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The map label for this gene is ybaF [H]

Identifier: 229917327

GI number: 229917327

Start: 1558626

End: 1559417

Strand: Reverse

Name: ybaF [H]

Synonym: EAT1b_1602

Alternate gene names: 229917327

Gene position: 1559417-1558626 (Counterclockwise)

Preceding gene: 229917328

Following gene: 229917326

Centisome position: 51.98

GC content: 50.0

Gene sequence:

>792_bases
ATGATTATCGGTCAATATATACCTGGACATTCGTGGCTTCATTCCCTCGATGCGCGTGCCAAGACGCTCTTCATTTTAGG
GTTCATCCCGGTTGTCTTTTTAGCTGACAACGTATGGACGAATTTGTTTTTACTCGCGTTCACGTTGTTTGCGGTCAAAC
TGTCACAGTTATCGTGGCGCTATTTATGGAACGGTCTTCGCATGATCTTATTTTTGATCGTCTTCACGTTGATTTTACAA
CTGTTATTCAATCGAGACGGCACACTCCTGTTCGAATTAGGACCGATTGCGATTTATTCGGAAGGAATTCGAATGGGGCT
GATTGTCTCGCTGCGCTTCTTTTATCTCGTCATGTTGACGACACTCGTGACGTTGACGACGACACCGATGGAATTGACCG
ATTCGATTGAAGCAGGGCTACGACCATTCGAACGGATTCGTGTGCCGGCCCATGAGATTGCGTTGATGCTCTCCATCTCA
CTTCGTTTCCTACCGACGCTTGCAGATGAGACGGACCGGATCATGAAAGCCCAGCAGGCGCGTGGGGTCGATTTGATGAG
TGGACCTTGGAAATCCCGCCTAAAAGGGGTCATCCCGCTCTTGATTCCATTGTTCATCTCCGCGTTTAAGCGTGCTGAGG
ACCTTGCTACGGCCATGGAGGCCCGCGGCTACCGTGGGGGAGAAGGGCGGACGAGGTTGCGTGAGATGGAGTGGCAAATG
CGAGACACAGCCGTATTGCTCATCTTTGTCGCGTTGACACTCATTTTGTTTGGATTGAGAGGGATTGGATGA

Upstream 100 bases:

>100_bases
GTGACATGGCGCCAGTTCTTGGGGAAACGGCAATCCCGCTCGTACGAACCGAGAGCGAGCTGGCGGATTGGGTGGCGGAA
CGGCTGAAAGGGGGAGCGAC

Downstream 100 bases:

>100_bases
GACGAATTAAACTGATTGTCGCCTATGACGGGACACATTATGCGGGATATCAGGTACAACCGAATGGCAATACCATTCAA
GCGGAGATTGAATCCGTCTT

Product: cobalt transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MIIGQYIPGHSWLHSLDARAKTLFILGFIPVVFLADNVWTNLFLLAFTLFAVKLSQLSWRYLWNGLRMILFLIVFTLILQ
LLFNRDGTLLFELGPIAIYSEGIRMGLIVSLRFFYLVMLTTLVTLTTTPMELTDSIEAGLRPFERIRVPAHEIALMLSIS
LRFLPTLADETDRIMKAQQARGVDLMSGPWKSRLKGVIPLLIPLFISAFKRAEDLATAMEARGYRGGEGRTRLREMEWQM
RDTAVLLIFVALTLILFGLRGIG

Sequences:

>Translated_263_residues
MIIGQYIPGHSWLHSLDARAKTLFILGFIPVVFLADNVWTNLFLLAFTLFAVKLSQLSWRYLWNGLRMILFLIVFTLILQ
LLFNRDGTLLFELGPIAIYSEGIRMGLIVSLRFFYLVMLTTLVTLTTTPMELTDSIEAGLRPFERIRVPAHEIALMLSIS
LRFLPTLADETDRIMKAQQARGVDLMSGPWKSRLKGVIPLLIPLFISAFKRAEDLATAMEARGYRGGEGRTRLREMEWQM
RDTAVLLIFVALTLILFGLRGIG
>Mature_263_residues
MIIGQYIPGHSWLHSLDARAKTLFILGFIPVVFLADNVWTNLFLLAFTLFAVKLSQLSWRYLWNGLRMILFLIVFTLILQ
LLFNRDGTLLFELGPIAIYSEGIRMGLIVSLRFFYLVMLTTLVTLTTTPMELTDSIEAGLRPFERIRVPAHEIALMLSIS
LRFLPTLADETDRIMKAQQARGVDLMSGPWKSRLKGVIPLLIPLFISAFKRAEDLATAMEARGYRGGEGRTRLREMEWQM
RDTAVLLIFVALTLILFGLRGIG

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003339 [H]

Pfam domain/function: PF02361 CbiQ [H]

EC number: NA

Molecular weight: Translated: 29908; Mature: 29908

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]