Click here to switch to the map view.

The map label for this gene is yacL [H]

Identifier: 229917384

GI number: 229917384

Start: 1600978

End: 1602042

Strand: Reverse

Name: yacL [H]

Synonym: EAT1b_1659

Alternate gene names: 229917384

Gene position: 1602042-1600978 (Counterclockwise)

Preceding gene: 229917385

Following gene: 229917383

Centisome position: 53.4

GC content: 45.26

Gene sequence:

>1065_bases
GTGAAGATTGCTGTACGAATCGGATTTATTTTGATTGGACTCGTCGTGGGTTGGTTCGGAATCATCGAAGCGACGCTTTT
ATTAGCAGACCTTGGCATGAATGTGCCGGAGTGGTTAACGATTCCATACGTAGCAAGTTTGATTGGTGGACTTATCTTCT
TCATTCTTAGTTTATTCTTAACAGATGGTGTTGTTGCATTTATTCGTTTTGTCGAAGAACGGCTCGTCCGTTTACCGGTA
GGGGATATCTTATTCGGTTCGATCGGTCTCATCATCGGGCTCTTGATTGCCTTTTTGATTAGTGTATCGCTTGAAGTCAC
GAATATTTTCTTACTGAGTAAAATCGTCCCGATTTTTGTCACGGCCCTGTTTGGTTACTTTGGTTTCGCGGTCGGCTATC
GGAAGCGTAACGAATGGATCAAACTATTTGTGAAGAGCGAACGCGAAAAGCCTGCGGCTGAACCGGTCCAACGCTCTAAT
GATAAGATTTTAGACACGAGCGTCATCATCGATGGCCGAATCGCGGATATTGCGACGACTGGATTCGTGGAAGGAACATT
GATTGTGCCCCAGTTCGTCATCGGCGAACTGCAATACATCGCCGACTCCTCGGATACGTTGAAGCGGAATCGTGGACGTC
GTGGACTGGACATCTTGAAGGAACTACAAGAGAACAAGCGCATCCAGGTTGAAATCTATGATGGAGACTTCGAAGACGTA
CCGGAAGTCGACATCAAATTGATTAAACTAGCTGAACTGAAAAACGGGATTGTTGTTACGAATGACTACAACTTAAATAA
AGTGTGTGAGGTACGAAATGTACCGGTCTTGAACATCAATGATTTGGCGAACGCCGTCAAACAGATTGTCATTCCTGGTG
AAGAGATGGTCGTGACAGTTATTAAAGAAGGAAAAGAGCAGAATCAAGGGGTTGCTTATCTTGAGGATGGGACAATGGTT
GTCGTGGAGGGCGGACGTAAATTGATTTCGAAGACGCTTCCTGTCGTTGTGACGAGTGTCTTACAAACGTCTGCAGGCCG
TATGATTTTTGCCCGTCCAGAATAA

Upstream 100 bases:

>100_bases
CAGTTTTTAACGCTTTGTAACGAACGTGATTGAAAAAATCGTGTTACAATGAAAGTGTTATTTTTTGAAATTTTATTTCA
TATAGAAGGAGGTGGAATGA

Downstream 100 bases:

>100_bases
CGGATCAAAAAGAGACGCGAGAGCGCTCTCTTTTTTCACGAAGAGAGGTATTAACATGGTAGCTTATACAGTTGTCATCC
CGGCTGCCGGGAGAGGGAAG

Product: PilT protein domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MKIAVRIGFILIGLVVGWFGIIEATLLLADLGMNVPEWLTIPYVASLIGGLIFFILSLFLTDGVVAFIRFVEERLVRLPV
GDILFGSIGLIIGLLIAFLISVSLEVTNIFLLSKIVPIFVTALFGYFGFAVGYRKRNEWIKLFVKSEREKPAAEPVQRSN
DKILDTSVIIDGRIADIATTGFVEGTLIVPQFVIGELQYIADSSDTLKRNRGRRGLDILKELQENKRIQVEIYDGDFEDV
PEVDIKLIKLAELKNGIVVTNDYNLNKVCEVRNVPVLNINDLANAVKQIVIPGEEMVVTVIKEGKEQNQGVAYLEDGTMV
VVEGGRKLISKTLPVVVTSVLQTSAGRMIFARPE

Sequences:

>Translated_354_residues
MKIAVRIGFILIGLVVGWFGIIEATLLLADLGMNVPEWLTIPYVASLIGGLIFFILSLFLTDGVVAFIRFVEERLVRLPV
GDILFGSIGLIIGLLIAFLISVSLEVTNIFLLSKIVPIFVTALFGYFGFAVGYRKRNEWIKLFVKSEREKPAAEPVQRSN
DKILDTSVIIDGRIADIATTGFVEGTLIVPQFVIGELQYIADSSDTLKRNRGRRGLDILKELQENKRIQVEIYDGDFEDV
PEVDIKLIKLAELKNGIVVTNDYNLNKVCEVRNVPVLNINDLANAVKQIVIPGEEMVVTVIKEGKEQNQGVAYLEDGTMV
VVEGGRKLISKTLPVVVTSVLQTSAGRMIFARPE
>Mature_354_residues
MKIAVRIGFILIGLVVGWFGIIEATLLLADLGMNVPEWLTIPYVASLIGGLIFFILSLFLTDGVVAFIRFVEERLVRLPV
GDILFGSIGLIIGLLIAFLISVSLEVTNIFLLSKIVPIFVTALFGYFGFAVGYRKRNEWIKLFVKSEREKPAAEPVQRSN
DKILDTSVIIDGRIADIATTGFVEGTLIVPQFVIGELQYIADSSDTLKRNRGRRGLDILKELQENKRIQVEIYDGDFEDV
PEVDIKLIKLAELKNGIVVTNDYNLNKVCEVRNVPVLNINDLANAVKQIVIPGEEMVVTVIKEGKEQNQGVAYLEDGTMV
VVEGGRKLISKTLPVVVTSVLQTSAGRMIFARPE

Specific function: Unknown

COG id: COG4956

COG function: function code R; Integral membrane protein (PIN domain superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596
- InterPro:   IPR002792 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 39177; Mature: 39177

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAVRIGFILIGLVVGWFGIIEATLLLADLGMNVPEWLTIPYVASLIGGLIFFILSLFL
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TDGVVAFIRFVEERLVRLPVGDILFGSIGLIIGLLIAFLISVSLEVTNIFLLSKIVPIFV
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TALFGYFGFAVGYRKRNEWIKLFVKSEREKPAAEPVQRSNDKILDTSVIIDGRIADIATT
HHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHCCCCCEEEEEEEECCCHHHHHHH
GFVEGTLIVPQFVIGELQYIADSSDTLKRNRGRRGLDILKELQENKRIQVEIYDGDFEDV
CCCCCEEEHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCCCC
PEVDIKLIKLAELKNGIVVTNDYNLNKVCEVRNVPVLNINDLANAVKQIVIPGEEMVVTV
CCHHHHHHHHHHHCCCEEEECCCCCHHHHHHCCCCEEEHHHHHHHHHHHCCCCHHHEEHH
IKEGKEQNQGVAYLEDGTMVVVEGGRKLISKTLPVVVTSVLQTSAGRMIFARPE
HHCCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCC
>Mature Secondary Structure
MKIAVRIGFILIGLVVGWFGIIEATLLLADLGMNVPEWLTIPYVASLIGGLIFFILSLFL
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TDGVVAFIRFVEERLVRLPVGDILFGSIGLIIGLLIAFLISVSLEVTNIFLLSKIVPIFV
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TALFGYFGFAVGYRKRNEWIKLFVKSEREKPAAEPVQRSNDKILDTSVIIDGRIADIATT
HHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHCCCCCEEEEEEEECCCHHHHHHH
GFVEGTLIVPQFVIGELQYIADSSDTLKRNRGRRGLDILKELQENKRIQVEIYDGDFEDV
CCCCCEEEHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCCCC
PEVDIKLIKLAELKNGIVVTNDYNLNKVCEVRNVPVLNINDLANAVKQIVIPGEEMVVTV
CCHHHHHHHHHHHCCCEEEECCCCCHHHHHHCCCCEEEHHHHHHHHHHHCCCCHHHEEHH
IKEGKEQNQGVAYLEDGTMVVVEGGRKLISKTLPVVVTSVLQTSAGRMIFARPE
HHCCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 7510287 [H]