Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is 229917745

Identifier: 229917745

GI number: 229917745

Start: 1976214

End: 1976708

Strand: Direct

Name: 229917745

Synonym: EAT1b_2023

Alternate gene names: NA

Gene position: 1976214-1976708 (Clockwise)

Preceding gene: 229917743

Following gene: 229917746

Centisome position: 65.88

GC content: 50.1

Gene sequence:

>495_bases
ATGATTGGATTACTCATTGGGATTATCGGTGCCATATGTTTGTGGTGGTTCGAGGCACCGCTTTGGAGCAGCGTCCTGCT
TCTCTTGCTTGGAATTGCGTGGTTTATATGGAAAGTAAGGCTGTCGACCATCGACCGCATTGATCGGATGGATGGTCGGG
AGTTTGAACTATTTTTAGAGGAAGTGTTCACCGCGCTTGGATATACGGTCACGGTGACTCCGGCATCGCGTGACTTTGGA
GCAGACTTGTTACTGGAGACACCGGATGGATGGTCGATTGCCGTTCAAGCAAAGCGTTATGAAAAGACGGTCGGGCTCGA
AGCGGTTCAACAAATTGCAGCGGCCGTGCCCTATTATCAAGCACACGAAGGCTGGGTCGTGACGAACTCGAATTTCACGG
ACAGCGCATACGAATTGGCGGCGCCAAATCAAGTTCGTCTGATTGCAAGAATGGAGCTTGAAGAACTCTTAAAAGAGGCG
GGATATAAGCGATGA

Upstream 100 bases:

>100_bases
CAGACGAGCACATCTTCTATATCATTCGACAGATCCCCCTTTCATTTCCTGCCCTCGAAACGGTAAAGTGAGGGAGAGGA
CTTGGAAAGGAAAGATGGAG

Downstream 100 bases:

>100_bases
GAATAGGCTTGTTCACAAGTTCGACAGAATCCAAATGATGTCGAAAAAAAAGGGTTGTCTTTTTCTTTAAACGATGCAAT
AATCATCTTCGTCATATGAA

Product: restriction endonuclease

Products: NA

Alternate protein names: Endonuclease; Type II Restriction Endonuclease Family Protein; Restriction Endonuclease Family Protein; Restriction Endonuclease-Like Protein; Prophage; 5-Methylcytosine-Specific Restriction MRR; Mrr-Like Endonuclease

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MIGLLIGIIGAICLWWFEAPLWSSVLLLLLGIAWFIWKVRLSTIDRIDRMDGREFELFLEEVFTALGYTVTVTPASRDFG
ADLLLETPDGWSIAVQAKRYEKTVGLEAVQQIAAAVPYYQAHEGWVVTNSNFTDSAYELAAPNQVRLIARMELEELLKEA
GYKR

Sequences:

>Translated_164_residues
MIGLLIGIIGAICLWWFEAPLWSSVLLLLLGIAWFIWKVRLSTIDRIDRMDGREFELFLEEVFTALGYTVTVTPASRDFG
ADLLLETPDGWSIAVQAKRYEKTVGLEAVQQIAAAVPYYQAHEGWVVTNSNFTDSAYELAAPNQVRLIARMELEELLKEA
GYKR
>Mature_164_residues
MIGLLIGIIGAICLWWFEAPLWSSVLLLLLGIAWFIWKVRLSTIDRIDRMDGREFELFLEEVFTALGYTVTVTPASRDFG
ADLLLETPDGWSIAVQAKRYEKTVGLEAVQQIAAAVPYYQAHEGWVVTNSNFTDSAYELAAPNQVRLIARMELEELLKEA
GYKR

Specific function: Unknown

COG id: COG1787

COG function: function code V; Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18557; Mature: 18557

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGLLIGIIGAICLWWFEAPLWSSVLLLLLGIAWFIWKVRLSTIDRIDRMDGREFELFLE
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
EVFTALGYTVTVTPASRDFGADLLLETPDGWSIAVQAKRYEKTVGLEAVQQIAAAVPYYQ
HHHHHHCCEEEEECCCCCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCC
AHEGWVVTNSNFTDSAYELAAPNQVRLIARMELEELLKEAGYKR
CCCCEEEECCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIGLLIGIIGAICLWWFEAPLWSSVLLLLLGIAWFIWKVRLSTIDRIDRMDGREFELFLE
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
EVFTALGYTVTVTPASRDFGADLLLETPDGWSIAVQAKRYEKTVGLEAVQQIAAAVPYYQ
HHHHHHCCEEEEECCCCCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCC
AHEGWVVTNSNFTDSAYELAAPNQVRLIARMELEELLKEAGYKR
CCCCEEEECCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA