| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is lip2 [H]
Identifier: 229917500
GI number: 229917500
Start: 1741029
End: 1742105
Strand: Direct
Name: lip2 [H]
Synonym: EAT1b_1775
Alternate gene names: 229917500
Gene position: 1741029-1742105 (Clockwise)
Preceding gene: 229917497
Following gene: 229917501
Centisome position: 58.04
GC content: 51.44
Gene sequence:
>1077_bases ATGGAATCCGATTATAAATATCTCGTCCAACATCTTCAACAAAGCCAATATCGAACGCACGCGAACCACCTTGAAACCAT CATCAAACCCATACCGGATTCAGACCGCACCGGCGATCTCGACTCACGCGTGTTCGAAACGCTGACCGCGAATCATTCTT CACACGATGAACCGGATACAGCATTTGACCTCGAGGCGGCACGTGCCAGCATGGGTTGGCCGAATCAGGATCGGACGACG ACTGACATCAAAACGGAGTATCTCATGATTCCTAGTGAGGACGGGGATATTCCGGTCCGTCTGTATCGTCCGAGTCATAC TGAAGCCATCCCAGTCATCCTCTTCTTCCATGGTGGCGGGTTCTTCGGCGGAACGCTCGATACGGTCGAGAATCCTTGTA AATTGCTTTCGGAACGGGCGAACGCGGTCGTCATCTCCGTCGATTATCGTCTTGCCCCGGAGCATCCGTTCCCGGCCGGA TTGAATGACTGTTACCGCGCCTTTGAATGGGTACACGCACATTCGAATGAATTGAACATCCTCAAAGACCGAATCGGCGT CGCCGGAGACAGTGCCGGAGGAAATTTGGCAACGGCTTGCTGTCTGATGGAGCAAGAACGAGGGGAGGGGCGCATTTGTT ATCAAGCACTCGTCTATCCTGTCGTCAATCTGGGAACGATTCCGACAGATGATTTTGAATGGGCACTCGATGCGTACGAT ATCTCACACCATCACGATCTGATTCGAGGTGTCGTGCTCGCACTCGCCGATGCGGACTCATTTTTTAATGACCTCTATCT TCAAGGAATGGCGGATGTCACACATCCACTCGTATCACCATTATTCGCAGACGATTTCTCGAGTTTACCACCGACTTTGA TTGTGACGGCCGAGTACGATTACTTACGACTTGAAGGAGAAGCGTATGCGCGGAAACTTTCAGGAGCGGGCGTTCCAACA CGACTCGTTCAATATCGTGGGATGGACCATGCCTTCATGGACAAGTTGGGCGACTATCCACAGGCAGACGATTGCATGAA TGAAATCGCAAAAGGACTGAAGGAGCTGACGAAATGA
Upstream 100 bases:
>100_bases TCTGTTCCAACAACGTATCATGCGATGAGCCGATGTACAACTTTTCCCGATAACAATATTTTTATAGGTTCAGAAACATT GAAAGAAAGGGGCTTACATA
Downstream 100 bases:
>100_bases AACAGTATACATTGGATTGGACGCGTTATGAGGAATTGGCACGTCAAGCGGTCGCGGAAGGCGTCGTATTAGTTAAAAAC GAACAGAAGACCCTCCCGTT
Product: alpha/beta hydrolase fold-3 domain protein
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MESDYKYLVQHLQQSQYRTHANHLETIIKPIPDSDRTGDLDSRVFETLTANHSSHDEPDTAFDLEAARASMGWPNQDRTT TDIKTEYLMIPSEDGDIPVRLYRPSHTEAIPVILFFHGGGFFGGTLDTVENPCKLLSERANAVVISVDYRLAPEHPFPAG LNDCYRAFEWVHAHSNELNILKDRIGVAGDSAGGNLATACCLMEQERGEGRICYQALVYPVVNLGTIPTDDFEWALDAYD ISHHHDLIRGVVLALADADSFFNDLYLQGMADVTHPLVSPLFADDFSSLPPTLIVTAEYDYLRLEGEAYARKLSGAGVPT RLVQYRGMDHAFMDKLGDYPQADDCMNEIAKGLKELTK
Sequences:
>Translated_358_residues MESDYKYLVQHLQQSQYRTHANHLETIIKPIPDSDRTGDLDSRVFETLTANHSSHDEPDTAFDLEAARASMGWPNQDRTT TDIKTEYLMIPSEDGDIPVRLYRPSHTEAIPVILFFHGGGFFGGTLDTVENPCKLLSERANAVVISVDYRLAPEHPFPAG LNDCYRAFEWVHAHSNELNILKDRIGVAGDSAGGNLATACCLMEQERGEGRICYQALVYPVVNLGTIPTDDFEWALDAYD ISHHHDLIRGVVLALADADSFFNDLYLQGMADVTHPLVSPLFADDFSSLPPTLIVTAEYDYLRLEGEAYARKLSGAGVPT RLVQYRGMDHAFMDKLGDYPQADDCMNEIAKGLKELTK >Mature_358_residues MESDYKYLVQHLQQSQYRTHANHLETIIKPIPDSDRTGDLDSRVFETLTANHSSHDEPDTAFDLEAARASMGWPNQDRTT TDIKTEYLMIPSEDGDIPVRLYRPSHTEAIPVILFFHGGGFFGGTLDTVENPCKLLSERANAVVISVDYRLAPEHPFPAG LNDCYRAFEWVHAHSNELNILKDRIGVAGDSAGGNLATACCLMEQERGEGRICYQALVYPVVNLGTIPTDDFEWALDAYD ISHHHDLIRGVVLALADADSFFNDLYLQGMADVTHPLVSPLFADDFSSLPPTLIVTAEYDYLRLEGEAYARKLSGAGVPT RLVQYRGMDHAFMDKLGDYPQADDCMNEIAKGLKELTK
Specific function: Has An Esterase Activity. Triacetyl Glycerol (Triacetin) Is A Substrate Of The Enzyme. [C]
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI157041239, Length=285, Percent_Identity=27.3684210526316, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI68299767, Length=299, Percent_Identity=26.4214046822742, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI206597554, Length=272, Percent_Identity=29.7794117647059, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI21328446, Length=91, Percent_Identity=43.956043956044, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI61966717, Length=316, Percent_Identity=26.2658227848101, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI1786682, Length=272, Percent_Identity=27.9411764705882, Blast_Score=101, Evalue=1e-22, Organism=Caenorhabditis elegans, GI72001146, Length=315, Percent_Identity=27.6190476190476, Blast_Score=118, Evalue=4e-27, Organism=Caenorhabditis elegans, GI17567059, Length=289, Percent_Identity=30.7958477508651, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17540028, Length=175, Percent_Identity=28.5714285714286, Blast_Score=89, Evalue=5e-18, Organism=Caenorhabditis elegans, GI71996133, Length=141, Percent_Identity=31.2056737588652, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24656084, Length=99, Percent_Identity=38.3838383838384, Blast_Score=68, Evalue=9e-12, Organism=Drosophila melanogaster, GI24656076, Length=99, Percent_Identity=38.3838383838384, Blast_Score=68, Evalue=9e-12, Organism=Drosophila melanogaster, GI20130169, Length=99, Percent_Identity=38.3838383838384, Blast_Score=68, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 39928; Mature: 39928
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS01174 LIPASE_GDXG_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESDYKYLVQHLQQSQYRTHANHLETIIKPIPDSDRTGDLDSRVFETLTANHSSHDEPDT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC AFDLEAARASMGWPNQDRTTTDIKTEYLMIPSEDGDIPVRLYRPSHTEAIPVILFFHGGG HHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCEEEEEEEECCC FFGGTLDTVENPCKLLSERANAVVISVDYRLAPEHPFPAGLNDCYRAFEWVHAHSNELNI CCCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHH LKDRIGVAGDSAGGNLATACCLMEQERGEGRICYQALVYPVVNLGTIPTDDFEWALDAYD HHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH ISHHHDLIRGVVLALADADSFFNDLYLQGMADVTHPLVSPLFADDFSSLPPTLIVTAEYD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC YLRLEGEAYARKLSGAGVPTRLVQYRGMDHAFMDKLGDYPQADDCMNEIAKGLKELTK EEEECCHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MESDYKYLVQHLQQSQYRTHANHLETIIKPIPDSDRTGDLDSRVFETLTANHSSHDEPDT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC AFDLEAARASMGWPNQDRTTTDIKTEYLMIPSEDGDIPVRLYRPSHTEAIPVILFFHGGG HHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCEEEEEEEECCC FFGGTLDTVENPCKLLSERANAVVISVDYRLAPEHPFPAGLNDCYRAFEWVHAHSNELNI CCCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHH LKDRIGVAGDSAGGNLATACCLMEQERGEGRICYQALVYPVVNLGTIPTDDFEWALDAYD HHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH ISHHHDLIRGVVLALADADSFFNDLYLQGMADVTHPLVSPLFADDFSSLPPTLIVTAEYD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC YLRLEGEAYARKLSGAGVPTRLVQYRGMDHAFMDKLGDYPQADDCMNEIAKGLKELTK EEEECCHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1907455 [H]