| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917570
Identifier: 229917570
GI number: 229917570
Start: 1816346
End: 1816861
Strand: Reverse
Name: 229917570
Synonym: EAT1b_1845
Alternate gene names: NA
Gene position: 1816861-1816346 (Counterclockwise)
Preceding gene: 229917571
Following gene: 229917569
Centisome position: 60.56
GC content: 48.64
Gene sequence:
>516_bases ATGTCAGATCGAAAAATGATTGGCCTGTTCCAGAGCGAACAGGAAGTCATGCACAAAGTGGAAGAGCTGAAAGCCGCAGG GGAAGCTGAAAAGAATATGCATGTGGTCGCCAAGCGGGACGGGGAAATTTCTGCGTTACGTGACCACACGGATGTGAATG CCGAGTCCGGTATCCGTGACGTCAATTGGCTTGACCGTGTCAAAGCATTCCTACACGGAAGTGACCGCATTCGTGATGAG TTACGCAATATGGGGCTCAACGATGCCGAAGCGGAACAGTATTATGATGCCATCGATGAAGGACAGATTTTACTCTACAT CGATCGCCACTCGTACGACCGCTATCCGAACATGTATAAGAAAGACAGTGAGCTCGATCATGATAAAGGGGAAAAGGCGG ACGGGATTGCCTTTGACGCAAAACCATTTAACGATCACGACGAGAATCCACGTGGCACAAAGGATGATCCGATTGTACGC GGTCATTCTGGATTAGAAGATCATCGCCGATTATAA
Upstream 100 bases:
>100_bases TCTTAGGAGATGGCGTTTTTTGTTTCAATTATGGCGAGAACGGAAATTACTCCTATTGTGACGCTTGTTTTTAGATTGGA AATTCTAAAGGGGGTATTCG
Downstream 100 bases:
>100_bases GGAGGAACGACTATGAATGAGAAACGATTTATCAGTATGCACGATACGCAGGATGCAGCCCTTGGGAAAATCGAGGAGTT GCGAGCGAAAGGGTATGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MSDRKMIGLFQSEQEVMHKVEELKAAGEAEKNMHVVAKRDGEISALRDHTDVNAESGIRDVNWLDRVKAFLHGSDRIRDE LRNMGLNDAEAEQYYDAIDEGQILLYIDRHSYDRYPNMYKKDSELDHDKGEKADGIAFDAKPFNDHDENPRGTKDDPIVR GHSGLEDHRRL
Sequences:
>Translated_171_residues MSDRKMIGLFQSEQEVMHKVEELKAAGEAEKNMHVVAKRDGEISALRDHTDVNAESGIRDVNWLDRVKAFLHGSDRIRDE LRNMGLNDAEAEQYYDAIDEGQILLYIDRHSYDRYPNMYKKDSELDHDKGEKADGIAFDAKPFNDHDENPRGTKDDPIVR GHSGLEDHRRL >Mature_170_residues SDRKMIGLFQSEQEVMHKVEELKAAGEAEKNMHVVAKRDGEISALRDHTDVNAESGIRDVNWLDRVKAFLHGSDRIRDEL RNMGLNDAEAEQYYDAIDEGQILLYIDRHSYDRYPNMYKKDSELDHDKGEKADGIAFDAKPFNDHDENPRGTKDDPIVRG HSGLEDHRRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19722; Mature: 19591
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRKMIGLFQSEQEVMHKVEELKAAGEAEKNMHVVAKRDGEISALRDHTDVNAESGIRD CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEHHHCCCCCCHHCCCCC VNWLDRVKAFLHGSDRIRDELRNMGLNDAEAEQYYDAIDEGQILLYIDRHSYDRYPNMYK HHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC KDSELDHDKGEKADGIAFDAKPFNDHDENPRGTKDDPIVRGHSGLEDHRRL CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEECCCCCCHHHCCC >Mature Secondary Structure SDRKMIGLFQSEQEVMHKVEELKAAGEAEKNMHVVAKRDGEISALRDHTDVNAESGIRD CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEHHHCCCCCCHHCCCCC VNWLDRVKAFLHGSDRIRDELRNMGLNDAEAEQYYDAIDEGQILLYIDRHSYDRYPNMYK HHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC KDSELDHDKGEKADGIAFDAKPFNDHDENPRGTKDDPIVRGHSGLEDHRRL CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEECCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA