQTTTAPERHVLPEESIVRSKRVVGGMTSLVEALYA HHHHHHHHCHHHHHHHCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KLPDDIVRLGHRLTSIDRQSDRVQLTFQNGSVYHTDDVILAIPPRLVAEVAIEPALSAQT HCCHHHHHHHHHHHHCCCCCCEEEEEEECCCEEECCCEEEEECHHHHHHHHHCCHHHHHH RKALKTTPTWMASQAKALIVYETPFWREEGLSGFGMSWVGPLQEIHDASLKDGPGALFGF HHHHHCCCHHHHCCCCEEEEEECCCCHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEE FRLSPGEREALGEGQVKTRVIEQLEKLYGPKANDFLRFHYMDWSTESETATSDDFLPLTA EECCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEC FPAYGPIELGDRLHLIGSETDAQFGGHIEGALRSANRIVQGLV CCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]