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The map label for this gene is recR

Identifier: 229917434

GI number: 229917434

Start: 1668122

End: 1668721

Strand: Reverse

Name: recR

Synonym: EAT1b_1709

Alternate gene names: 229917434

Gene position: 1668721-1668122 (Counterclockwise)

Preceding gene: 229917435

Following gene: 229917433

Centisome position: 55.63

GC content: 46.0

Gene sequence:

>600_bases
TTGCAATACCCTGAAGCCATTGGACGATTGATTGAGAGTTTTACGAAGTTACCTGGGATTGGACCGAAAACTGCGGTACG
CTTAGCATTCCATGTATTAGATATGGAAGAAGATGATGTGTTGACGTTCGCGAAATCTCTCGTGAGTGCGAAACGTGACA
TAAAGTATTGTACCGTATGTGGTCACATCACGGATATTGACCCGTGTGCAATCTGCAAAGACTCACATCGGGATGAAACG
GTAGTTTGTGTGGTTCAAGACTCAAGAGACGTGATTGCTATGGAGAAGATGCGGGAGTACAGAGGGAAGTATCATGTTCT
TCATGGAGCCATTAGTCCAATGGAAGGGATTGGTCCAGAGGATATTAATGTTTCAAGTTTGCTGACACGTTTACAAGAGA
ACGAGTCGATTCAAGAAGTGATTTTAGCGACCAACCCGAACATTGAAGGGGAAGCGACTTCGATGTATTTATCGAGACTA
CTCAAACCGACAGGCATTCGCGTGACGCGTCTCGCCCATGGTCTACCAGTCGGTGGAGATTTGGAGTATGCGGATGAAGT
GACACTATCTCGGGCGATGGAAGGTAGAAGAGAGCTATGA

Upstream 100 bases:

>100_bases
GCAATGAAACAAGCGGATCAGCTTGTGAATGATAAGATGGGACGTTTCACACAAGGGATGAACCTCCCAGGCTTTTAAGT
GAAGAAAGGATCGATGCGAG

Downstream 100 bases:

>100_bases
AATGGTTTCGTAAGTCGTTAAGAGATGATTATGATCAACGACTACTGACTGAGCTGCTAGAAGCTAAGGCTAAGTTTGAA
TCGAAACGTCGGATGCTTGA

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MQYPEAIGRLIESFTKLPGIGPKTAVRLAFHVLDMEEDDVLTFAKSLVSAKRDIKYCTVCGHITDIDPCAICKDSHRDET
VVCVVQDSRDVIAMEKMREYRGKYHVLHGAISPMEGIGPEDINVSSLLTRLQENESIQEVILATNPNIEGEATSMYLSRL
LKPTGIRVTRLAHGLPVGGDLEYADEVTLSRAMEGRREL

Sequences:

>Translated_199_residues
MQYPEAIGRLIESFTKLPGIGPKTAVRLAFHVLDMEEDDVLTFAKSLVSAKRDIKYCTVCGHITDIDPCAICKDSHRDET
VVCVVQDSRDVIAMEKMREYRGKYHVLHGAISPMEGIGPEDINVSSLLTRLQENESIQEVILATNPNIEGEATSMYLSRL
LKPTGIRVTRLAHGLPVGGDLEYADEVTLSRAMEGRREL
>Mature_199_residues
MQYPEAIGRLIESFTKLPGIGPKTAVRLAFHVLDMEEDDVLTFAKSLVSAKRDIKYCTVCGHITDIDPCAICKDSHRDET
VVCVVQDSRDVIAMEKMREYRGKYHVLHGAISPMEGIGPEDINVSSLLTRLQENESIQEVILATNPNIEGEATSMYLSRL
LKPTGIRVTRLAHGLPVGGDLEYADEVTLSRAMEGRREL

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=200, Percent_Identity=41.5, Blast_Score=166, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_EXISA (C4KZX2)

Other databases:

- EMBL:   CP001615
- RefSeq:   YP_002886080.1
- GeneID:   7870749
- GenomeReviews:   CP001615_GR
- KEGG:   eat:EAT1b_1709
- OMA:   HGAISPM
- ProtClustDB:   PRK00076
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 22114; Mature: 22114

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYPEAIGRLIESFTKLPGIGPKTAVRLAFHVLDMEEDDVLTFAKSLVSAKRDIKYCTVC
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEE
GHITDIDPCAICKDSHRDETVVCVVQDSRDVIAMEKMREYRGKYHVLHGAISPMEGIGPE
CCCCCCCHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCC
DINVSSLLTRLQENESIQEVILATNPNIEGEATSMYLSRLLKPTGIRVTRLAHGLPVGGD
CCCHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCC
LEYADEVTLSRAMEGRREL
CCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQYPEAIGRLIESFTKLPGIGPKTAVRLAFHVLDMEEDDVLTFAKSLVSAKRDIKYCTVC
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEE
GHITDIDPCAICKDSHRDETVVCVVQDSRDVIAMEKMREYRGKYHVLHGAISPMEGIGPE
CCCCCCCHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCC
DINVSSLLTRLQENESIQEVILATNPNIEGEATSMYLSRLLKPTGIRVTRLAHGLPVGGD
CCCHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCC
LEYADEVTLSRAMEGRREL
CCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA