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The map label for this gene is yhjP [H]

Identifier: 229917838

GI number: 229917838

Start: 2066062

End: 2067687

Strand: Direct

Name: yhjP [H]

Synonym: EAT1b_2116

Alternate gene names: 229917838

Gene position: 2066062-2067687 (Clockwise)

Preceding gene: 229917836

Following gene: 229917839

Centisome position: 68.87

GC content: 52.58

Gene sequence:

>1626_bases
GTGGATGCATATTTATTTCGATTGTGGAAAGAGTGTCGGGACGGCGCGTACACGATTTCCGATATGGCGGAAGCCATTCA
TTTAAGCCCGAAACAGACGAAGCGTCATTTGGCACGGTGGCAAGAAGAAGGGTGGCTCACGTATACGAGTGGACGCGGAC
GGGGAAATTTGACGCGTCTAGAATGGCTACGACACGTCGAGCGTGATTTGGCCAAACAGCTGCTTGACCGCATGGAGAAA
GAGTCGGTCGAGGCAGTGACGAATCAACTGGAGTGGGACTGGTCGCCTGCGCAGGCAGGTCGGTTCATGCGCCAGCTCGA
GAAGAAGTTCGGTTACGTCCAGACGTCGAGCGATGCGCTCATCATCCCGCGCCGTCGTCACTTTTTGACGACACATCCGC
TCGAGGCGGCTGACATCCACAGTGCCCACCTCGTCCAGAACGTATTCAATCGTCTGTTCATGATTGACGCGTCCGGGGAG
GTCACGGGGGAACTTGCGCATCACTATGAATGGCAGGGAAGTACACTCGTCTTGTTTCTTCGGAAAGGGGTCCGATTCCA
TGACGGGTCGCTCATGACGAGTAAAGATGTGACGAAGAGTCTGCGCATGCTCGTTCAATCGGATGCGTATCGCTATATGT
ACCGGCACGTCCGGCATATCGCATCGAATGGCACGTATCGCGTCGATGTCACGCTCGACCGGCGCCGAAATTCCTACATC
CCGAAACTGTCGATGATTCATACGAGTATCGCCAAAGGAAGTGTCGGGACGGGACCTTTTCAATTGGATCGCCATGACAA
GGAGAAGACGGTTCTTCTCGCCTTCGAGAATTATTTTGGGGTGCGGGCGCTCCTGGACCGGGTCGAGTTCATCAAAGTGC
CGGACGGATATGATCCGACGTATCGCATCTCATCAAGGGATTCCAAAGAAACCGGACACATCTCGACACCGTCCGGGTTC
GGGCTTGTCATCTTGAACAGTCACCCGAATAGTGTGTTCGCCAATGAAGAAGCGAGACATTACATGCATCGATTGATTGC
GGAGATTCGACCGGAAATCGGAACACGGAATGAACGGAGAACGCCGAACGACCGAGGGTTTCTCGGTTCGCTGAGCGAGA
CGTATCGCATTCCAAAAGGAACACCCGTCACGTTCGACCGACCGATTCGAATCAAACAGACGGACTTCACGAACGATACG
ACCGACTGGATTGCCGAGATGTTGACGCGTCACGGCATTGCTTATGAGTTCGTGCCCATCAGCTTTAAAGATTCGATTCA
TGACAAGACGTATTATGAATACGTCGATTTGGTCGTTCACGGAGAAGTGTTCGAGCGGAACATCACGCTCGGGTTTGAAC
AGTTCATGACGAACGAGTACTCGCCTCCGCATAAAGTGTTCCCTTATATAGAGGGGATGACCGAGCGAGTTGGGCAATAT
GATGACCTGCCGTTTGAGGACTGGTTGCCGCTACACCGGGAGATCGAACGCGAGTTGAAAGAAAAGTCGTATTTCATCCC
GCTCTATAACGAGGAGAGGACCATTCCGTTCCCGGTAGAGCTGAAGGACGTCTGTGTCGACTTGTTCGGTTATTTTGATT
TTGCGAAACTATGGATTCCATCATAA

Upstream 100 bases:

>100_bases
TGTCACCTTCCATTCTGTACCTGTATGATAAACAAGACAACGGATTTGAAAAATGGACGACATGGGGAAATGATGTCCAC
TTTTAAAGGGGGGATGTGAC

Downstream 100 bases:

>100_bases
GGAGAGATATTGTGCGTAAGAAGTTACTAATTGGGTTTATGATTTTTTTTGTAGGACTGTTTTTGTTTGCGCTATGGGAT
GGTGAATTCGTCGCCTTGTC

Product: extracellular solute-binding protein family 5

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MDAYLFRLWKECRDGAYTISDMAEAIHLSPKQTKRHLARWQEEGWLTYTSGRGRGNLTRLEWLRHVERDLAKQLLDRMEK
ESVEAVTNQLEWDWSPAQAGRFMRQLEKKFGYVQTSSDALIIPRRRHFLTTHPLEAADIHSAHLVQNVFNRLFMIDASGE
VTGELAHHYEWQGSTLVLFLRKGVRFHDGSLMTSKDVTKSLRMLVQSDAYRYMYRHVRHIASNGTYRVDVTLDRRRNSYI
PKLSMIHTSIAKGSVGTGPFQLDRHDKEKTVLLAFENYFGVRALLDRVEFIKVPDGYDPTYRISSRDSKETGHISTPSGF
GLVILNSHPNSVFANEEARHYMHRLIAEIRPEIGTRNERRTPNDRGFLGSLSETYRIPKGTPVTFDRPIRIKQTDFTNDT
TDWIAEMLTRHGIAYEFVPISFKDSIHDKTYYEYVDLVVHGEVFERNITLGFEQFMTNEYSPPHKVFPYIEGMTERVGQY
DDLPFEDWLPLHREIERELKEKSYFIPLYNEERTIPFPVELKDVCVDLFGYFDFAKLWIPS

Sequences:

>Translated_541_residues
MDAYLFRLWKECRDGAYTISDMAEAIHLSPKQTKRHLARWQEEGWLTYTSGRGRGNLTRLEWLRHVERDLAKQLLDRMEK
ESVEAVTNQLEWDWSPAQAGRFMRQLEKKFGYVQTSSDALIIPRRRHFLTTHPLEAADIHSAHLVQNVFNRLFMIDASGE
VTGELAHHYEWQGSTLVLFLRKGVRFHDGSLMTSKDVTKSLRMLVQSDAYRYMYRHVRHIASNGTYRVDVTLDRRRNSYI
PKLSMIHTSIAKGSVGTGPFQLDRHDKEKTVLLAFENYFGVRALLDRVEFIKVPDGYDPTYRISSRDSKETGHISTPSGF
GLVILNSHPNSVFANEEARHYMHRLIAEIRPEIGTRNERRTPNDRGFLGSLSETYRIPKGTPVTFDRPIRIKQTDFTNDT
TDWIAEMLTRHGIAYEFVPISFKDSIHDKTYYEYVDLVVHGEVFERNITLGFEQFMTNEYSPPHKVFPYIEGMTERVGQY
DDLPFEDWLPLHREIERELKEKSYFIPLYNEERTIPFPVELKDVCVDLFGYFDFAKLWIPS
>Mature_541_residues
MDAYLFRLWKECRDGAYTISDMAEAIHLSPKQTKRHLARWQEEGWLTYTSGRGRGNLTRLEWLRHVERDLAKQLLDRMEK
ESVEAVTNQLEWDWSPAQAGRFMRQLEKKFGYVQTSSDALIIPRRRHFLTTHPLEAADIHSAHLVQNVFNRLFMIDASGE
VTGELAHHYEWQGSTLVLFLRKGVRFHDGSLMTSKDVTKSLRMLVQSDAYRYMYRHVRHIASNGTYRVDVTLDRRRNSYI
PKLSMIHTSIAKGSVGTGPFQLDRHDKEKTVLLAFENYFGVRALLDRVEFIKVPDGYDPTYRISSRDSKETGHISTPSGF
GLVILNSHPNSVFANEEARHYMHRLIAEIRPEIGTRNERRTPNDRGFLGSLSETYRIPKGTPVTFDRPIRIKQTDFTNDT
TDWIAEMLTRHGIAYEFVPISFKDSIHDKTYYEYVDLVVHGEVFERNITLGFEQFMTNEYSPPHKVFPYIEGMTERVGQY
DDLPFEDWLPLHREIERELKEKSYFIPLYNEERTIPFPVELKDVCVDLFGYFDFAKLWIPS

Specific function: Unknown

COG id: COG4533

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786256, Length=315, Percent_Identity=25.7142857142857, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1786650, Length=571, Percent_Identity=21.5411558669002, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 63352; Mature: 63352

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAYLFRLWKECRDGAYTISDMAEAIHLSPKQTKRHLARWQEEGWLTYTSGRGRGNLTRL
CCHHHHHHHHHHCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHH
EWLRHVERDLAKQLLDRMEKESVEAVTNQLEWDWSPAQAGRFMRQLEKKFGYVQTSSDAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEECCCEE
IIPRRRHFLTTHPLEAADIHSAHLVQNVFNRLFMIDASGEVTGELAHHYEWQGSTLVLFL
EECCCCCEEECCCCCHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHEECCCCEEEEEE
RKGVRFHDGSLMTSKDVTKSLRMLVQSDAYRYMYRHVRHIASNGTYRVDVTLDRRRNSYI
CCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC
PKLSMIHTSIAKGSVGTGPFQLDRHDKEKTVLLAFENYFGVRALLDRVEFIKVPDGYDPT
CHHHHHHHHHHCCCCCCCCCEECCCCCCCEEEEEEHHHHHHHHHHHHHHEEECCCCCCCC
YRISSRDSKETGHISTPSGFGLVILNSHPNSVFANEEARHYMHRLIAEIRPEIGTRNERR
EEECCCCCCCCCCCCCCCCCEEEEECCCCCCEECCHHHHHHHHHHHHHHCCCCCCCCCCC
TPNDRGFLGSLSETYRIPKGTPVTFDRPIRIKQTDFTNDTTDWIAEMLTRHGIAYEFVPI
CCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEE
SFKDSIHDKTYYEYVDLVVHGEVFERNITLGFEQFMTNEYSPPHKVFPYIEGMTERVGQY
CCCCCCCCHHHHHHHHHHEECHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCC
DDLPFEDWLPLHREIERELKEKSYFIPLYNEERTIPFPVELKDVCVDLFGYFDFAKLWIP
CCCCCHHCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
S
C
>Mature Secondary Structure
MDAYLFRLWKECRDGAYTISDMAEAIHLSPKQTKRHLARWQEEGWLTYTSGRGRGNLTRL
CCHHHHHHHHHHCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHH
EWLRHVERDLAKQLLDRMEKESVEAVTNQLEWDWSPAQAGRFMRQLEKKFGYVQTSSDAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEECCCEE
IIPRRRHFLTTHPLEAADIHSAHLVQNVFNRLFMIDASGEVTGELAHHYEWQGSTLVLFL
EECCCCCEEECCCCCHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHEECCCCEEEEEE
RKGVRFHDGSLMTSKDVTKSLRMLVQSDAYRYMYRHVRHIASNGTYRVDVTLDRRRNSYI
CCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC
PKLSMIHTSIAKGSVGTGPFQLDRHDKEKTVLLAFENYFGVRALLDRVEFIKVPDGYDPT
CHHHHHHHHHHCCCCCCCCCEECCCCCCCEEEEEEHHHHHHHHHHHHHHEEECCCCCCCC
YRISSRDSKETGHISTPSGFGLVILNSHPNSVFANEEARHYMHRLIAEIRPEIGTRNERR
EEECCCCCCCCCCCCCCCCCEEEEECCCCCCEECCHHHHHHHHHHHHHHCCCCCCCCCCC
TPNDRGFLGSLSETYRIPKGTPVTFDRPIRIKQTDFTNDTTDWIAEMLTRHGIAYEFVPI
CCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEE
SFKDSIHDKTYYEYVDLVVHGEVFERNITLGFEQFMTNEYSPPHKVFPYIEGMTERVGQY
CCCCCCCCHHHHHHHHHHEECHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCC
DDLPFEDWLPLHREIERELKEKSYFIPLYNEERTIPFPVELKDVCVDLFGYFDFAKLWIP
CCCCCHHCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]