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The map label for this gene is glcB [H]

Identifier: 229917619

GI number: 229917619

Start: 1859008

End: 1861191

Strand: Direct

Name: glcB [H]

Synonym: EAT1b_1894

Alternate gene names: 229917619

Gene position: 1859008-1861191 (Clockwise)

Preceding gene: 229917616

Following gene: 229917620

Centisome position: 61.97

GC content: 50.78

Gene sequence:

>2184_bases
TTGGAACACTATGAACGACTAGATACGTATCATATTCATGAGAAACTGCTCGAATTTGTGAATAAAAACGTACTTGAACC
CCATGAAATTAACGCTTTTTGGGAAGGCGTCGAATCGCTTCTAGAGCGTTTCATTCCAGTGAATCAGACACTTCTAGAGC
AGCGCACGACATATGAGCGATTGTTACAGGAGTGGTACAGTCGCCAAGAAGAAGTCGATCCAATCGAATACGAGACATTT
TTAACGTCGATCGGCTATATCGAACCGGTCGTCGAAGATTTTAATATCGACGTGTCGAATGTCGATCGCGAAATCGCGCA
TCAAGCTGGACCGCAACTCGTCGTACCGTTAGACAATGCCAGATATGCACTTAACGCCGCCAACGCCAGATGGGGAAGTC
TCTACGACGCCCTTTATGGGACGGACATGATTGACGAGACAGACGGTATGGAAAAGGGGCGAGCATATAATCCCGTTCGC
GGTAATGAGGTTATTCGGTTGGCGAAACTGTTTCTGGATGACACGTTCCCGCTACCATCAGGGTCGCACAAGGAAGTGAC
ACGATACGTCGTTCGTGACGATGTCGCCTATGCGGTAATCGGGGACGTCGAGCATTCGTTCGCAGATGATTCCTTCGTCG
GTTACACCGGGGAACCGAACGAGTTGAAGACGTTGATGCTCAGACACCATGCCTTACACGTTGCACTGCAATTTGACCGC
GAGCATCCGGTCGGAAAGGTCGATCCTGCTGGACTGATGGACATCGAGCTCGAATCAGCCCTATCCGCAATCGTGGATTG
TGAGGACTCGGTCGCAGCCGTTTGTGCGGAAGACAAAGTTCATCTGTATCGTAATTGGCTCGGTCTGATGGATGGGACGC
TTGAAGCCTCGTTCCAAAAGAATGGGAAGCGACTCTCTCGGCGTTTAAACGAAGACAAGCGTTTGATTGGAAAAGGTGGA
GCGGAAGTCGTCCTCCCAGGACGCGCGCTCTTATTCATTCGGAACGTCGGACACTTGATGACGACGGACTTGATCCTTGA
TGCAGCAGGTCGCGAGGTGCCAGAAGGAATCGTGGATGCCATCTTCACTTCATTGATCGCAAGTCGCCATCTCCATCGTC
GTCTCAACTCTCGAGAAGGATCGATCTATATCGTCAAACCGAAAATGCACGGCTCTGAAGAAGTTGCATTCACCAATGAC
CTGTTTGACGCCGTAGAAGATTTACTGGATCTTCCGCGCCATACGTTAAAAGTCGGCGTGATGGATGAAGAGAGACGAAC
GTCGCTAAACTTGAAAAATTGTATCGAGCAAGTAAAAGAGCGAGTCGTCTTCATCAACACGGGCTTTCTCGACCGTACGG
GAGACGAGATTCATTCCTCGATGACACTCGGACCGATGCGTCGGAAGGGAGAAATGAAGACGTCACCTTGGCTCGCTGCA
TATGAACGGTTGAATGTATCAACCGGTCTCGAGAGTGGGTTCCATCATCAAGCACAAATCGGAAAAGGGATGTGGGCGAT
GCCCGACCGGATGCAGGACATGATGCGTGAAAAAATGGCACACATACGCTCCGGGGCAACGACGGCATGGGTGCCTTCAC
CGACCGCGGCGACGCTCCATGCGATGCACTATCATCAACTTGATGCTTTTGATGTACAGCGAGAATTGATGCAACAGCCT
GTTTTGAAACACGAACGACAACAGCTCCTTGATATCCCGCTCGCGACGCGCATCTATTCGCAAGAAGAGATCAAGGAAGA
GCTCGAGAACAACTTGCAAGGATTGCTCGGGTACGTCGTTCGTTGGGTCGAACAAGGTGTCGGTTGTTCGAAAGTGCCGG
ATATTCACCATATCGGACTGATGGAAGACCGGGCGACACTCCGGATTTCGAGCCAACACGTGGCCAACTGGTTACATCAC
GGCATCTGTTCAGCGGAACAAGTCGAGGTCACCCTTTATCGGATGGCACGAGTCGTCGATGAGCAAAACGAGTCAGACCC
GAATTATCGACCGATGACGCCGAACGTCAATCAGTCGATCGCCTATCAAGCCGCCCACGAACTCGTGTTTCATGGGTTGA
AACAGCCAAACGGGTACACGGAGCCAATCTTGCATCGTCGCCGCCGTGAATTTATGAAACGTCAAACTGTGGAGTTAAAC
CTTAAAGGAGGAACCTCATCATGA

Upstream 100 bases:

>100_bases
CAAATAAAAAGTTTTAAAAAATAGGTTGTCAAACTGTTATATAATAGTCTATATTATAACAAACTGATATATAACAATGA
TTAAAGGAGGATGTGAACGC

Downstream 100 bases:

>100_bases
CAACGAAAAAAATGGAAAGCGAACAGTTGATTGAACGTTGGGTCGTCCGCCGCATCGTATCTGGAGAATCGACAGCATCT
TTGGCGAATACGGCATTCGT

Product: malate synthase G

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 727; Mature: 727

Protein sequence:

>727_residues
MEHYERLDTYHIHEKLLEFVNKNVLEPHEINAFWEGVESLLERFIPVNQTLLEQRTTYERLLQEWYSRQEEVDPIEYETF
LTSIGYIEPVVEDFNIDVSNVDREIAHQAGPQLVVPLDNARYALNAANARWGSLYDALYGTDMIDETDGMEKGRAYNPVR
GNEVIRLAKLFLDDTFPLPSGSHKEVTRYVVRDDVAYAVIGDVEHSFADDSFVGYTGEPNELKTLMLRHHALHVALQFDR
EHPVGKVDPAGLMDIELESALSAIVDCEDSVAAVCAEDKVHLYRNWLGLMDGTLEASFQKNGKRLSRRLNEDKRLIGKGG
AEVVLPGRALLFIRNVGHLMTTDLILDAAGREVPEGIVDAIFTSLIASRHLHRRLNSREGSIYIVKPKMHGSEEVAFTND
LFDAVEDLLDLPRHTLKVGVMDEERRTSLNLKNCIEQVKERVVFINTGFLDRTGDEIHSSMTLGPMRRKGEMKTSPWLAA
YERLNVSTGLESGFHHQAQIGKGMWAMPDRMQDMMREKMAHIRSGATTAWVPSPTAATLHAMHYHQLDAFDVQRELMQQP
VLKHERQQLLDIPLATRIYSQEEIKEELENNLQGLLGYVVRWVEQGVGCSKVPDIHHIGLMEDRATLRISSQHVANWLHH
GICSAEQVEVTLYRMARVVDEQNESDPNYRPMTPNVNQSIAYQAAHELVFHGLKQPNGYTEPILHRRRREFMKRQTVELN
LKGGTSS

Sequences:

>Translated_727_residues
MEHYERLDTYHIHEKLLEFVNKNVLEPHEINAFWEGVESLLERFIPVNQTLLEQRTTYERLLQEWYSRQEEVDPIEYETF
LTSIGYIEPVVEDFNIDVSNVDREIAHQAGPQLVVPLDNARYALNAANARWGSLYDALYGTDMIDETDGMEKGRAYNPVR
GNEVIRLAKLFLDDTFPLPSGSHKEVTRYVVRDDVAYAVIGDVEHSFADDSFVGYTGEPNELKTLMLRHHALHVALQFDR
EHPVGKVDPAGLMDIELESALSAIVDCEDSVAAVCAEDKVHLYRNWLGLMDGTLEASFQKNGKRLSRRLNEDKRLIGKGG
AEVVLPGRALLFIRNVGHLMTTDLILDAAGREVPEGIVDAIFTSLIASRHLHRRLNSREGSIYIVKPKMHGSEEVAFTND
LFDAVEDLLDLPRHTLKVGVMDEERRTSLNLKNCIEQVKERVVFINTGFLDRTGDEIHSSMTLGPMRRKGEMKTSPWLAA
YERLNVSTGLESGFHHQAQIGKGMWAMPDRMQDMMREKMAHIRSGATTAWVPSPTAATLHAMHYHQLDAFDVQRELMQQP
VLKHERQQLLDIPLATRIYSQEEIKEELENNLQGLLGYVVRWVEQGVGCSKVPDIHHIGLMEDRATLRISSQHVANWLHH
GICSAEQVEVTLYRMARVVDEQNESDPNYRPMTPNVNQSIAYQAAHELVFHGLKQPNGYTEPILHRRRREFMKRQTVELN
LKGGTSS
>Mature_727_residues
MEHYERLDTYHIHEKLLEFVNKNVLEPHEINAFWEGVESLLERFIPVNQTLLEQRTTYERLLQEWYSRQEEVDPIEYETF
LTSIGYIEPVVEDFNIDVSNVDREIAHQAGPQLVVPLDNARYALNAANARWGSLYDALYGTDMIDETDGMEKGRAYNPVR
GNEVIRLAKLFLDDTFPLPSGSHKEVTRYVVRDDVAYAVIGDVEHSFADDSFVGYTGEPNELKTLMLRHHALHVALQFDR
EHPVGKVDPAGLMDIELESALSAIVDCEDSVAAVCAEDKVHLYRNWLGLMDGTLEASFQKNGKRLSRRLNEDKRLIGKGG
AEVVLPGRALLFIRNVGHLMTTDLILDAAGREVPEGIVDAIFTSLIASRHLHRRLNSREGSIYIVKPKMHGSEEVAFTND
LFDAVEDLLDLPRHTLKVGVMDEERRTSLNLKNCIEQVKERVVFINTGFLDRTGDEIHSSMTLGPMRRKGEMKTSPWLAA
YERLNVSTGLESGFHHQAQIGKGMWAMPDRMQDMMREKMAHIRSGATTAWVPSPTAATLHAMHYHQLDAFDVQRELMQQP
VLKHERQQLLDIPLATRIYSQEEIKEELENNLQGLLGYVVRWVEQGVGCSKVPDIHHIGLMEDRATLRISSQHVANWLHH
GICSAEQVEVTLYRMARVVDEQNESDPNYRPMTPNVNQSIAYQAAHELVFHGLKQPNGYTEPILHRRRREFMKRQTVELN
LKGGTSS

Specific function: Accounts For Almost The Entire Malate-Synthesizing Activity In Cells Metabolizing Glyoxylate. [C]

COG id: COG2225

COG function: function code C; Malate synthase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the malate synthase family. GlcB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789348, Length=711, Percent_Identity=52.1800281293952, Blast_Score=746, Evalue=0.0,
Organism=Escherichia coli, GI1790444, Length=316, Percent_Identity=24.6835443037975, Blast_Score=73, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6322222, Length=329, Percent_Identity=25.2279635258359, Blast_Score=78, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6324212, Length=321, Percent_Identity=24.2990654205607, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011076
- InterPro:   IPR001465
- InterPro:   IPR006253 [H]

Pfam domain/function: PF01274 Malate_synthase [H]

EC number: =2.3.3.9 [H]

Molecular weight: Translated: 82901; Mature: 82901

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHYERLDTYHIHEKLLEFVNKNVLEPHEINAFWEGVESLLERFIPVNQTLLEQRTTYER
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LLQEWYSRQEEVDPIEYETFLTSIGYIEPVVEDFNIDVSNVDREIAHQAGPQLVVPLDNA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCC
RYALNAANARWGSLYDALYGTDMIDETDGMEKGRAYNPVRGNEVIRLAKLFLDDTFPLPS
CEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
GSHKEVTRYVVRDDVAYAVIGDVEHSFADDSFVGYTGEPNELKTLMLRHHALHVALQFDR
CCHHHHHHHHHHHCCCEEEECCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECC
EHPVGKVDPAGLMDIELESALSAIVDCEDSVAAVCAEDKVHLYRNWLGLMDGTLEASFQK
CCCCCCCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
NGKRLSRRLNEDKRLIGKGGAEVVLPGRALLFIRNVGHLMTTDLILDAAGREVPEGIVDA
HHHHHHHHHCHHHHHHCCCCCEEEECCHHEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
IFTSLIASRHLHRRLNSREGSIYIVKPKMHGSEEVAFTNDLFDAVEDLLDLPRHTLKVGV
HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHCCHHHEEECC
MDEERRTSLNLKNCIEQVKERVVFINTGFLDRTGDEIHSSMTLGPMRRKGEMKTSPWLAA
CCHHHHHCCCHHHHHHHHHHCEEEEECCCCCCCCHHHHHCCCCCHHHHCCCCCCCCHHHH
YERLNVSTGLESGFHHQAQIGKGMWAMPDRMQDMMREKMAHIRSGATTAWVPSPTAATLH
HHHHCHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHH
AMHYHQLDAFDVQRELMQQPVLKHERQQLLDIPLATRIYSQEEIKEELENNLQGLLGYVV
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RWVEQGVGCSKVPDIHHIGLMEDRATLRISSQHVANWLHHGICSAEQVEVTLYRMARVVD
HHHHHCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
EQNESDPNYRPMTPNVNQSIAYQAAHELVFHGLKQPNGYTEPILHRRRREFMKRQTVELN
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEE
LKGGTSS
ECCCCCC
>Mature Secondary Structure
MEHYERLDTYHIHEKLLEFVNKNVLEPHEINAFWEGVESLLERFIPVNQTLLEQRTTYER
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LLQEWYSRQEEVDPIEYETFLTSIGYIEPVVEDFNIDVSNVDREIAHQAGPQLVVPLDNA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCC
RYALNAANARWGSLYDALYGTDMIDETDGMEKGRAYNPVRGNEVIRLAKLFLDDTFPLPS
CEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
GSHKEVTRYVVRDDVAYAVIGDVEHSFADDSFVGYTGEPNELKTLMLRHHALHVALQFDR
CCHHHHHHHHHHHCCCEEEECCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECC
EHPVGKVDPAGLMDIELESALSAIVDCEDSVAAVCAEDKVHLYRNWLGLMDGTLEASFQK
CCCCCCCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
NGKRLSRRLNEDKRLIGKGGAEVVLPGRALLFIRNVGHLMTTDLILDAAGREVPEGIVDA
HHHHHHHHHCHHHHHHCCCCCEEEECCHHEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
IFTSLIASRHLHRRLNSREGSIYIVKPKMHGSEEVAFTNDLFDAVEDLLDLPRHTLKVGV
HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHCCHHHEEECC
MDEERRTSLNLKNCIEQVKERVVFINTGFLDRTGDEIHSSMTLGPMRRKGEMKTSPWLAA
CCHHHHHCCCHHHHHHHHHHCEEEEECCCCCCCCHHHHHCCCCCHHHHCCCCCCCCHHHH
YERLNVSTGLESGFHHQAQIGKGMWAMPDRMQDMMREKMAHIRSGATTAWVPSPTAATLH
HHHHCHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHH
AMHYHQLDAFDVQRELMQQPVLKHERQQLLDIPLATRIYSQEEIKEELENNLQGLLGYVV
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RWVEQGVGCSKVPDIHHIGLMEDRATLRISSQHVANWLHHGICSAEQVEVTLYRMARVVD
HHHHHCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
EQNESDPNYRPMTPNVNQSIAYQAAHELVFHGLKQPNGYTEPILHRRRREFMKRQTVELN
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEE
LKGGTSS
ECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA