| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917852
Identifier: 229917852
GI number: 229917852
Start: 2079277
End: 2081094
Strand: Direct
Name: 229917852
Synonym: EAT1b_2130
Alternate gene names: NA
Gene position: 2079277-2081094 (Clockwise)
Preceding gene: 229917851
Following gene: 229917853
Centisome position: 69.31
GC content: 44.72
Gene sequence:
>1818_bases TTGAAAAAACAGTTGGAGCGATTGGCTCATCCAAATTACATGATGAACCGTGGAAAGTTCCGCTCGAAACAGGCGCATCC AAAGTCTACAAGTGGGCTGCTCATTTATCCGGCATTAGATCTCAATGTGAATGTATCTGAGACGGCTGAAATTGTATTCG GATTCGATTTGACTCATCAATTTGAATACCGTGAAAACTTATTGCAGCAGATTAAGCGTGATCCGAAATCCGTATCTGCA GGGATGCGCGTCATCGATTCGACTCACCCGAAATCGTATGAGTACGAATTTGTAGAGGTCGCACCATACCGAGCAAATGA AGTGAGCCCGATTATGAGGTGTTCGATCATTGATTATTTCGCAAAGAAAGATCCGAAACGAGTCATAGAACCAGACGCTC TCGTCGTACACGTCAAAGATCGAAACAATCAGATCCTTATCTACTTACCTGAGCAACTGAAACAGAGTTGTTCCTTTGAG ACGATTCCAGCTAGACATCTCGGTGCAGTCAGCCGCATCATCAAATTGTCACCTGACGCACGCATGTCGAAACTTATGCC GGAAGCGCTCGCGTTAATTGGTCGTCTCCCAATGCTTCAGTTTGAGCGACAAGATGTACGAGCAGCTCGTCTTGGTTACT CAATTCAAACGTTGCCTTCGCCACGTCTCCGATTCGGTAAAGGGAGGACCACGAGTTATGCAAAAACTGGCTTAAAGCAA GGTGGTGTATATGAAACAGGAGAGGCGACCGTCAGTTTCTTTGTCGACCCGAAATTACGAGATCATCAAAAACTGCAAGT CCTAGAGTTTATCAATAAACTAAAAACTACCTCTGAGCGCTTTGGGGTGACCCTCAATGTCTCGCATAAACCAAAAGGAT TGAGCCAGAAACTACCTTCTGATTTGTTGCAGACAGAAGATATTCTATACCAACTAAAGAATATCCCTCAACATTTTGAA GGTGTCGTCGTTGTCATTGCCGAGGAAGCATCGCTCCAACATTCATATCAAGCCATCAAAAGGCAATTTGGCGGGAAGCA GGATGTGGTGACGCAATGCGTCGAGTTACATGACCGTGTATTGAATTCTGAGGACACGCTATACAACATTCTACTGGGGA TTTACGTGAAGGCAGGTCTACAACCCTGGATTCTTGGTGAGCCACTCCATTCGGATTGTTTTGTCGGATTAGACGTAAGT CATGAGAATGGTAAACATGCAGCAGGCATCATTCAAATCATTGGGAAAGACGGGGCGATGATTAAGCAGAAAGCACTCTC GACAAGTGAAGCGGGGGAGAAAATCAGTTCTGAGACGATGAGAGAGATTGTCTATGATACATTACATGCATTTGAAGAAC AGTACGGACATGCCCCTAAGCATATCACGTTCCATCGAGATGGATTTGGGCGTGAAGATTTGACTCTTATTGATTCAATT CTATCTCCGCGTGAAATTCAATTCGACTACGTGGAAATTTTGAAGAATATCAATCGACGGATGGCGATTCATGAAGATGA GTGGAAAACTTCACAGGGACTCAGTTATACCAAAGAGCGCATGGGCTATCTCCTCTCGACGAATCCTCATGCGCGTGTCG GGATGGCAAAACCACTCAAAGTCGTACAACAAACAACGACCTTGCCGTTTGAAGCCATTTTGACAGATGTCTATCGCTTA TCGTTCATGCACGTCCACTCGCTATTGAAAACAAGACTGCCAATCACAACGCATTATGCAGATTTAAGTTCGACGTTCCA TAACCGTGGCTTGCTCAATGCGAATACAGAACATGAAGAGGCATTGCCGTTTGTATAA
Upstream 100 bases:
>100_bases TGAGGAAATCAAACAATGGGGAGACGAGACGTTTCTTCAATATGAGGCGCGTCCGATCAGTCCATCACGGAATGTCGAGC GAACATTACTTGAACGTCTG
Downstream 100 bases:
>100_bases CATGTAAAGTTGAAAGTTGTCATATCGTTATTATCAGTATTCCTGTTTGTCGAATATTGGGTATCATATCATTGAACTGA GATTACACTAGGAGGTAGAG
Product: stem cell self-renewal protein Piwi domain protein
Products: NA
Alternate protein names: Argonaute
Number of amino acids: Translated: 605; Mature: 605
Protein sequence:
>605_residues MKKQLERLAHPNYMMNRGKFRSKQAHPKSTSGLLIYPALDLNVNVSETAEIVFGFDLTHQFEYRENLLQQIKRDPKSVSA GMRVIDSTHPKSYEYEFVEVAPYRANEVSPIMRCSIIDYFAKKDPKRVIEPDALVVHVKDRNNQILIYLPEQLKQSCSFE TIPARHLGAVSRIIKLSPDARMSKLMPEALALIGRLPMLQFERQDVRAARLGYSIQTLPSPRLRFGKGRTTSYAKTGLKQ GGVYETGEATVSFFVDPKLRDHQKLQVLEFINKLKTTSERFGVTLNVSHKPKGLSQKLPSDLLQTEDILYQLKNIPQHFE GVVVVIAEEASLQHSYQAIKRQFGGKQDVVTQCVELHDRVLNSEDTLYNILLGIYVKAGLQPWILGEPLHSDCFVGLDVS HENGKHAAGIIQIIGKDGAMIKQKALSTSEAGEKISSETMREIVYDTLHAFEEQYGHAPKHITFHRDGFGREDLTLIDSI LSPREIQFDYVEILKNINRRMAIHEDEWKTSQGLSYTKERMGYLLSTNPHARVGMAKPLKVVQQTTTLPFEAILTDVYRL SFMHVHSLLKTRLPITTHYADLSSTFHNRGLLNANTEHEEALPFV
Sequences:
>Translated_605_residues MKKQLERLAHPNYMMNRGKFRSKQAHPKSTSGLLIYPALDLNVNVSETAEIVFGFDLTHQFEYRENLLQQIKRDPKSVSA GMRVIDSTHPKSYEYEFVEVAPYRANEVSPIMRCSIIDYFAKKDPKRVIEPDALVVHVKDRNNQILIYLPEQLKQSCSFE TIPARHLGAVSRIIKLSPDARMSKLMPEALALIGRLPMLQFERQDVRAARLGYSIQTLPSPRLRFGKGRTTSYAKTGLKQ GGVYETGEATVSFFVDPKLRDHQKLQVLEFINKLKTTSERFGVTLNVSHKPKGLSQKLPSDLLQTEDILYQLKNIPQHFE GVVVVIAEEASLQHSYQAIKRQFGGKQDVVTQCVELHDRVLNSEDTLYNILLGIYVKAGLQPWILGEPLHSDCFVGLDVS HENGKHAAGIIQIIGKDGAMIKQKALSTSEAGEKISSETMREIVYDTLHAFEEQYGHAPKHITFHRDGFGREDLTLIDSI LSPREIQFDYVEILKNINRRMAIHEDEWKTSQGLSYTKERMGYLLSTNPHARVGMAKPLKVVQQTTTLPFEAILTDVYRL SFMHVHSLLKTRLPITTHYADLSSTFHNRGLLNANTEHEEALPFV >Mature_605_residues MKKQLERLAHPNYMMNRGKFRSKQAHPKSTSGLLIYPALDLNVNVSETAEIVFGFDLTHQFEYRENLLQQIKRDPKSVSA GMRVIDSTHPKSYEYEFVEVAPYRANEVSPIMRCSIIDYFAKKDPKRVIEPDALVVHVKDRNNQILIYLPEQLKQSCSFE TIPARHLGAVSRIIKLSPDARMSKLMPEALALIGRLPMLQFERQDVRAARLGYSIQTLPSPRLRFGKGRTTSYAKTGLKQ GGVYETGEATVSFFVDPKLRDHQKLQVLEFINKLKTTSERFGVTLNVSHKPKGLSQKLPSDLLQTEDILYQLKNIPQHFE GVVVVIAEEASLQHSYQAIKRQFGGKQDVVTQCVELHDRVLNSEDTLYNILLGIYVKAGLQPWILGEPLHSDCFVGLDVS HENGKHAAGIIQIIGKDGAMIKQKALSTSEAGEKISSETMREIVYDTLHAFEEQYGHAPKHITFHRDGFGREDLTLIDSI LSPREIQFDYVEILKNINRRMAIHEDEWKTSQGLSYTKERMGYLLSTNPHARVGMAKPLKVVQQTTTLPFEAILTDVYRL SFMHVHSLLKTRLPITTHYADLSSTFHNRGLLNANTEHEEALPFV
Specific function: Unknown
COG id: COG1431
COG function: function code J; Uncharacterized protein containing piwi/argonaute domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68770; Mature: 68770
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: PS50822 PIWI
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQLERLAHPNYMMNRGKFRSKQAHPKSTSGLLIYPALDLNVNVSETAEIVFGFDLTHQ CCHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCHH FEYRENLLQQIKRDPKSVSAGMRVIDSTHPKSYEYEFVEVAPYRANEVSPIMRCSIIDYF HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHH AKKDPKRVIEPDALVVHVKDRNNQILIYLPEQLKQSCSFETIPARHLGAVSRIIKLSPDA HCCCCCCCCCCCEEEEEEECCCCEEEEEECHHHHHCCCCCCCCHHHHHHHHHHHHCCCCH RMSKLMPEALALIGRLPMLQFERQDVRAARLGYSIQTLPSPRLRFGKGRTTSYAKTGLKQ HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCHHHHHCCCC GGVYETGEATVSFFVDPKLRDHQKLQVLEFINKLKTTSERFGVTLNVSHKPKGLSQKLPS CCCEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCHHHHCCH DLLQTEDILYQLKNIPQHFEGVVVVIAEEASLQHSYQAIKRQFGGKQDVVTQCVELHDRV HHHHHHHHHHHHHCCCHHCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LNSEDTLYNILLGIYVKAGLQPWILGEPLHSDCFVGLDVSHENGKHAAGIIQIIGKDGAM CCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCH IKQKALSTSEAGEKISSETMREIVYDTLHAFEEQYGHAPKHITFHRDGFGREDLTLIDSI HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHH LSPREIQFDYVEILKNINRRMAIHEDEWKTSQGLSYTKERMGYLLSTNPHARVGMAKPLK CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCEEECCCCCCCCCCHHHHH VVQQTTTLPFEAILTDVYRLSFMHVHSLLKTRLPITTHYADLSSTFHNRGLLNANTEHEE HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCCCCCCC ALPFV CCCCC >Mature Secondary Structure MKKQLERLAHPNYMMNRGKFRSKQAHPKSTSGLLIYPALDLNVNVSETAEIVFGFDLTHQ CCHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCHH FEYRENLLQQIKRDPKSVSAGMRVIDSTHPKSYEYEFVEVAPYRANEVSPIMRCSIIDYF HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHH AKKDPKRVIEPDALVVHVKDRNNQILIYLPEQLKQSCSFETIPARHLGAVSRIIKLSPDA HCCCCCCCCCCCEEEEEEECCCCEEEEEECHHHHHCCCCCCCCHHHHHHHHHHHHCCCCH RMSKLMPEALALIGRLPMLQFERQDVRAARLGYSIQTLPSPRLRFGKGRTTSYAKTGLKQ HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCHHHHHCCCC GGVYETGEATVSFFVDPKLRDHQKLQVLEFINKLKTTSERFGVTLNVSHKPKGLSQKLPS CCCEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCHHHHCCH DLLQTEDILYQLKNIPQHFEGVVVVIAEEASLQHSYQAIKRQFGGKQDVVTQCVELHDRV HHHHHHHHHHHHHCCCHHCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LNSEDTLYNILLGIYVKAGLQPWILGEPLHSDCFVGLDVSHENGKHAAGIIQIIGKDGAM CCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCH IKQKALSTSEAGEKISSETMREIVYDTLHAFEEQYGHAPKHITFHRDGFGREDLTLIDSI HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHH LSPREIQFDYVEILKNINRRMAIHEDEWKTSQGLSYTKERMGYLLSTNPHARVGMAKPLK CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCEEECCCCCCCCCCHHHHH VVQQTTTLPFEAILTDVYRLSFMHVHSLLKTRLPITTHYADLSSTFHNRGLLNANTEHEE HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCCCCCCC ALPFV CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA