Click here to switch to the map view.

The map label for this gene is secE [H]

Identifier: 229917373

GI number: 229917373

Start: 1592828

End: 1592998

Strand: Reverse

Name: secE [H]

Synonym: EAT1b_1648

Alternate gene names: 229917373

Gene position: 1592998-1592828 (Counterclockwise)

Preceding gene: 229917374

Following gene: 229917372

Centisome position: 53.1

GC content: 42.69

Gene sequence:

>171_bases
ATGAACTTTTTGCGCGACGTATGGAAAGAGTTGAAGAAAACGAGTTGGCCGACTCGTAAAGAACTCACGAAATATACCAT
TACTGTCATCGCGACTGTTGTCGTGATTGGCCTGTTCGTGTTCGGCGTAGATACTGGCGTCAGTTATCTCGTCAATTTAT
TGATTAACTAA

Upstream 100 bases:

>100_bases
CGGCTTGAAATGAAGAAGTTTTGTCGCCGCTGTAACGCGCATACGCTGCATCGGGAATCAAAGTAACGTAGATTGGCATT
CAATGTAGGAGGAAGCTACC

Downstream 100 bases:

>100_bases
GGAAGAGGTGAAAGCCGTGGAGAAACAATGGTTTGTTGTCCAGACGTACTCAGGTTTTGAGAATAACGTCAAAGAAAACC
TAGAACGTCGAATCGGTTCG

Product: preprotein translocase, SecE subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 56; Mature: 56

Protein sequence:

>56_residues
MNFLRDVWKELKKTSWPTRKELTKYTITVIATVVVIGLFVFGVDTGVSYLVNLLIN

Sequences:

>Translated_56_residues
MNFLRDVWKELKKTSWPTRKELTKYTITVIATVVVIGLFVFGVDTGVSYLVNLLIN
>Mature_56_residues
MNFLRDVWKELKKTSWPTRKELTKYTITVIATVVVIGLFVFGVDTGVSYLVNLLIN

Specific function: Essential for protein export [H]

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secE/SEC61-gamma family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001901
- InterPro:   IPR005807 [H]

Pfam domain/function: PF00584 SecE [H]

EC number: NA

Molecular weight: Translated: 6432; Mature: 6432

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS01067 SECE_SEC61G

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFLRDVWKELKKTSWPTRKELTKYTITVIATVVVIGLFVFGVDTGVSYLVNLLIN
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNFLRDVWKELKKTSWPTRKELTKYTITVIATVVVIGLFVFGVDTGVSYLVNLLIN
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7968510; 9384377 [H]