Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is 229917479

Identifier: 229917479

GI number: 229917479

Start: 1722701

End: 1724083

Strand: Direct

Name: 229917479

Synonym: EAT1b_1754

Alternate gene names: NA

Gene position: 1722701-1724083 (Clockwise)

Preceding gene: 229917478

Following gene: 229917480

Centisome position: 57.43

GC content: 51.27

Gene sequence:

>1383_bases
ATGAAACGGTTTACGATTGCAAAGCCGGAACTGTGGAAGTCGTTCATTTTGCTCACGTTAATCGTCACGTCGATTGTTCA
AACCATCATCTTATGGGACTACCATCCCACGTATCAGGCCGTCCAATCAGAAACGCAACTCACGACGGTGGACGAGTCAT
TGCAACGTCGTGCGAATCAGGTCATCATCCCGACTCAAGCGGTCGTGCATGACAACAATGCCGTGTTCGCTTCGAAGAAT
ACACCGAAGCAACTGATGCGTGTCATTCGAGATTCGTTTGAGGCGAGTGAGTTCAAGCCGCTCGCCGTAAAAAACGTCCC
GAGTTTCTATACGGATATCAACGAGGGACTCGAGTTGATCTTGCCGGAGGCCTACTATGCGGACACGCTCAGCTATATGC
TTCCGGGAACGTATAGTCTGTCCGGGAAGATTCCACAGCGGATCCTCATCTATATGGACGACAGTGTGTTCAACATCCGC
GCCATCATGAGCGACCAGTCCATTTGGGAAGGGAAGTTGACGAAAGTCGGAAACGGCGATGTGAACAGCCTTTTCTTAAA
AAACTCGAGTCGAACGATGAAACGCGTGACGTATACGGATGAACGCGTGAATTACATCCCGGTCGTCGGACCTGAGATGA
ATGAGTTGTTCGCGTATGACGTATCGTCGATTCAAATCGACACTCGTCTCGACTGGATGCGAGATACGTTCTTCCCAGGT
GACCCGAACGTTCAAGAAGTCGACCCGGCAAGCTCGGTCGGGGCGTTGACGAACGGTGTCAGTGTGGCGGAATATGATGC
GAAACTGAACGCCAGTCGCTATCGAAACCTGTCTCGGAATAGCACCGAGCGTGATACAGCAATCGGATTGGATTCTATTG
TGGAATTCGTGAACTTCCACGGGGGATGGGTCGATGAAGCGTCTGAGAATCAAGGGCTGTCCCTTCGATTCGATGCCATC
ACACCGGCCAACAAAGGATTTGAAACGACCGTGTTCCGTTTTCACGTGAAAGGGTATCCGGTCTTCAGTCAGCGTGAGGC
GTTTATCAACAACGATGCCATCGACTTATCCACATTGCGTGTGGAAAACGACGGGGCACAGGTCCGGTCAATCACCCGTA
ACCACTTGGAAATCGATCGGTTGATCACCGTTGGCACGACACAGTTGGCCGATGCGGACGAGGTACTCGGTACGCTCATC
AACTCCGGACGATTTGAGAACGTGACCGAGATTCGAATCGGTTATGAGATTGAATATAACGAGGACACGAGCCGCTATGT
GACGTTTTCACCGAACTGGTTCGTGCGTGAGGCGGGCCGTTGGGTCCCATACAATCAAGGAGACGATTGGACAGAAAGGA
TGATGTATCGTGGATTGGAGTAA

Upstream 100 bases:

>100_bases
CCGCTCACGGTGGCGACATCTGGGCAGAGAGTGAATTTGGAAGAGGTACAACGATTTACTTCACGATCCCATTCGATACG
ATTGTGGAGGTGAATGATTG

Downstream 100 bases:

>100_bases
AGCGAAAACGATTTTAATCTTCGCCTTCCTCGCCTTGAACATCTATCTGTTGTTTCAATTGCTGACGGAAACATGGGCGA
CCGAAGTCGTGACGAATGAC

Product: YycH family protein

Products: NA

Alternate protein names: YycH Protein

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MKRFTIAKPELWKSFILLTLIVTSIVQTIILWDYHPTYQAVQSETQLTTVDESLQRRANQVIIPTQAVVHDNNAVFASKN
TPKQLMRVIRDSFEASEFKPLAVKNVPSFYTDINEGLELILPEAYYADTLSYMLPGTYSLSGKIPQRILIYMDDSVFNIR
AIMSDQSIWEGKLTKVGNGDVNSLFLKNSSRTMKRVTYTDERVNYIPVVGPEMNELFAYDVSSIQIDTRLDWMRDTFFPG
DPNVQEVDPASSVGALTNGVSVAEYDAKLNASRYRNLSRNSTERDTAIGLDSIVEFVNFHGGWVDEASENQGLSLRFDAI
TPANKGFETTVFRFHVKGYPVFSQREAFINNDAIDLSTLRVENDGAQVRSITRNHLEIDRLITVGTTQLADADEVLGTLI
NSGRFENVTEIRIGYEIEYNEDTSRYVTFSPNWFVREAGRWVPYNQGDDWTERMMYRGLE

Sequences:

>Translated_460_residues
MKRFTIAKPELWKSFILLTLIVTSIVQTIILWDYHPTYQAVQSETQLTTVDESLQRRANQVIIPTQAVVHDNNAVFASKN
TPKQLMRVIRDSFEASEFKPLAVKNVPSFYTDINEGLELILPEAYYADTLSYMLPGTYSLSGKIPQRILIYMDDSVFNIR
AIMSDQSIWEGKLTKVGNGDVNSLFLKNSSRTMKRVTYTDERVNYIPVVGPEMNELFAYDVSSIQIDTRLDWMRDTFFPG
DPNVQEVDPASSVGALTNGVSVAEYDAKLNASRYRNLSRNSTERDTAIGLDSIVEFVNFHGGWVDEASENQGLSLRFDAI
TPANKGFETTVFRFHVKGYPVFSQREAFINNDAIDLSTLRVENDGAQVRSITRNHLEIDRLITVGTTQLADADEVLGTLI
NSGRFENVTEIRIGYEIEYNEDTSRYVTFSPNWFVREAGRWVPYNQGDDWTERMMYRGLE
>Mature_460_residues
MKRFTIAKPELWKSFILLTLIVTSIVQTIILWDYHPTYQAVQSETQLTTVDESLQRRANQVIIPTQAVVHDNNAVFASKN
TPKQLMRVIRDSFEASEFKPLAVKNVPSFYTDINEGLELILPEAYYADTLSYMLPGTYSLSGKIPQRILIYMDDSVFNIR
AIMSDQSIWEGKLTKVGNGDVNSLFLKNSSRTMKRVTYTDERVNYIPVVGPEMNELFAYDVSSIQIDTRLDWMRDTFFPG
DPNVQEVDPASSVGALTNGVSVAEYDAKLNASRYRNLSRNSTERDTAIGLDSIVEFVNFHGGWVDEASENQGLSLRFDAI
TPANKGFETTVFRFHVKGYPVFSQREAFINNDAIDLSTLRVENDGAQVRSITRNHLEIDRLITVGTTQLADADEVLGTLI
NSGRFENVTEIRIGYEIEYNEDTSRYVTFSPNWFVREAGRWVPYNQGDDWTERMMYRGLE

Specific function: Unknown

COG id: COG4863

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52394; Mature: 52394

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFTIAKPELWKSFILLTLIVTSIVQTIILWDYHPTYQAVQSETQLTTVDESLQRRANQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHCCCCEEHHHHHHHHHCCE
VIIPTQAVVHDNNAVFASKNTPKQLMRVIRDSFEASEFKPLAVKNVPSFYTDINEGLELI
EEECCEEEEECCCEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHCCCEEE
LPEAYYADTLSYMLPGTYSLSGKIPQRILIYMDDSVFNIRAIMSDQSIWEGKLTKVGNGD
ECCHHHHHHHHHHCCCCEEECCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCEECCCCC
VNSLFLKNSSRTMKRVTYTDERVNYIPVVGPEMNELFAYDVSSIQIDTRLDWMRDTFFPG
CEEEEEECCCCCEEEEEECCCCCEEEEEECCCHHHHEEECCCEEEEECHHHHHHHCCCCC
DPNVQEVDPASSVGALTNGVSVAEYDAKLNASRYRNLSRNSTERDTAIGLDSIVEFVNFH
CCCCCCCCCCHHHHHHHCCCEEEECCCCCCHHHHHCCCCCCCCCHHHCCHHHHHHHHHCC
GGWVDEASENQGLSLRFDAITPANKGFETTVFRFHVKGYPVFSQREAFINNDAIDLSTLR
CCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCHHHCCCCCEEEEEEE
VENDGAQVRSITRNHLEIDRLITVGTTQLADADEVLGTLINSGRFENVTEIRIGYEIEYN
EECCCHHHHHHHHHHEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEEC
EDTSRYVTFSPNWFVREAGRWVPYNQGDDWTERMMYRGLE
CCCCEEEEECCCEEEECCCCCCCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure
MKRFTIAKPELWKSFILLTLIVTSIVQTIILWDYHPTYQAVQSETQLTTVDESLQRRANQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHCCCCEEHHHHHHHHHCCE
VIIPTQAVVHDNNAVFASKNTPKQLMRVIRDSFEASEFKPLAVKNVPSFYTDINEGLELI
EEECCEEEEECCCEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHCCCEEE
LPEAYYADTLSYMLPGTYSLSGKIPQRILIYMDDSVFNIRAIMSDQSIWEGKLTKVGNGD
ECCHHHHHHHHHHCCCCEEECCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCEECCCCC
VNSLFLKNSSRTMKRVTYTDERVNYIPVVGPEMNELFAYDVSSIQIDTRLDWMRDTFFPG
CEEEEEECCCCCEEEEEECCCCCEEEEEECCCHHHHEEECCCEEEEECHHHHHHHCCCCC
DPNVQEVDPASSVGALTNGVSVAEYDAKLNASRYRNLSRNSTERDTAIGLDSIVEFVNFH
CCCCCCCCCCHHHHHHHCCCEEEECCCCCCHHHHHCCCCCCCCCHHHCCHHHHHHHHHCC
GGWVDEASENQGLSLRFDAITPANKGFETTVFRFHVKGYPVFSQREAFINNDAIDLSTLR
CCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCHHHCCCCCEEEEEEE
VENDGAQVRSITRNHLEIDRLITVGTTQLADADEVLGTLINSGRFENVTEIRIGYEIEYN
EECCCHHHHHHHHHHEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEEC
EDTSRYVTFSPNWFVREAGRWVPYNQGDDWTERMMYRGLE
CCCCEEEEECCCEEEECCCCCCCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA