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The map label for this gene is groS

Identifier: 229917842

GI number: 229917842

Start: 2069250

End: 2069534

Strand: Direct

Name: groS

Synonym: EAT1b_2120

Alternate gene names: 229917842

Gene position: 2069250-2069534 (Clockwise)

Preceding gene: 229917839

Following gene: 229917843

Centisome position: 68.98

GC content: 49.47

Gene sequence:

>285_bases
ATGTTAAAACCACTAGGCGATCGTGTCATCATCGAAGTCGTGGAGAAAGAAGAAAAGACGATCGGGGGCATCGTGCTTCC
TGATACGGCGAAAGAAAAGCCGCAACAAGGGAAAGTCGTCGCAGTCGGAACAGGCCGCGTGACGGACGAAGGCAAGCGCA
TCGATCTCGACGTGAAAGAAAATGATTTGGTCATCTACTCGAAGTACGCAGGTACCGAAGTGAAGCATGATGGAAAAGAG
TACTTAATCGTTCGCGAGAGCGATATTCTCGCAATCGTAGGCTAA

Upstream 100 bases:

>100_bases
CTACACATACTACACTAATCAGTGTTAGCACTCCTTTTAACTGAGTGCTAAAACCTTACGATACACATTACATCATTCAT
ATTCGGAGGAGGGTTTTTCC

Downstream 100 bases:

>100_bases
GCACCATTATTCAAAAACTTTTTTAGGGGGAAATGAACGATGGCAAAAGATATTAAATTCTCAGAAGATGCACGTCACGC
GATGCTTCGCGGCGTCGACG

Product: chaperonin Cpn10

Products: NA

Alternate protein names: GroES protein; Protein Cpn10

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MLKPLGDRVIIEVVEKEEKTIGGIVLPDTAKEKPQQGKVVAVGTGRVTDEGKRIDLDVKENDLVIYSKYAGTEVKHDGKE
YLIVRESDILAIVG

Sequences:

>Translated_94_residues
MLKPLGDRVIIEVVEKEEKTIGGIVLPDTAKEKPQQGKVVAVGTGRVTDEGKRIDLDVKENDLVIYSKYAGTEVKHDGKE
YLIVRESDILAIVG
>Mature_94_residues
MLKPLGDRVIIEVVEKEEKTIGGIVLPDTAKEKPQQGKVVAVGTGRVTDEGKRIDLDVKENDLVIYSKYAGTEVKHDGKE
YLIVRESDILAIVG

Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter

COG id: COG0234

COG function: function code O; Co-chaperonin GroES (HSP10)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GroES chaperonin family

Homologues:

Organism=Escherichia coli, GI1790585, Length=93, Percent_Identity=48.3870967741936, Blast_Score=74, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17555568, Length=92, Percent_Identity=43.4782608695652, Blast_Score=74, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21358317, Length=90, Percent_Identity=46.6666666666667, Blast_Score=69, Evalue=5e-13,
Organism=Drosophila melanogaster, GI21356029, Length=91, Percent_Identity=46.1538461538462, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): CH10_EXISA (C4L1L1)

Other databases:

- EMBL:   CP001615
- RefSeq:   YP_002886488.1
- GeneID:   7870545
- GenomeReviews:   CP001615_GR
- KEGG:   eat:EAT1b_2120
- OMA:   QDRIIVK
- GO:   GO:0005737
- HAMAP:   MF_00580
- InterPro:   IPR020818
- InterPro:   IPR018369
- InterPro:   IPR011032
- Gene3D:   G3DSA:2.30.33.40
- PANTHER:   PTHR10772
- PRINTS:   PR00297
- SMART:   SM00883

Pfam domain/function: PF00166 Cpn10; SSF50129 GroES_like

EC number: NA

Molecular weight: Translated: 10318; Mature: 10318

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS00681 CHAPERONINS_CPN10

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKPLGDRVIIEVVEKEEKTIGGIVLPDTAKEKPQQGKVVAVGTGRVTDEGKRIDLDVKE
CCCCCCCEEEEEEECCCCCCCCCEECCCCCCCCCCCCCEEEEECCEECCCCCEEEEEECC
NDLVIYSKYAGTEVKHDGKEYLIVRESDILAIVG
CCEEEEEECCCCEECCCCCEEEEEECCCEEEEEC
>Mature Secondary Structure
MLKPLGDRVIIEVVEKEEKTIGGIVLPDTAKEKPQQGKVVAVGTGRVTDEGKRIDLDVKE
CCCCCCCEEEEEEECCCCCCCCCEECCCCCCCCCCCCCEEEEECCEECCCCCEEEEEECC
NDLVIYSKYAGTEVKHDGKEYLIVRESDILAIVG
CCEEEEEECCCCEECCCCCEEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA