| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is isdG [H]
Identifier: 229917578
GI number: 229917578
Start: 1823710
End: 1824048
Strand: Reverse
Name: isdG [H]
Synonym: EAT1b_1853
Alternate gene names: 229917578
Gene position: 1824048-1823710 (Counterclockwise)
Preceding gene: 229917579
Following gene: 229917576
Centisome position: 60.8
GC content: 49.56
Gene sequence:
>339_bases ATGTGGATTGTCATGAACAAACTAGACGTTGAAAAAGGGAAAGCCGACGCGGTCAAAGCACGCTTTGAAACAACGAAAGG GATCGAAACGATGGACGGGTTCGTTCGCATGCAAGTGTTGACGGATACGTCTGATGCGGCGATGGACCATGTCGTCATCA TGACCACTTGGCGTGATGCAGCAAGCTTTGAGAACTGGCGTGACAGCAATGCCTATAAGCATGCCCATAAGAAGCGTGAT GATGGGACTTCAGAAGTGAAACCAATCGTCCTCGGCAACACCGTTACCCAATATGAGGTTGCCATTGAACATCTCGCCTC AACGGAGCGCGTTCAATAA
Upstream 100 bases:
>100_bases GAAGAATGGTGGAGCAGACGTTGAGTGAGCATCCTTTTTCAGGCATTTCCCTGTTCACGTTATAATGGAGTCATCTTATT CGTATAGGGGGAAATGTGGG
Downstream 100 bases:
>100_bases ATCTTGAGGCCGGACGATGCCAAGTAACGGTTCATCCGGATTTCCGGTCTCTGTAATCAGAAGGGCGTCATATCGTGCGC CCTCTTTCATTTGCGTAAAG
Product: Antibiotic biosynthesis monooxygenase
Products: NA
Alternate protein names: Heme oxygenase; Iron-regulated surface determinant isdG; Iron-responsive surface determinant isdG [H]
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MWIVMNKLDVEKGKADAVKARFETTKGIETMDGFVRMQVLTDTSDAAMDHVVIMTTWRDAASFENWRDSNAYKHAHKKRD DGTSEVKPIVLGNTVTQYEVAIEHLASTERVQ
Sequences:
>Translated_112_residues MWIVMNKLDVEKGKADAVKARFETTKGIETMDGFVRMQVLTDTSDAAMDHVVIMTTWRDAASFENWRDSNAYKHAHKKRD DGTSEVKPIVLGNTVTQYEVAIEHLASTERVQ >Mature_112_residues MWIVMNKLDVEKGKADAVKARFETTKGIETMDGFVRMQVLTDTSDAAMDHVVIMTTWRDAASFENWRDSNAYKHAHKKRD DGTSEVKPIVLGNTVTQYEVAIEHLASTERVQ
Specific function: Allows bacterial pathogens to use the host heme as an iron source. Catalyzes the oxidative degradation of the heme macrocyclic porphyrin ring in the presence of a suitable electron donor such as ascorbate or NADPH--cytochrome P450 reductase, with subseque
COG id: COG2329
COG function: function code R; Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the antibiotic biosynthesis monooxygenase family. Heme-degrading monooxygenase isdG subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007138 - InterPro: IPR011008 [H]
Pfam domain/function: PF03992 ABM [H]
EC number: =1.14.99.3 [H]
Molecular weight: Translated: 12716; Mature: 12716
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWIVMNKLDVEKGKADAVKARFETTKGIETMDGFVRMQVLTDTSDAAMDHVVIMTTWRDA CEEEECCCCCCCCCCHHHHHHHHCCCCCHHHCCEEEEEEEECCCCCCCCEEEEEEECCCC ASFENWRDSNAYKHAHKKRDDGTSEVKPIVLGNTVTQYEVAIEHLASTERVQ CCCCCCCCCCHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MWIVMNKLDVEKGKADAVKARFETTKGIETMDGFVRMQVLTDTSDAAMDHVVIMTTWRDA CEEEECCCCCCCCCCHHHHHHHHCCCCCHHHCCEEEEEEEECCCCCCCCEEEEEEECCCC ASFENWRDSNAYKHAHKKRDDGTSEVKPIVLGNTVTQYEVAIEHLASTERVQ CCCCCCCCCCHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA