| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is ydzA [H]
Identifier: 229917670
GI number: 229917670
Start: 1907375
End: 1907671
Strand: Direct
Name: ydzA [H]
Synonym: EAT1b_1947
Alternate gene names: 229917670
Gene position: 1907375-1907671 (Clockwise)
Preceding gene: 229917669
Following gene: 229917672
Centisome position: 63.58
GC content: 47.47
Gene sequence:
>297_bases ATGACTACGACTCATTTTAAATGGCTTGGCTACACAGAGGGTGTATCCTTCTTGTTGTTACTGTTCATCGCGATGCCGTT GAAATATATGGCCGGTATTCCACTCGCGGTCAGTATCGTTGGTGCAGCACATGGTTTCTTATTTGTGGCCTACGTGCTCG CAGCGATCTACATGGCATGGCGCTTGCGCTGGGGATTCAAAGTTTTGACGCTTGCTGTCATGGCATCTGTCATCCCATTC GGACCATTTTTATTAGAAAAACGGGTACTCCCGTCAACAGAGAAGACATCGAACTGA
Upstream 100 bases:
>100_bases ATCGTCAAATAGCCTCGTAACTTTTATGCGTTCTCTTGTGACAAACCTCTCACGTTTCGGCTACGATAGATATAGCCTAC AGAAATAAAGGAGAACGCAT
Downstream 100 bases:
>100_bases TTCGTTCGATGTCTTTTTTCGTTACGATACACGTTCCATTGACTGGGCTGCATCTCGTTCTGCTTGGATGTCATGCCGGA TTCGGTACGTTAGGACGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MTTTHFKWLGYTEGVSFLLLLFIAMPLKYMAGIPLAVSIVGAAHGFLFVAYVLAAIYMAWRLRWGFKVLTLAVMASVIPF GPFLLEKRVLPSTEKTSN
Sequences:
>Translated_98_residues MTTTHFKWLGYTEGVSFLLLLFIAMPLKYMAGIPLAVSIVGAAHGFLFVAYVLAAIYMAWRLRWGFKVLTLAVMASVIPF GPFLLEKRVLPSTEKTSN >Mature_97_residues TTTHFKWLGYTEGVSFLLLLFIAMPLKYMAGIPLAVSIVGAAHGFLFVAYVLAAIYMAWRLRWGFKVLTLAVMASVIPFG PFLLEKRVLPSTEKTSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10913; Mature: 10782
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTHFKWLGYTEGVSFLLLLFIAMPLKYMAGIPLAVSIVGAAHGFLFVAYVLAAIYMAW CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RLRWGFKVLTLAVMASVIPFGPFLLEKRVLPSTEKTSN HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCC >Mature Secondary Structure TTTHFKWLGYTEGVSFLLLLFIAMPLKYMAGIPLAVSIVGAAHGFLFVAYVLAAIYMAW CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RLRWGFKVLTLAVMASVIPFGPFLLEKRVLPSTEKTSN HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]