| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is dbpA [H]
Identifier: 229917498
GI number: 229917498
Start: 1738982
End: 1740427
Strand: Reverse
Name: dbpA [H]
Synonym: EAT1b_1773
Alternate gene names: 229917498
Gene position: 1740427-1738982 (Counterclockwise)
Preceding gene: 229917499
Following gene: 229917496
Centisome position: 58.02
GC content: 52.21
Gene sequence:
>1446_bases ATGAACAAACAGCAATTTACTGATTATCGCCTGAGCGACGAGATCACGCGCGCGTTGGGCATTATGAAATACGAATCACC GACTGAAGTACAACAGCAGGTCATCCCGCGTGCGCTCGAGCGCGAAGACTTAGTCGTCAAAGCACAGACGGGAAGCGGAA AGACAGCTGCTTTCGGGATTCCGGTCATCGAGCTCATCGACTGGGCCGAAAATAAACCCCAAGTGCTCGTCTTGACGCCG ACACGCGAACTCGCCGTTCAAGTACGGGAAGACATGACGAACATCGGACGTTTTAAACGAATCAAAGCGACTGCCGTCTA CGGGAAAGAACCGTTTTCGAAACAACGTGAAGAGTTGAAACAAAAGACACATATCGTCGTCGGTACGCCAGGTCGCGTCA TGGACCATATCGAGCGTGAGACCCTTTCACTCGACCGCATCGAATACTTGATTATCGATGAGGCGGACGAGATGCTCAAC CGCGGCTTCCTCGCTGACGTCGAGAAGATTCTTCAACAGTTGCCGAAAGACCGCGTCACAATGGTCTTCTCAGCGACATT CCCACAAGATATCGAACGTCTCTGCCAGAAGCATATGAATGCTCCGGCACGTGTCGCGATCGAATCGACCGGCATGACCG CTTCGACAATCGAGCACCGTCTCCTCCCGGTTCACCGGAACGAGAAACTGGCTGTGCTTCAAGACATCACGGTCGTCGAG AACCCGGACAGCTGTATGATTTTCTGTCGGACGAAAGAGAACGTCGATACGGTGTACGCCGAGCTCGACAAAGCCGGTTA CTCGGCTGAACGCCTTCACGGCGGACTCGAGCAAGAGGACCGTTTCGCCGTCATGAACGGATTCAAGATGGGTAACTTCC GCTACCTCGTGGCGACAGACGTCGCAGCACGTGGAATCGATGTCGATAACGTCGAGCTCGTTATCAACTATGATGTTCCT GTCGAAAAGGAAAGTTACGTGCACCGGACAGGTCGTACCGGACGTGCCGGCAAACAAGGAACAGCGATCACGCTCATGAC CCGTCAGGAAGAACGTCTCATCGGAGCGATCGAATCATACGTTCAATTTGAGATTCCGATGATCGATGCACCGACAGAAG CGGAAGTTGCGGCTAACCAAGATGCCTTTGAGCAGAAGTTGAGCGGACGACGCGTCGTTCGAAACAACAAGACAGCTCGT ATTAACCAGGACATCATGAAGCTTCACTTCAGTGGCGGGAAGAAGAAAAAACTTCGCGCCGTCGACTTCGTCGGAACAAT CGCCAAAATCCCTGGTGTATCCGCTGACGACATCGGAATCATCACAATCAATGATCAGATGACGTACGTCGATATTCTGA ACGGAAAAGGTTCGATCGTCCTTCAAGCGATGGAGACGACGCCGGTCAAAGGGAAGAAACTCAAAGTAAGCAAAGCGCGT AAATAA
Upstream 100 bases:
>100_bases ATTCGCTTTCCTACCGTCTTTCGGTCTATAATGGACTGTATTGCAAATAGACATTGAAATTTTCTGAAGCAGAAGTTTTC ACGAAAGAATGAGGTTACCC
Downstream 100 bases:
>100_bases TACAAATCTAGCCTCAAAGATGATATTCGTCTTTGAGGTTTTTTGTTGTTTCACAAATTCCGAAAGCGCTTTCGATAAAC ACTAAAAAAATATGGCTTTT
Product: DEAD/DEAH box helicase domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MNKQQFTDYRLSDEITRALGIMKYESPTEVQQQVIPRALEREDLVVKAQTGSGKTAAFGIPVIELIDWAENKPQVLVLTP TRELAVQVREDMTNIGRFKRIKATAVYGKEPFSKQREELKQKTHIVVGTPGRVMDHIERETLSLDRIEYLIIDEADEMLN RGFLADVEKILQQLPKDRVTMVFSATFPQDIERLCQKHMNAPARVAIESTGMTASTIEHRLLPVHRNEKLAVLQDITVVE NPDSCMIFCRTKENVDTVYAELDKAGYSAERLHGGLEQEDRFAVMNGFKMGNFRYLVATDVAARGIDVDNVELVINYDVP VEKESYVHRTGRTGRAGKQGTAITLMTRQEERLIGAIESYVQFEIPMIDAPTEAEVAANQDAFEQKLSGRRVVRNNKTAR INQDIMKLHFSGGKKKKLRAVDFVGTIAKIPGVSADDIGIITINDQMTYVDILNGKGSIVLQAMETTPVKGKKLKVSKAR K
Sequences:
>Translated_481_residues MNKQQFTDYRLSDEITRALGIMKYESPTEVQQQVIPRALEREDLVVKAQTGSGKTAAFGIPVIELIDWAENKPQVLVLTP TRELAVQVREDMTNIGRFKRIKATAVYGKEPFSKQREELKQKTHIVVGTPGRVMDHIERETLSLDRIEYLIIDEADEMLN RGFLADVEKILQQLPKDRVTMVFSATFPQDIERLCQKHMNAPARVAIESTGMTASTIEHRLLPVHRNEKLAVLQDITVVE NPDSCMIFCRTKENVDTVYAELDKAGYSAERLHGGLEQEDRFAVMNGFKMGNFRYLVATDVAARGIDVDNVELVINYDVP VEKESYVHRTGRTGRAGKQGTAITLMTRQEERLIGAIESYVQFEIPMIDAPTEAEVAANQDAFEQKLSGRRVVRNNKTAR INQDIMKLHFSGGKKKKLRAVDFVGTIAKIPGVSADDIGIITINDQMTYVDILNGKGSIVLQAMETTPVKGKKLKVSKAR K >Mature_481_residues MNKQQFTDYRLSDEITRALGIMKYESPTEVQQQVIPRALEREDLVVKAQTGSGKTAAFGIPVIELIDWAENKPQVLVLTP TRELAVQVREDMTNIGRFKRIKATAVYGKEPFSKQREELKQKTHIVVGTPGRVMDHIERETLSLDRIEYLIIDEADEMLN RGFLADVEKILQQLPKDRVTMVFSATFPQDIERLCQKHMNAPARVAIESTGMTASTIEHRLLPVHRNEKLAVLQDITVVE NPDSCMIFCRTKENVDTVYAELDKAGYSAERLHGGLEQEDRFAVMNGFKMGNFRYLVATDVAARGIDVDNVELVINYDVP VEKESYVHRTGRTGRAGKQGTAITLMTRQEERLIGAIESYVQFEIPMIDAPTEAEVAANQDAFEQKLSGRRVVRNNKTAR INQDIMKLHFSGGKKKKLRAVDFVGTIAKIPGVSADDIGIITINDQMTYVDILNGKGSIVLQAMETTPVKGKKLKVSKAR K
Specific function: Has a helix-destabilizing activity. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. May function in rRNA maturation and ribosome biogenesis [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=366, Percent_Identity=34.9726775956284, Blast_Score=249, Evalue=3e-66, Organism=Homo sapiens, GI20149629, Length=415, Percent_Identity=34.2168674698795, Blast_Score=246, Evalue=4e-65, Organism=Homo sapiens, GI41327771, Length=412, Percent_Identity=35.6796116504854, Blast_Score=238, Evalue=8e-63, Organism=Homo sapiens, GI301171467, Length=433, Percent_Identity=34.8729792147806, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI301171475, Length=367, Percent_Identity=37.3297002724796, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI87196351, Length=367, Percent_Identity=37.3297002724796, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI169881239, Length=369, Percent_Identity=36.8563685636856, Blast_Score=231, Evalue=8e-61, Organism=Homo sapiens, GI13514809, Length=369, Percent_Identity=36.8563685636856, Blast_Score=231, Evalue=8e-61, Organism=Homo sapiens, GI148613856, Length=351, Percent_Identity=36.7521367521368, Blast_Score=228, Evalue=9e-60, Organism=Homo sapiens, GI38201710, Length=351, Percent_Identity=36.7521367521368, Blast_Score=228, Evalue=9e-60, Organism=Homo sapiens, GI41327773, Length=356, Percent_Identity=37.0786516853933, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI50659095, Length=395, Percent_Identity=34.9367088607595, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI4758138, Length=336, Percent_Identity=37.797619047619, Blast_Score=226, Evalue=5e-59, Organism=Homo sapiens, GI222352149, Length=357, Percent_Identity=36.9747899159664, Blast_Score=226, Evalue=5e-59, Organism=Homo sapiens, GI164664518, Length=362, Percent_Identity=32.0441988950276, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI4503529, Length=362, Percent_Identity=35.3591160220994, Blast_Score=221, Evalue=9e-58, Organism=Homo sapiens, GI83700235, Length=367, Percent_Identity=35.4223433242507, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI45446747, Length=420, Percent_Identity=32.8571428571429, Blast_Score=219, Evalue=3e-57, Organism=Homo sapiens, GI45446743, Length=420, Percent_Identity=32.8571428571429, Blast_Score=219, Evalue=3e-57, Organism=Homo sapiens, GI31542656, Length=369, Percent_Identity=36.5853658536585, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI13129006, Length=386, Percent_Identity=34.4559585492228, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI55749865, Length=362, Percent_Identity=35.6353591160221, Blast_Score=216, Evalue=3e-56, Organism=Homo sapiens, GI188035877, Length=363, Percent_Identity=32.7823691460055, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI224593278, Length=359, Percent_Identity=34.5403899721448, Blast_Score=209, Evalue=3e-54, Organism=Homo sapiens, GI21040371, Length=377, Percent_Identity=30.7692307692308, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI41327776, Length=415, Percent_Identity=31.566265060241, Blast_Score=205, Evalue=7e-53, Organism=Homo sapiens, GI4758112, Length=378, Percent_Identity=30.6878306878307, Blast_Score=205, Evalue=9e-53, Organism=Homo sapiens, GI18375623, Length=378, Percent_Identity=30.6878306878307, Blast_Score=205, Evalue=9e-53, Organism=Homo sapiens, GI21071032, Length=359, Percent_Identity=32.8690807799443, Blast_Score=202, Evalue=8e-52, Organism=Homo sapiens, GI262118318, Length=384, Percent_Identity=33.0729166666667, Blast_Score=201, Evalue=2e-51, Organism=Homo sapiens, GI262231852, Length=384, Percent_Identity=33.0729166666667, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI216548263, Length=384, Percent_Identity=33.0729166666667, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI13518015, Length=384, Percent_Identity=33.0729166666667, Blast_Score=199, Evalue=4e-51, Organism=Homo sapiens, GI6005743, Length=380, Percent_Identity=32.3684210526316, Blast_Score=195, Evalue=9e-50, Organism=Homo sapiens, GI8922886, Length=380, Percent_Identity=32.1052631578947, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI62241022, Length=362, Percent_Identity=33.1491712707182, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI164419743, Length=338, Percent_Identity=32.2485207100592, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI51094101, Length=338, Percent_Identity=32.2485207100592, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI256223453, Length=360, Percent_Identity=31.3888888888889, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI13514831, Length=374, Percent_Identity=31.0160427807487, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI62241024, Length=340, Percent_Identity=33.8235294117647, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI38569503, Length=368, Percent_Identity=30.4347826086957, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI38569505, Length=368, Percent_Identity=30.4347826086957, Blast_Score=178, Evalue=8e-45, Organism=Homo sapiens, GI164419732, Length=366, Percent_Identity=30.0546448087432, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI17505907, Length=399, Percent_Identity=29.5739348370927, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI41327779, Length=377, Percent_Identity=31.5649867374005, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI9506931, Length=399, Percent_Identity=27.8195488721804, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI154759257, Length=413, Percent_Identity=32.2033898305085, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI38327634, Length=372, Percent_Identity=30.6451612903226, Blast_Score=159, Evalue=8e-39, Organism=Homo sapiens, GI256773275, Length=386, Percent_Identity=29.0155440414508, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI4826686, Length=345, Percent_Identity=30.4347826086957, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI9966805, Length=309, Percent_Identity=32.0388349514563, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI20336298, Length=338, Percent_Identity=28.698224852071, Blast_Score=119, Evalue=8e-27, Organism=Escherichia coli, GI87082221, Length=368, Percent_Identity=42.3913043478261, Blast_Score=295, Evalue=3e-81, Organism=Escherichia coli, GI1787605, Length=456, Percent_Identity=34.8684210526316, Blast_Score=287, Evalue=1e-78, Organism=Escherichia coli, GI1787016, Length=372, Percent_Identity=36.5591397849462, Blast_Score=255, Evalue=4e-69, Organism=Escherichia coli, GI1790214, Length=376, Percent_Identity=33.2446808510638, Blast_Score=229, Evalue=3e-61, Organism=Escherichia coli, GI1788930, Length=386, Percent_Identity=32.6424870466321, Blast_Score=183, Evalue=2e-47, Organism=Escherichia coli, GI48994977, Length=334, Percent_Identity=26.0479041916168, Blast_Score=75, Evalue=8e-15, Organism=Caenorhabditis elegans, GI71987143, Length=363, Percent_Identity=35.5371900826446, Blast_Score=260, Evalue=1e-69, Organism=Caenorhabditis elegans, GI71995724, Length=366, Percent_Identity=36.6120218579235, Blast_Score=256, Evalue=2e-68, Organism=Caenorhabditis elegans, GI17507121, Length=366, Percent_Identity=36.3387978142077, Blast_Score=256, Evalue=3e-68, Organism=Caenorhabditis elegans, GI17555296, Length=369, Percent_Identity=36.0433604336043, Blast_Score=237, Evalue=1e-62, Organism=Caenorhabditis elegans, GI86570094, Length=350, Percent_Identity=36.5714285714286, Blast_Score=225, Evalue=4e-59, Organism=Caenorhabditis elegans, GI32565321, Length=406, Percent_Identity=35.2216748768473, Blast_Score=224, Evalue=6e-59, Organism=Caenorhabditis elegans, GI17552114, Length=354, Percent_Identity=31.9209039548023, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17510307, Length=353, Percent_Identity=38.8101983002833, Blast_Score=217, Evalue=1e-56, Organism=Caenorhabditis elegans, GI71995514, Length=373, Percent_Identity=36.9973190348526, Blast_Score=217, Evalue=1e-56, Organism=Caenorhabditis elegans, GI17510309, Length=373, Percent_Identity=36.9973190348526, Blast_Score=217, Evalue=1e-56, Organism=Caenorhabditis elegans, GI115533224, Length=334, Percent_Identity=37.125748502994, Blast_Score=212, Evalue=3e-55, Organism=Caenorhabditis elegans, GI71995718, Length=365, Percent_Identity=33.972602739726, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI71982858, Length=377, Percent_Identity=29.973474801061, Blast_Score=205, Evalue=5e-53, Organism=Caenorhabditis elegans, GI115532546, Length=375, Percent_Identity=31.4666666666667, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI115532548, Length=375, Percent_Identity=31.2, Blast_Score=201, Evalue=8e-52, Organism=Caenorhabditis elegans, GI17507945, Length=340, Percent_Identity=34.1176470588235, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17537549, Length=365, Percent_Identity=33.4246575342466, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI17552642, Length=361, Percent_Identity=32.9639889196676, Blast_Score=194, Evalue=6e-50, Organism=Caenorhabditis elegans, GI17509811, Length=367, Percent_Identity=30.5177111716621, Blast_Score=189, Evalue=2e-48, Organism=Caenorhabditis elegans, GI17510559, Length=386, Percent_Identity=30.0518134715026, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17536099, Length=401, Percent_Identity=30.4239401496259, Blast_Score=177, Evalue=9e-45, Organism=Caenorhabditis elegans, GI17536101, Length=401, Percent_Identity=30.4239401496259, Blast_Score=177, Evalue=1e-44, Organism=Caenorhabditis elegans, GI71999646, Length=343, Percent_Identity=29.7376093294461, Blast_Score=177, Evalue=1e-44, Organism=Caenorhabditis elegans, GI71999644, Length=343, Percent_Identity=29.7376093294461, Blast_Score=176, Evalue=3e-44, Organism=Caenorhabditis elegans, GI17507881, Length=371, Percent_Identity=31.266846361186, Blast_Score=175, Evalue=4e-44, Organism=Caenorhabditis elegans, GI17507877, Length=371, Percent_Identity=30.9973045822102, Blast_Score=174, Evalue=7e-44, Organism=Caenorhabditis elegans, GI17507879, Length=371, Percent_Identity=31.266846361186, Blast_Score=174, Evalue=8e-44, Organism=Caenorhabditis elegans, GI17536103, Length=401, Percent_Identity=30.4239401496259, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI193206561, Length=339, Percent_Identity=30.3834808259587, Blast_Score=171, Evalue=8e-43, Organism=Caenorhabditis elegans, GI17553716, Length=351, Percent_Identity=28.7749287749288, Blast_Score=171, Evalue=8e-43, Organism=Caenorhabditis elegans, GI17505370, Length=352, Percent_Identity=29.8295454545455, Blast_Score=164, Evalue=8e-41, Organism=Caenorhabditis elegans, GI17508543, Length=388, Percent_Identity=28.0927835051546, Blast_Score=158, Evalue=5e-39, Organism=Caenorhabditis elegans, GI71990816, Length=367, Percent_Identity=30.7901907356948, Blast_Score=149, Evalue=4e-36, Organism=Caenorhabditis elegans, GI193208216, Length=381, Percent_Identity=29.1338582677165, Blast_Score=148, Evalue=6e-36, Organism=Caenorhabditis elegans, GI17507641, Length=392, Percent_Identity=29.3367346938776, Blast_Score=147, Evalue=9e-36, Organism=Caenorhabditis elegans, GI17556951, Length=456, Percent_Identity=26.0964912280702, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI32564046, Length=375, Percent_Identity=28.8, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI25148291, Length=337, Percent_Identity=29.080118694362, Blast_Score=135, Evalue=4e-32, Organism=Caenorhabditis elegans, GI25148203, Length=411, Percent_Identity=25.5474452554745, Blast_Score=131, Evalue=6e-31, Organism=Caenorhabditis elegans, GI71982862, Length=198, Percent_Identity=33.8383838383838, Blast_Score=129, Evalue=2e-30, Organism=Caenorhabditis elegans, GI71997889, Length=371, Percent_Identity=27.7628032345013, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17566630, Length=333, Percent_Identity=26.7267267267267, Blast_Score=102, Evalue=6e-22, Organism=Caenorhabditis elegans, GI17557982, Length=374, Percent_Identity=25.9358288770053, Blast_Score=101, Evalue=9e-22, Organism=Caenorhabditis elegans, GI71987152, Length=99, Percent_Identity=45.4545454545455, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI25145561, Length=376, Percent_Identity=23.6702127659574, Blast_Score=75, Evalue=8e-14, Organism=Caenorhabditis elegans, GI71987993, Length=362, Percent_Identity=24.0331491712707, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71987997, Length=362, Percent_Identity=24.0331491712707, Blast_Score=67, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6321856, Length=369, Percent_Identity=36.8563685636856, Blast_Score=255, Evalue=1e-68, Organism=Saccharomyces cerevisiae, GI6320224, Length=367, Percent_Identity=35.9673024523161, Blast_Score=250, Evalue=3e-67, Organism=Saccharomyces cerevisiae, GI6324217, Length=357, Percent_Identity=39.4957983193277, Blast_Score=244, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6321360, Length=347, Percent_Identity=39.193083573487, Blast_Score=231, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6320041, Length=365, Percent_Identity=33.972602739726, Blast_Score=224, Evalue=3e-59, Organism=Saccharomyces cerevisiae, GI6322912, Length=360, Percent_Identity=35.8333333333333, Blast_Score=217, Evalue=4e-57, Organism=Saccharomyces cerevisiae, GI6322323, Length=360, Percent_Identity=35.8333333333333, Blast_Score=217, Evalue=4e-57, Organism=Saccharomyces cerevisiae, GI6325138, Length=371, Percent_Identity=34.5013477088949, Blast_Score=215, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6323021, Length=353, Percent_Identity=35.4107648725212, Blast_Score=214, Evalue=3e-56, Organism=Saccharomyces cerevisiae, GI6324778, Length=373, Percent_Identity=32.7077747989276, Blast_Score=212, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6320119, Length=380, Percent_Identity=31.5789473684211, Blast_Score=206, Evalue=6e-54, Organism=Saccharomyces cerevisiae, GI6321963, Length=382, Percent_Identity=34.8167539267016, Blast_Score=205, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6324620, Length=381, Percent_Identity=29.3963254593176, Blast_Score=200, Evalue=4e-52, Organism=Saccharomyces cerevisiae, GI6322427, Length=363, Percent_Identity=31.9559228650138, Blast_Score=179, Evalue=6e-46, Organism=Saccharomyces cerevisiae, GI6321111, Length=370, Percent_Identity=31.6216216216216, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6320449, Length=377, Percent_Identity=29.973474801061, Blast_Score=168, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6320173, Length=429, Percent_Identity=27.039627039627, Blast_Score=167, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6319714, Length=366, Percent_Identity=30.327868852459, Blast_Score=167, Evalue=4e-42, Organism=Saccharomyces cerevisiae, GI6323947, Length=358, Percent_Identity=31.2849162011173, Blast_Score=162, Evalue=8e-41, Organism=Saccharomyces cerevisiae, GI6319618, Length=414, Percent_Identity=29.7101449275362, Blast_Score=162, Evalue=9e-41, Organism=Saccharomyces cerevisiae, GI6321267, Length=347, Percent_Identity=34.0057636887608, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6320400, Length=380, Percent_Identity=28.9473684210526, Blast_Score=139, Evalue=7e-34, Organism=Saccharomyces cerevisiae, GI6323306, Length=419, Percent_Identity=27.2076372315036, Blast_Score=131, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6324366, Length=350, Percent_Identity=25.7142857142857, Blast_Score=128, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6322876, Length=469, Percent_Identity=24.0938166311301, Blast_Score=124, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6321374, Length=387, Percent_Identity=26.0981912144703, Blast_Score=106, Evalue=1e-23, Organism=Drosophila melanogaster, GI28574962, Length=358, Percent_Identity=40.5027932960894, Blast_Score=249, Evalue=2e-66, Organism=Drosophila melanogaster, GI24645031, Length=366, Percent_Identity=36.0655737704918, Blast_Score=248, Evalue=7e-66, Organism=Drosophila melanogaster, GI24585582, Length=416, Percent_Identity=34.6153846153846, Blast_Score=247, Evalue=1e-65, Organism=Drosophila melanogaster, GI24642151, Length=356, Percent_Identity=37.0786516853933, Blast_Score=236, Evalue=3e-62, Organism=Drosophila melanogaster, GI24582080, Length=356, Percent_Identity=35.9550561797753, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI24582078, Length=356, Percent_Identity=35.9550561797753, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI17136248, Length=356, Percent_Identity=35.9550561797753, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI24582075, Length=356, Percent_Identity=35.9550561797753, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI24584399, Length=360, Percent_Identity=35, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24644487, Length=365, Percent_Identity=35.0684931506849, Blast_Score=225, Evalue=4e-59, Organism=Drosophila melanogaster, GI45551833, Length=365, Percent_Identity=35.0684931506849, Blast_Score=225, Evalue=4e-59, Organism=Drosophila melanogaster, GI24644485, Length=365, Percent_Identity=35.0684931506849, Blast_Score=225, Evalue=4e-59, Organism=Drosophila melanogaster, GI24644483, Length=365, Percent_Identity=35.0684931506849, Blast_Score=225, Evalue=4e-59, Organism=Drosophila melanogaster, GI281361218, Length=365, Percent_Identity=35.0684931506849, Blast_Score=225, Evalue=4e-59, Organism=Drosophila melanogaster, GI24644481, Length=365, Percent_Identity=35.0684931506849, Blast_Score=225, Evalue=4e-59, Organism=Drosophila melanogaster, GI24584994, Length=394, Percent_Identity=35.7868020304569, Blast_Score=225, Evalue=6e-59, Organism=Drosophila melanogaster, GI24644479, Length=365, Percent_Identity=35.0684931506849, Blast_Score=225, Evalue=7e-59, Organism=Drosophila melanogaster, GI17985987, Length=379, Percent_Identity=34.3007915567282, Blast_Score=222, Evalue=4e-58, Organism=Drosophila melanogaster, GI21355075, Length=359, Percent_Identity=36.2116991643454, Blast_Score=222, Evalue=6e-58, Organism=Drosophila melanogaster, GI21356161, Length=360, Percent_Identity=35, Blast_Score=218, Evalue=7e-57, Organism=Drosophila melanogaster, GI18857967, Length=376, Percent_Identity=34.0425531914894, Blast_Score=212, Evalue=4e-55, Organism=Drosophila melanogaster, GI24583279, Length=362, Percent_Identity=30.6629834254144, Blast_Score=211, Evalue=8e-55, Organism=Drosophila melanogaster, GI24583281, Length=362, Percent_Identity=30.6629834254144, Blast_Score=211, Evalue=9e-55, Organism=Drosophila melanogaster, GI17977678, Length=365, Percent_Identity=33.6986301369863, Blast_Score=210, Evalue=1e-54, Organism=Drosophila melanogaster, GI24662330, Length=359, Percent_Identity=33.983286908078, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI24581954, Length=379, Percent_Identity=31.1345646437995, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI24581952, Length=379, Percent_Identity=31.1345646437995, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI24581956, Length=379, Percent_Identity=31.1345646437995, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI281365720, Length=317, Percent_Identity=37.5394321766561, Blast_Score=196, Evalue=3e-50, Organism=Drosophila melanogaster, GI17136814, Length=354, Percent_Identity=34.180790960452, Blast_Score=189, Evalue=5e-48, Organism=Drosophila melanogaster, GI17647335, Length=356, Percent_Identity=29.7752808988764, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI28575014, Length=347, Percent_Identity=32.2766570605187, Blast_Score=185, Evalue=5e-47, Organism=Drosophila melanogaster, GI24666101, Length=353, Percent_Identity=31.728045325779, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI24642822, Length=389, Percent_Identity=28.0205655526992, Blast_Score=165, Evalue=6e-41, Organism=Drosophila melanogaster, GI28571808, Length=349, Percent_Identity=32.0916905444126, Blast_Score=162, Evalue=6e-40, Organism=Drosophila melanogaster, GI28571809, Length=349, Percent_Identity=32.0916905444126, Blast_Score=162, Evalue=6e-40, Organism=Drosophila melanogaster, GI18859659, Length=484, Percent_Identity=27.0661157024793, Blast_Score=159, Evalue=3e-39, Organism=Drosophila melanogaster, GI28571338, Length=484, Percent_Identity=27.0661157024793, Blast_Score=159, Evalue=4e-39, Organism=Drosophila melanogaster, GI24643725, Length=391, Percent_Identity=27.1099744245524, Blast_Score=152, Evalue=6e-37, Organism=Drosophila melanogaster, GI20130173, Length=330, Percent_Identity=33.3333333333333, Blast_Score=148, Evalue=8e-36, Organism=Drosophila melanogaster, GI21355559, Length=388, Percent_Identity=29.3814432989691, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI24668515, Length=340, Percent_Identity=29.7058823529412, Blast_Score=142, Evalue=4e-34, Organism=Drosophila melanogaster, GI17136666, Length=425, Percent_Identity=28.9411764705882, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI19920478, Length=337, Percent_Identity=24.3323442136499, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI24640164, Length=358, Percent_Identity=22.9050279329609, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI62472181, Length=344, Percent_Identity=22.9651162790698, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24664230, Length=344, Percent_Identity=22.9651162790698, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24646066, Length=345, Percent_Identity=24.3478260869565, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI24664226, Length=344, Percent_Identity=22.9651162790698, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 54076; Mature: 54076
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKQQFTDYRLSDEITRALGIMKYESPTEVQQQVIPRALEREDLVVKAQTGSGKTAAFGI CCCCCCCCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECC PVIELIDWAENKPQVLVLTPTRELAVQVREDMTNIGRFKRIKATAVYGKEPFSKQREELK CHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHH QKTHIVVGTPGRVMDHIERETLSLDRIEYLIIDEADEMLNRGFLADVEKILQQLPKDRVT HHCEEEEECCHHHHHHHHHHHCCCCCEEEEEEECHHHHHHCCCHHHHHHHHHHCCCCCEE MVFSATFPQDIERLCQKHMNAPARVAIESTGMTASTIEHRLLPVHRNEKLAVLQDITVVE EEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHEEEECCCCCEEEEEEEEEEE NPDSCMIFCRTKENVDTVYAELDKAGYSAERLHGGLEQEDRFAVMNGFKMGNFRYLVATD CCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEECCEEECCEEEEEEEC VAARGIDVDNVELVINYDVPVEKESYVHRTGRTGRAGKQGTAITLMTRQEERLIGAIESY HHHCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHH VQFEIPMIDAPTEAEVAANQDAFEQKLSGRRVVRNNKTARINQDIMKLHFSGGKKKKLRA HEEEEEEECCCCCCHHHCCHHHHHHHHCCCEEECCCCCCEECHHHHEEECCCCCCCEEEH VDFVGTIAKIPGVSADDIGIITINDQMTYVDILNGKGSIVLQAMETTPVKGKKLKVSKAR HHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEECCCCCEEEEEECCCCCCCCEEECCCCC K C >Mature Secondary Structure MNKQQFTDYRLSDEITRALGIMKYESPTEVQQQVIPRALEREDLVVKAQTGSGKTAAFGI CCCCCCCCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECC PVIELIDWAENKPQVLVLTPTRELAVQVREDMTNIGRFKRIKATAVYGKEPFSKQREELK CHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHH QKTHIVVGTPGRVMDHIERETLSLDRIEYLIIDEADEMLNRGFLADVEKILQQLPKDRVT HHCEEEEECCHHHHHHHHHHHCCCCCEEEEEEECHHHHHHCCCHHHHHHHHHHCCCCCEE MVFSATFPQDIERLCQKHMNAPARVAIESTGMTASTIEHRLLPVHRNEKLAVLQDITVVE EEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHEEEECCCCCEEEEEEEEEEE NPDSCMIFCRTKENVDTVYAELDKAGYSAERLHGGLEQEDRFAVMNGFKMGNFRYLVATD CCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEECCEEECCEEEEEEEC VAARGIDVDNVELVINYDVPVEKESYVHRTGRTGRAGKQGTAITLMTRQEERLIGAIESY HHHCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHH VQFEIPMIDAPTEAEVAANQDAFEQKLSGRRVVRNNKTARINQDIMKLHFSGGKKKKLRA HEEEEEEECCCCCCHHHCCHHHHHHHHCCCEEECCCCCCEECHHHHEEECCCCCCCEEEH VDFVGTIAKIPGVSADDIGIITINDQMTYVDILNGKGSIVLQAMETTPVKGKKLKVSKAR HHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEECCCCCEEEEEECCCCCCCCEEECCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377; 10481020 [H]