| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917783
Identifier: 229917783
GI number: 229917783
Start: 2012879
End: 2013154
Strand: Direct
Name: 229917783
Synonym: EAT1b_2061
Alternate gene names: NA
Gene position: 2012879-2013154 (Clockwise)
Preceding gene: 229917780
Following gene: 229917784
Centisome position: 67.1
GC content: 47.46
Gene sequence:
>276_bases ATGGTATTATCGCAAAGTGAATTGACAGATGAACTGTCACGGTTGAACGGTTGGGAAGAAGTGAACGGGGAGATTCAAAA GACGTATCGGCTAGAAACGTTTCCGGAGGCCATCCAGTTCGTGCATCTTGTAGCAGATTTGGCTGAATCGCTCGATCATC ATCCGAACATCTTGATTGAATATCGGAACGTGACATTGACCGTCTCGACCCATGACGAAGGGGGCATCACAGAGAAAGAC ATCACACTCGCGAAAGGGTGTGAGGAACTTGTCTAA
Upstream 100 bases:
>100_bases ACCTCATTCTAATTCATTATACATCATGCGCGGAAGATTATTTTTCTCCGGTTTGGGTAGATTAAGACAGTAGACTGTAT AGGGAAAGGGGATTGTGACG
Downstream 100 bases:
>100_bases GCTCTATATGACTTTTGCGTCAGGCAGCGTGGCGGAGCGTCTTCGAAAGGAACCGGGCGTCATCGCGGCGAATGGACACG AAACGATTCTGCTCGCGGAA
Product: transcriptional coactivator/pterin dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD [H]
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MVLSQSELTDELSRLNGWEEVNGEIQKTYRLETFPEAIQFVHLVADLAESLDHHPNILIEYRNVTLTVSTHDEGGITEKD ITLAKGCEELV
Sequences:
>Translated_91_residues MVLSQSELTDELSRLNGWEEVNGEIQKTYRLETFPEAIQFVHLVADLAESLDHHPNILIEYRNVTLTVSTHDEGGITEKD ITLAKGCEELV >Mature_91_residues MVLSQSELTDELSRLNGWEEVNGEIQKTYRLETFPEAIQFVHLVADLAESLDHHPNILIEYRNVTLTVSTHDEGGITEKD ITLAKGCEELV
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family [H]
Homologues:
Organism=Caenorhabditis elegans, GI115533705, Length=94, Percent_Identity=41.4893617021277, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001533 [H]
Pfam domain/function: PF01329 Pterin_4a [H]
EC number: =4.2.1.96 [H]
Molecular weight: Translated: 10295; Mature: 10295
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLSQSELTDELSRLNGWEEVNGEIQKTYRLETFPEAIQFVHLVADLAESLDHHPNILIE CCCCHHHHHHHHHHCCCHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE YRNVTLTVSTHDEGGITEKDITLAKGCEELV EEEEEEEEEECCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MVLSQSELTDELSRLNGWEEVNGEIQKTYRLETFPEAIQFVHLVADLAESLDHHPNILIE CCCCHHHHHHHHHHCCCHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE YRNVTLTVSTHDEGGITEKDITLAKGCEELV EEEEEEEEEECCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA