| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is 229917505
Identifier: 229917505
GI number: 229917505
Start: 1746840
End: 1747505
Strand: Direct
Name: 229917505
Synonym: EAT1b_1780
Alternate gene names: NA
Gene position: 1746840-1747505 (Clockwise)
Preceding gene: 229917503
Following gene: 229917506
Centisome position: 58.23
GC content: 43.69
Gene sequence:
>666_bases ATGAAACACGCAGTGATTTTTGACATGGACGGAACATTGTTTCGGACAGATTTGATTTTGGAACGGGCGCTAGATGAAAC GTTTGATCATTTACGAAGTGAAGAAAAATGGAAAGGTCCGACACCGATTGATCAATATCGGAACATCATGGGGGTACCGT TGCCAGTTGTTTGGAACACATTGCTCCCACAATACGATGAGCAAACTAGAGAAGAGGTCGATGCCTATTTCTTAACACGA CTCATCAAAAACATTGAAAACGGGAATGGAGCATTATATGCAGGGGTACTCGAACTATTTGAACAATTGTATCAAATGGG GCATTCCATCTTCGTCGCAAGCAATGGTTTGGTGGACTATTTACAAGCCATCGTCACGCGTTATGAATTGGATCGTTGGA TCACAGAAACTTATAGCATTCAACAAATCGACACGTTGGATAAGGGCGATTTGGTGGCTGAAATCGTGAAGAAGTATGAA CTGCAGGAGGGCTTCGTGGTAGGTGACCGATTATCGGATATCTCGGCTGCACGAGCGAACGGACTCATTTCAATCGGCTG TCGTTTTGACTTCGCACAAGAAGTAGAGTTACAAGAAGCGAATTACGTTGTGAATCACTTGGCAGAAGTTCTCGATATCG TTTCAAAGGAGACGGCTTCGCTATAA
Upstream 100 bases:
>100_bases CTTACTCGAGCTATACGAAGTACGAAACGATGAGTTGAATTGACAGAAGTTGTCGTATGATAGACAGACAACCATGATTC GATTAACGAGGGGGAAGCGG
Downstream 100 bases:
>100_bases GTGAATCGATTTCTGGATTGGACTCGTAAGTAAAGGACTACAACAAATCGGAGGGATCATCATGCACACGCTCTACATGA AACAAAAAGTGTTAAGCTTA
Product: Haloacid dehalogenase domain protein hydrolase
Products: NA
Alternate protein names: Phosphatase; Phosphatase HAD Family; 5-Methylthioadenosine/S-Adenosylhomocysteine Nucleosidase; Hydrolase; Haloacid Dehalogenase-Like Hydrolase; HAD Family Hydrolase; HAD Superfamily Hydrolase; Phosphoglycolate Phosphatase; HAD-Superfamily Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; MTA/SAH Nucleosidase C-Terminal Region; Haloacid Dehalogenase Domain-Containing Protein Hydrolase
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MKHAVIFDMDGTLFRTDLILERALDETFDHLRSEEKWKGPTPIDQYRNIMGVPLPVVWNTLLPQYDEQTREEVDAYFLTR LIKNIENGNGALYAGVLELFEQLYQMGHSIFVASNGLVDYLQAIVTRYELDRWITETYSIQQIDTLDKGDLVAEIVKKYE LQEGFVVGDRLSDISAARANGLISIGCRFDFAQEVELQEANYVVNHLAEVLDIVSKETASL
Sequences:
>Translated_221_residues MKHAVIFDMDGTLFRTDLILERALDETFDHLRSEEKWKGPTPIDQYRNIMGVPLPVVWNTLLPQYDEQTREEVDAYFLTR LIKNIENGNGALYAGVLELFEQLYQMGHSIFVASNGLVDYLQAIVTRYELDRWITETYSIQQIDTLDKGDLVAEIVKKYE LQEGFVVGDRLSDISAARANGLISIGCRFDFAQEVELQEANYVVNHLAEVLDIVSKETASL >Mature_221_residues MKHAVIFDMDGTLFRTDLILERALDETFDHLRSEEKWKGPTPIDQYRNIMGVPLPVVWNTLLPQYDEQTREEVDAYFLTR LIKNIENGNGALYAGVLELFEQLYQMGHSIFVASNGLVDYLQAIVTRYELDRWITETYSIQQIDTLDKGDLVAEIVKKYE LQEGFVVGDRLSDISAARANGLISIGCRFDFAQEVELQEANYVVNHLAEVLDIVSKETASL
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25256; Mature: 25256
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHAVIFDMDGTLFRTDLILERALDETFDHLRSEEKWKGPTPIDQYRNIMGVPLPVVWNT CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHH LLPQYDEQTREEVDAYFLTRLIKNIENGNGALYAGVLELFEQLYQMGHSIFVASNGLVDY HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHH LQAIVTRYELDRWITETYSIQQIDTLDKGDLVAEIVKKYELQEGFVVGDRLSDISAARAN HHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHC GLISIGCRFDFAQEVELQEANYVVNHLAEVLDIVSKETASL CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKHAVIFDMDGTLFRTDLILERALDETFDHLRSEEKWKGPTPIDQYRNIMGVPLPVVWNT CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHH LLPQYDEQTREEVDAYFLTRLIKNIENGNGALYAGVLELFEQLYQMGHSIFVASNGLVDY HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHH LQAIVTRYELDRWITETYSIQQIDTLDKGDLVAEIVKKYELQEGFVVGDRLSDISAARAN HHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHC GLISIGCRFDFAQEVELQEANYVVNHLAEVLDIVSKETASL CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA