BacMap

Definition	Exiguobacterium sp. AT1b, complete genome.
Accession	NC_012673
Length	2,999,895

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The map label for this gene is cpnA [H]

Identifier: 229917539

GI number: 229917539

Start: 1780436

End: 1781185

Strand: Direct

Name: cpnA [H]

Synonym: EAT1b_1814

Alternate gene names: 229917539

Gene position: 1780436-1781185 (Clockwise)

Preceding gene: 229917533

Following gene: 229917540

Centisome position: 59.35

GC content: 54.0

Gene sequence:

>750_bases
ATGCGTTTACAGGGGAAAGTAGCGGTCATCACAGGGGCAGGAAGCGGTATGGGAGAGTCAACGGCACGCCTATTCGCCAA
AGAAGGGGCGACGGTCGTCGCAACAGATATCAATGAACAAGGGGTACAAAGCGTAGTCGAGTCGATTCGGGCGCAAGGTG
GGGAAGCTATCGCGGTGAAGCATGACGTGACCTCACGTTCGAGCTGGGAGGACGTATTCGCAGAAGTGGAAGCGACGTGT
GGCAAATTAGATATTCTCGTCAATAACGCTGGAATCGCACTTGCGAAACCGTTCTTGGAACAGACGGAAGAGGACTGGGC
ACGCACGTATCGCATCAACATCGATGGAGTCATGTTAGGGACACAGTACGCGATTCCGCTCATGACGGAGAATGGGGGAG
GATCAATCGTCAACATCTCCTCCATCTCTGCATTGACCGGTATGGCGGGTGCCGGGGCCTATACAGCCTCGAAAGGTGCG
GTCCGTTCTCTCACGAAAGCAGCGGCCGTCGATTACGGGAAACGAAACATTCGGGTCAACTCGGTGCATCCAGGCTATAT
CGTGACACCGATGAGTGCGCCACATATGGAGCACCCAGACTATAAACAACATTTCTTGAATCAAATCGCCTTGCCGAATC
TCGGACAAGCGGATGAGGTGGCAGCAGCCGTCCTATTCCTCGCGTCAGACGAGGCAAATCATATTAGCGGAATCGAACTT
CCGGTAGACGGTGGCGTGACGGCGAAATAA

Upstream 100 bases:

>100_bases
CTAGTATATCGTCTTCGAGCAGTTTCGTTGAGATTAATGTCACATCCAATTATGATTATGATAGTTAGACTATCATAATT
TAATGAATGGAGCTGGGACA

Downstream 100 bases:

>100_bases
TCGAGAGAGCATCCTGATGTGATGACACCTCGTGTTATATTAAGAAAAAGAGGTGAAGTCATGATTCAGTTTGAGATGGA
ACGAGTATGGATGGATGAAA

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MRLQGKVAVITGAGSGMGESTARLFAKEGATVVATDINEQGVQSVVESIRAQGGEAIAVKHDVTSRSSWEDVFAEVEATC
GKLDILVNNAGIALAKPFLEQTEEDWARTYRINIDGVMLGTQYAIPLMTENGGGSIVNISSISALTGMAGAGAYTASKGA
VRSLTKAAAVDYGKRNIRVNSVHPGYIVTPMSAPHMEHPDYKQHFLNQIALPNLGQADEVAAAVLFLASDEANHISGIEL
PVDGGVTAK

Sequences:

>Translated_249_residues
MRLQGKVAVITGAGSGMGESTARLFAKEGATVVATDINEQGVQSVVESIRAQGGEAIAVKHDVTSRSSWEDVFAEVEATC
GKLDILVNNAGIALAKPFLEQTEEDWARTYRINIDGVMLGTQYAIPLMTENGGGSIVNISSISALTGMAGAGAYTASKGA
VRSLTKAAAVDYGKRNIRVNSVHPGYIVTPMSAPHMEHPDYKQHFLNQIALPNLGQADEVAAAVLFLASDEANHISGIEL
PVDGGVTAK
>Mature_249_residues
MRLQGKVAVITGAGSGMGESTARLFAKEGATVVATDINEQGVQSVVESIRAQGGEAIAVKHDVTSRSSWEDVFAEVEATC
GKLDILVNNAGIALAKPFLEQTEEDWARTYRINIDGVMLGTQYAIPLMTENGGGSIVNISSISALTGMAGAGAYTASKGA
VRSLTKAAAVDYGKRNIRVNSVHPGYIVTPMSAPHMEHPDYKQHFLNQIALPNLGQADEVAAAVLFLASDEANHISGIEL
PVDGGVTAK

Specific function: Reduces cyclopentanol to cyclopentanone. The enzyme also shows considerable activity toward cyclohexanol [H]

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=254, Percent_Identity=35.0393700787402, Blast_Score=135, Evalue=4e-32,
Organism=Homo sapiens, GI7705925, Length=247, Percent_Identity=34.412955465587, Blast_Score=132, Evalue=3e-31,
Organism=Homo sapiens, GI32483357, Length=251, Percent_Identity=33.0677290836653, Blast_Score=130, Evalue=8e-31,
Organism=Homo sapiens, GI40254992, Length=241, Percent_Identity=33.6099585062241, Blast_Score=127, Evalue=1e-29,
Organism=Homo sapiens, GI66933014, Length=249, Percent_Identity=33.7349397590361, Blast_Score=122, Evalue=3e-28,
Organism=Homo sapiens, GI5031737, Length=243, Percent_Identity=30.4526748971193, Blast_Score=114, Evalue=7e-26,
Organism=Homo sapiens, GI59889578, Length=232, Percent_Identity=36.6379310344828, Blast_Score=111, Evalue=5e-25,
Organism=Homo sapiens, GI126723750, Length=251, Percent_Identity=29.4820717131474, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI31542939, Length=247, Percent_Identity=31.5789473684211, Blast_Score=106, Evalue=2e-23,
Organism=Homo sapiens, GI4504505, Length=193, Percent_Identity=33.6787564766839, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI126723191, Length=185, Percent_Identity=34.0540540540541, Blast_Score=99, Evalue=4e-21,
Organism=Homo sapiens, GI33667109, Length=191, Percent_Identity=32.4607329842932, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI40807363, Length=191, Percent_Identity=31.413612565445, Blast_Score=95, Evalue=7e-20,
Organism=Homo sapiens, GI4758504, Length=258, Percent_Identity=31.3953488372093, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI224922801, Length=176, Percent_Identity=35.7954545454545, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI19923817, Length=252, Percent_Identity=26.1904761904762, Blast_Score=89, Evalue=2e-18,
Organism=Homo sapiens, GI210032110, Length=189, Percent_Identity=31.2169312169312, Blast_Score=87, Evalue=9e-18,
Organism=Homo sapiens, GI10190704, Length=245, Percent_Identity=28.9795918367347, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI20149619, Length=196, Percent_Identity=31.1224489795918, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI4503301, Length=250, Percent_Identity=28, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI226371731, Length=200, Percent_Identity=29, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI142976729, Length=206, Percent_Identity=28.1553398058252, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI302344755, Length=107, Percent_Identity=40.1869158878505, Blast_Score=78, Evalue=7e-15,
Organism=Homo sapiens, GI310128830, Length=226, Percent_Identity=26.5486725663717, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI310115468, Length=226, Percent_Identity=26.5486725663717, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI83715985, Length=181, Percent_Identity=32.5966850828729, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI209862901, Length=209, Percent_Identity=28.7081339712919, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI19923983, Length=209, Percent_Identity=28.7081339712919, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI7705855, Length=205, Percent_Identity=29.2682926829268, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI109715829, Length=241, Percent_Identity=24.0663900414938, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI4503817, Length=193, Percent_Identity=28.4974093264249, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI25282469, Length=182, Percent_Identity=31.3186813186813, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI4557649, Length=198, Percent_Identity=28.7878787878788, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI40548397, Length=215, Percent_Identity=27.906976744186, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI214010158, Length=215, Percent_Identity=27.906976744186, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI214010156, Length=215, Percent_Identity=27.906976744186, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI22758144, Length=215, Percent_Identity=27.906976744186, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI7657478, Length=194, Percent_Identity=29.3814432989691, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI150247226, Length=215, Percent_Identity=28.3720930232558, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI19743808, Length=194, Percent_Identity=30.9278350515464, Blast_Score=64, Evalue=9e-11,
Organism=Escherichia coli, GI1787905, Length=245, Percent_Identity=39.1836734693878, Blast_Score=150, Evalue=7e-38,
Organism=Escherichia coli, GI87082100, Length=253, Percent_Identity=35.9683794466403, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1788459, Length=242, Percent_Identity=34.7107438016529, Blast_Score=138, Evalue=4e-34,
Organism=Escherichia coli, GI1790717, Length=244, Percent_Identity=32.3770491803279, Blast_Score=136, Evalue=1e-33,
Organism=Escherichia coli, GI1787335, Length=246, Percent_Identity=34.5528455284553, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI87082160, Length=250, Percent_Identity=31.2, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1789208, Length=248, Percent_Identity=31.0483870967742, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=35.5102040816327, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1786812, Length=255, Percent_Identity=31.3725490196078, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1789378, Length=238, Percent_Identity=30.672268907563, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787820, Length=242, Percent_Identity=29.7520661157025, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI2367365, Length=250, Percent_Identity=33.2, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1789057, Length=253, Percent_Identity=28.8537549407115, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1787526, Length=247, Percent_Identity=25.5060728744939, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788891, Length=177, Percent_Identity=28.2485875706215, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115534694, Length=243, Percent_Identity=35.8024691358025, Blast_Score=130, Evalue=6e-31,
Organism=Caenorhabditis elegans, GI17560676, Length=251, Percent_Identity=32.2709163346614, Blast_Score=130, Evalue=8e-31,
Organism=Caenorhabditis elegans, GI25147288, Length=248, Percent_Identity=33.4677419354839, Blast_Score=125, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17555706, Length=245, Percent_Identity=31.8367346938775, Blast_Score=123, Evalue=7e-29,
Organism=Caenorhabditis elegans, GI17561402, Length=253, Percent_Identity=32.8063241106719, Blast_Score=122, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17559104, Length=260, Percent_Identity=33.8461538461538, Blast_Score=115, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17560150, Length=261, Percent_Identity=34.8659003831418, Blast_Score=112, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17538480, Length=263, Percent_Identity=31.5589353612167, Blast_Score=111, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI17560332, Length=263, Percent_Identity=33.4600760456274, Blast_Score=111, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI71994600, Length=247, Percent_Identity=34.8178137651822, Blast_Score=110, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI193203117, Length=193, Percent_Identity=36.7875647668394, Blast_Score=109, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI193203115, Length=191, Percent_Identity=37.17277486911, Blast_Score=107, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17551412, Length=263, Percent_Identity=31.1787072243346, Blast_Score=106, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI17562990, Length=260, Percent_Identity=34.2307692307692, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17562906, Length=270, Percent_Identity=31.8518518518519, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17538182, Length=258, Percent_Identity=33.7209302325581, Blast_Score=103, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI17562904, Length=268, Percent_Identity=31.7164179104478, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17568967, Length=216, Percent_Identity=32.4074074074074, Blast_Score=101, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17508895, Length=192, Percent_Identity=33.8541666666667, Blast_Score=101, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI71994604, Length=246, Percent_Identity=31.7073170731707, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI193204405, Length=267, Percent_Identity=30.3370786516854, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17562910, Length=264, Percent_Identity=31.0606060606061, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17544670, Length=266, Percent_Identity=29.6992481203008, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17562908, Length=262, Percent_Identity=29.7709923664122, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17564282, Length=192, Percent_Identity=32.8125, Blast_Score=94, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17567345, Length=192, Percent_Identity=30.7291666666667, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI72000259, Length=261, Percent_Identity=29.1187739463602, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17531453, Length=268, Percent_Identity=32.4626865671642, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17563726, Length=260, Percent_Identity=28.8461538461538, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17565030, Length=265, Percent_Identity=29.811320754717, Blast_Score=91, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17538486, Length=263, Percent_Identity=30.0380228136882, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17560220, Length=265, Percent_Identity=30.9433962264151, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17536651, Length=258, Percent_Identity=32.5581395348837, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17536025, Length=253, Percent_Identity=30.0395256916996, Blast_Score=87, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17555612, Length=250, Percent_Identity=30, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17508651, Length=256, Percent_Identity=28.515625, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17507613, Length=258, Percent_Identity=28.2945736434109, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI32563809, Length=258, Percent_Identity=28.2945736434109, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71997099, Length=205, Percent_Identity=30.7317073170732, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17561272, Length=253, Percent_Identity=28.8537549407115, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17558006, Length=209, Percent_Identity=27.7511961722488, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=239, Percent_Identity=28.4518828451883, Blast_Score=89, Evalue=4e-19,
Organism=Saccharomyces cerevisiae, GI6322227, Length=196, Percent_Identity=27.0408163265306, Blast_Score=65, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=248, Percent_Identity=23.7903225806452, Blast_Score=63, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=240, Percent_Identity=25.4166666666667, Blast_Score=63, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24639444, Length=248, Percent_Identity=39.1129032258064, Blast_Score=148, Evalue=3e-36,
Organism=Drosophila melanogaster, GI24643142, Length=243, Percent_Identity=36.2139917695473, Blast_Score=138, Evalue=3e-33,
Organism=Drosophila melanogaster, GI21355319, Length=249, Percent_Identity=34.9397590361446, Blast_Score=136, Evalue=1e-32,
Organism=Drosophila melanogaster, GI24644339, Length=250, Percent_Identity=36, Blast_Score=135, Evalue=3e-32,
Organism=Drosophila melanogaster, GI21357041, Length=248, Percent_Identity=35.0806451612903, Blast_Score=134, Evalue=7e-32,
Organism=Drosophila melanogaster, GI28571526, Length=249, Percent_Identity=35.7429718875502, Blast_Score=132, Evalue=2e-31,
Organism=Drosophila melanogaster, GI23397609, Length=249, Percent_Identity=33.7349397590361, Blast_Score=129, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24640492, Length=230, Percent_Identity=32.1739130434783, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24644337, Length=251, Percent_Identity=34.6613545816733, Blast_Score=111, Evalue=4e-25,
Organism=Drosophila melanogaster, GI18859837, Length=193, Percent_Identity=34.7150259067358, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI281364892, Length=203, Percent_Identity=31.0344827586207, Blast_Score=99, Evalue=2e-21,
Organism=Drosophila melanogaster, GI17737361, Length=233, Percent_Identity=32.618025751073, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24581726, Length=210, Percent_Identity=30.4761904761905, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI21358495, Length=195, Percent_Identity=29.7435897435897, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21355631, Length=159, Percent_Identity=32.7044025157233, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI28571387, Length=242, Percent_Identity=30.1652892561983, Blast_Score=84, Evalue=6e-17,
Organism=Drosophila melanogaster, GI28574402, Length=194, Percent_Identity=30.4123711340206, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24584744, Length=194, Percent_Identity=30.4123711340206, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI221331218, Length=204, Percent_Identity=28.921568627451, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24665243, Length=242, Percent_Identity=26.8595041322314, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24665247, Length=242, Percent_Identity=26.8595041322314, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI161076933, Length=193, Percent_Identity=30.0518134715026, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24584748, Length=193, Percent_Identity=30.0518134715026, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI221331216, Length=204, Percent_Identity=28.921568627451, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24649181, Length=199, Percent_Identity=27.1356783919598, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21356301, Length=191, Percent_Identity=28.2722513089005, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI221510726, Length=191, Percent_Identity=28.2722513089005, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24641232, Length=200, Percent_Identity=32, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24647946, Length=218, Percent_Identity=27.9816513761468, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI45553409, Length=217, Percent_Identity=28.110599078341, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24647948, Length=217, Percent_Identity=28.110599078341, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI116007236, Length=240, Percent_Identity=29.1666666666667, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24584752, Length=192, Percent_Identity=28.125, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24640442, Length=194, Percent_Identity=27.8350515463918, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.163 [H]

Molecular weight: Translated: 26066; Mature: 26066

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLQGKVAVITGAGSGMGESTARLFAKEGATVVATDINEQGVQSVVESIRAQGGEAIAVK
CCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEE
HDVTSRSSWEDVFAEVEATCGKLDILVNNAGIALAKPFLEQTEEDWARTYRINIDGVMLG
ECCCCCCCHHHHHHHHHHCCCEEEEEEECCCCEEHHHHHHHHHHHHHEEEEEEECEEEEC
TQYAIPLMTENGGGSIVNISSISALTGMAGAGAYTASKGAVRSLTKAAAVDYGKRNIRVN
CEEEEEEEEECCCCCEEEECHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEE
SVHPGYIVTPMSAPHMEHPDYKQHFLNQIALPNLGQADEVAAAVLFLASDEANHISGIEL
EECCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHEEEEEEECCCCCCCCCEEE
PVDGGVTAK
ECCCCCCCC
>Mature Secondary Structure
MRLQGKVAVITGAGSGMGESTARLFAKEGATVVATDINEQGVQSVVESIRAQGGEAIAVK
CCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEE
HDVTSRSSWEDVFAEVEATCGKLDILVNNAGIALAKPFLEQTEEDWARTYRINIDGVMLG
ECCCCCCCHHHHHHHHHHCCCEEEEEEECCCCEEHHHHHHHHHHHHHEEEEEEECEEEEC
TQYAIPLMTENGGGSIVNISSISALTGMAGAGAYTASKGAVRSLTKAAAVDYGKRNIRVN
CEEEEEEEEECCCCCEEEECHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEE
SVHPGYIVTPMSAPHMEHPDYKQHFLNQIALPNLGQADEVAAAVLFLASDEANHISGIEL
EECCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHEEEEEEECCCCCCCCCEEE
PVDGGVTAK
ECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12406764 [H]