| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917629
Identifier: 229917629
GI number: 229917629
Start: 1869864
End: 1870370
Strand: Direct
Name: 229917629
Synonym: EAT1b_1905
Alternate gene names: NA
Gene position: 1869864-1870370 (Clockwise)
Preceding gene: 229917628
Following gene: 229917630
Centisome position: 62.33
GC content: 51.68
Gene sequence:
>507_bases ATGTCGAATGAATCAAAAGACCGGGAACGCTTATCCGAACTCGTCGATAACTTGAGTCGGGCCGATGACGTGAAACTGAA TCGACGGGCGTTCATCAAATCAACGTTCGGCGCAGGTATCGCACTCGGTCTCGCGACTATCCCGTTCAATATCGCGGCCT TCGTTCGAAGCGAGCCGAGAACCGACCGTCAGTTCATCACGACGGTCGAGGCGCTAGAGCGCGGGAAATCACTCGAATTT GAATATCCGGGTACGGAACCATCGTTGCTCGTTCATTTAAAGAATGGTGAATTCGTCGCCTATAACAACAAATGCACTCA TCTGCAGTGCCCAGTGTTTTATGTGGAGGAAGAAGATGTTCTTCTTTGTCCGTGCCATCGTGGTTACTTCGGTGTCGACG GCCAACCACAGGCCGGTCCGCCGCAGCGGGAACTCCCTAAAATCTTGCTTGAAATCGAGAACGGGAAGATTTTTGCGGTC GGAAGAGAGATTCATCATGGGGCGTAA
Upstream 100 bases:
>100_bases ACATGATCGAAGGGAAAAAGCCTTCGCAAGACGATAAATGGAATTACGTCCCTGAATTCTTTGGCGTCTATTCCGATTGA GATGGAAAGGAAGATGACTT
Downstream 100 bases:
>100_bases CGGTTGGAGTTTAATCGGATTGGTCATATTGCTCGCGACGAACATGATACTCTTGCAATATACAATTGAGAGCTACATGG TGTATAATCACGCCTCGATG
Product: Rieske (2Fe-2S) domain protein
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; Rieske Iron-Sulfur Protein; Rieske Domain Protein; Cytochrome B/B6 Complex Iron-Sulfur Subunit; Rieske Iron-Sulfur Domain
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MSNESKDRERLSELVDNLSRADDVKLNRRAFIKSTFGAGIALGLATIPFNIAAFVRSEPRTDRQFITTVEALERGKSLEF EYPGTEPSLLVHLKNGEFVAYNNKCTHLQCPVFYVEEEDVLLCPCHRGYFGVDGQPQAGPPQRELPKILLEIENGKIFAV GREIHHGA
Sequences:
>Translated_168_residues MSNESKDRERLSELVDNLSRADDVKLNRRAFIKSTFGAGIALGLATIPFNIAAFVRSEPRTDRQFITTVEALERGKSLEF EYPGTEPSLLVHLKNGEFVAYNNKCTHLQCPVFYVEEEDVLLCPCHRGYFGVDGQPQAGPPQRELPKILLEIENGKIFAV GREIHHGA >Mature_167_residues SNESKDRERLSELVDNLSRADDVKLNRRAFIKSTFGAGIALGLATIPFNIAAFVRSEPRTDRQFITTVEALERGKSLEFE YPGTEPSLLVHLKNGEFVAYNNKCTHLQCPVFYVEEEDVLLCPCHRGYFGVDGQPQAGPPQRELPKILLEIENGKIFAVG REIHHGA
Specific function: Unknown
COG id: COG0723
COG function: function code C; Rieske Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18829; Mature: 18697
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: PS00200 RIESKE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNESKDRERLSELVDNLSRADDVKLNRRAFIKSTFGAGIALGLATIPFNIAAFVRSEPR CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHEEHHHHCCHHEEEEECCCCC TDRQFITTVEALERGKSLEFEYPGTEPSLLVHLKNGEFVAYNNKCTHLQCPVFYVEEEDV CCHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCEEEECCCCCEEECCEEEECCCCE LLCPCHRGYFGVDGQPQAGPPQRELPKILLEIENGKIFAVGREIHHGA EEEECCCCEECCCCCCCCCCCHHHHCEEEEEECCCEEEEECCCCCCCC >Mature Secondary Structure SNESKDRERLSELVDNLSRADDVKLNRRAFIKSTFGAGIALGLATIPFNIAAFVRSEPR CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHEEHHHHCCHHEEEEECCCCC TDRQFITTVEALERGKSLEFEYPGTEPSLLVHLKNGEFVAYNNKCTHLQCPVFYVEEEDV CCHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCEEEECCCCCEEECCEEEECCCCE LLCPCHRGYFGVDGQPQAGPPQRELPKILLEIENGKIFAVGREIHHGA EEEECCCCEECCCCCCCCCCCHHHHCEEEEEECCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA