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The map label for this gene is ssb [H]

Identifier: 229917471

GI number: 229917471

Start: 1713840

End: 1714349

Strand: Direct

Name: ssb [H]

Synonym: EAT1b_1746

Alternate gene names: 229917471

Gene position: 1713840-1714349 (Clockwise)

Preceding gene: 229917470

Following gene: 229917472

Centisome position: 57.13

GC content: 51.96

Gene sequence:

>510_bases
ATGATTAACCGAGTTGTGTTAGTTGGTCGATTGACTCGCGATCCCGAAATGCGTTATACGCAGAGCGGAATCGCCGTAAC
ACGCCTTACTCTCGCTTGCGATCGTCCATTCGCTGGACAAGATGGGAAGCGCGAGACGGACTTTATTGATTGTGTCGTTT
GGCGCAAACAAGCAGAGAACGTAGCACAATACTTGAAAAAGGGCAGCATGGCCGGCGTTGACGGTCGCCTTCAAATCAGT
AGTTACGAAGGACAAGATGGCCAACGTCGTTACCGGGCAGAAGTAGTCGCCGACAGCGTACGCTTCCTTGAACCACGCGG
AGCCTCAGGGCAACGTGAGCAAGCACCATCAGGAGATGTCTTCGGTGGTGGTGAATCAAGTGGATCAGGATGGGGCGCAG
GAGCTGCTTCGACTTCATCTCAGTCCTCGAATTCGAATAAAGGTTTTGACGCAGATCCGTTCTCGGGTGGCGGCAAAATC
GACTTGTCAGATGATGATTTGCCATTCTAA

Upstream 100 bases:

>100_bases
GAGCGTCTCATGAAGATCTCTGACGACGTTGTCCGTCAAATGACAACAAAAGACGAGCGTTAATCCTTAACGTTTCGTAT
CGTGAAAGGGGAGCTTGGAG

Downstream 100 bases:

>100_bases
TCATCATGGACAATAAAAACTAACTTATAAAGGAGGTCTTCACATGGCACGTCGTCCAGGAGGTCGTCGTCGTCGTAAAG
TATGTTTCTTTACGTCGAAC

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MINRVVLVGRLTRDPEMRYTQSGIAVTRLTLACDRPFAGQDGKRETDFIDCVVWRKQAENVAQYLKKGSMAGVDGRLQIS
SYEGQDGQRRYRAEVVADSVRFLEPRGASGQREQAPSGDVFGGGESSGSGWGAGAASTSSQSSNSNKGFDADPFSGGGKI
DLSDDDLPF

Sequences:

>Translated_169_residues
MINRVVLVGRLTRDPEMRYTQSGIAVTRLTLACDRPFAGQDGKRETDFIDCVVWRKQAENVAQYLKKGSMAGVDGRLQIS
SYEGQDGQRRYRAEVVADSVRFLEPRGASGQREQAPSGDVFGGGESSGSGWGAGAASTSSQSSNSNKGFDADPFSGGGKI
DLSDDDLPF
>Mature_169_residues
MINRVVLVGRLTRDPEMRYTQSGIAVTRLTLACDRPFAGQDGKRETDFIDCVVWRKQAENVAQYLKKGSMAGVDGRLQIS
SYEGQDGQRRYRAEVVADSVRFLEPRGASGQREQAPSGDVFGGGESSGSGWGAGAASTSSQSSNSNKGFDADPFSGGGKI
DLSDDDLPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=100, Percent_Identity=39, Blast_Score=74, Evalue=4e-15,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 18120; Mature: 18120

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINRVVLVGRLTRDPEMRYTQSGIAVTRLTLACDRPFAGQDGKRETDFIDCVVWRKQAEN
CCCEEEEEEECCCCCCCEEECCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
VAQYLKKGSMAGVDGRLQISSYEGQDGQRRYRAEVVADSVRFLEPRGASGQREQAPSGDV
HHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
FGGGESSGSGWGAGAASTSSQSSNSNKGFDADPFSGGGKIDLSDDDLPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
>Mature Secondary Structure
MINRVVLVGRLTRDPEMRYTQSGIAVTRLTLACDRPFAGQDGKRETDFIDCVVWRKQAEN
CCCEEEEEEECCCCCCCEEECCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
VAQYLKKGSMAGVDGRLQISSYEGQDGQRRYRAEVVADSVRFLEPRGASGQREQAPSGDV
HHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
FGGGESSGSGWGAGAASTSSQSSNSNKGFDADPFSGGGKIDLSDDDLPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]