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The map label for this gene is ybbR [H]

Identifier: 229917317

GI number: 229917317

Start: 1544307

End: 1545587

Strand: Reverse

Name: ybbR [H]

Synonym: EAT1b_1592

Alternate gene names: 229917317

Gene position: 1545587-1544307 (Counterclockwise)

Preceding gene: 229917318

Following gene: 229917316

Centisome position: 51.52

GC content: 47.07

Gene sequence:

>1281_bases
GTGATTGATCAGTGGTTACAACATAAGTGGTTTCTCCGCTTCATCGCACTTGCTTTAGCCGTCCTTTTATACTTAATGGT
CGCTGAGACCAGCTCTTCGAATAACGCCTCAAGCGCATTGCCAATCGTCGGACAAAGTTCCATGACGCTCGATGTGCCGG
TCGAAGTATTTTTTGATGAGGTCCAGTATGTCGCATATAATGTTCCGGAAGAGATGGGTGTTGAGCTTCAAGGACCATCT
AGTAGTTTAACGATGACGAAATTGGTGAAAGATTATCAAGTGTTCGTCGATTTGACCAATCTTGGCACTGGATTCCATCG
TGTCCCCGTTGAGGCGCGTGGTTTCGGCGGAGATGTCAATGTCAAGCTAGATCGAGAGACTGTCGAAATCTATATCGATC
GGAAACAAACGATTGAAGTGCCTGTGTCCGTGAATCTGTTGAACAAAGATCAATTACCGGACGGCAAAGTCGCGGGCGAT
GTTGAAATCGAACCGTCGACTGTTAAGGTCACAGGAGGCGCGAGTCGGATTCAAAACGTCAAAGAAATCACATTGAATGT
GGATGTTTCCAATCAAAGCCAGACGTTCACTCGTGAGATTCCACCGACCATTTTAGATGCGAATGGAAATCCGTTGAACG
TGTCGGTCGATCCAAATATCATCAATGTGACCGTTCCGATTTACAATGAAAGTGCGATGATTCCAATCGAGGTCGTCACG
AGCGGTGAGGTGGCGGATGACTTCCGGTTAGTCGATACGTTACTTGGTGAGACGGAAGTCCGTGTCTTTGCACCAAAAGC
GGTGTTAGATGAACTCCAACAAGTGGAGACGGAACCGATTGAACTTGACGATTTAACGAAGTCGGAAAAAGTGACCGCTA
CCCTTCGTCTTCCAGAAGGGGCGACTTCACTCGGTAAAAAAGAAGTAGAAGTCCAGGTACTCGTTCGTCCAAATGATGAG
ACGAAAGATGACACAGGTGAGTTGACGGAGCGGATTCGATTGACCGTTCCAATCAATGTCCGTGGATATGACCGGACGAA
TTTCACGATTCAAACGCAAGATGTGGTCAGCGTAACGCTCTCGGGCAAACGTTCCCTTCTTGAAAGCATCTCATCAAACA
GTGTCAACGTGACGTTGGATCTGACTGGATTACCGAGCGGAACACATGCGGTCGATGCAGATTATGAAGTACCAAAAGGC
GTGACCGTGATCTCGCCAAAGACAATCGATGTTCAATTGACGGGCGTCGATGAAGAAACAGAAACATCTTCCATTCAATA
A

Upstream 100 bases:

>100_bases
GGACGAAGAAGCGCTTCGCAATAAATTAATTCAAGAACTCGTCATCGAAGAAAAAGAGGCGACCCTCTCGTTCTTCGGCA
AAAAAGGAGGGGATAAGTAA

Downstream 100 bases:

>100_bases
AGATGTTCAATCATACAAAAGTGAGGATTTAATCTTATGGGTAAATATTTTGGAACAGATGGAGTTCGCGGTGTTGCCAA
CTCTGAGTTAACTGCGGAAT

Product: YbbR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MIDQWLQHKWFLRFIALALAVLLYLMVAETSSSNNASSALPIVGQSSMTLDVPVEVFFDEVQYVAYNVPEEMGVELQGPS
SSLTMTKLVKDYQVFVDLTNLGTGFHRVPVEARGFGGDVNVKLDRETVEIYIDRKQTIEVPVSVNLLNKDQLPDGKVAGD
VEIEPSTVKVTGGASRIQNVKEITLNVDVSNQSQTFTREIPPTILDANGNPLNVSVDPNIINVTVPIYNESAMIPIEVVT
SGEVADDFRLVDTLLGETEVRVFAPKAVLDELQQVETEPIELDDLTKSEKVTATLRLPEGATSLGKKEVEVQVLVRPNDE
TKDDTGELTERIRLTVPINVRGYDRTNFTIQTQDVVSVTLSGKRSLLESISSNSVNVTLDLTGLPSGTHAVDADYEVPKG
VTVISPKTIDVQLTGVDEETETSSIQ

Sequences:

>Translated_426_residues
MIDQWLQHKWFLRFIALALAVLLYLMVAETSSSNNASSALPIVGQSSMTLDVPVEVFFDEVQYVAYNVPEEMGVELQGPS
SSLTMTKLVKDYQVFVDLTNLGTGFHRVPVEARGFGGDVNVKLDRETVEIYIDRKQTIEVPVSVNLLNKDQLPDGKVAGD
VEIEPSTVKVTGGASRIQNVKEITLNVDVSNQSQTFTREIPPTILDANGNPLNVSVDPNIINVTVPIYNESAMIPIEVVT
SGEVADDFRLVDTLLGETEVRVFAPKAVLDELQQVETEPIELDDLTKSEKVTATLRLPEGATSLGKKEVEVQVLVRPNDE
TKDDTGELTERIRLTVPINVRGYDRTNFTIQTQDVVSVTLSGKRSLLESISSNSVNVTLDLTGLPSGTHAVDADYEVPKG
VTVISPKTIDVQLTGVDEETETSSIQ
>Mature_426_residues
MIDQWLQHKWFLRFIALALAVLLYLMVAETSSSNNASSALPIVGQSSMTLDVPVEVFFDEVQYVAYNVPEEMGVELQGPS
SSLTMTKLVKDYQVFVDLTNLGTGFHRVPVEARGFGGDVNVKLDRETVEIYIDRKQTIEVPVSVNLLNKDQLPDGKVAGD
VEIEPSTVKVTGGASRIQNVKEITLNVDVSNQSQTFTREIPPTILDANGNPLNVSVDPNIINVTVPIYNESAMIPIEVVT
SGEVADDFRLVDTLLGETEVRVFAPKAVLDELQQVETEPIELDDLTKSEKVTATLRLPEGATSLGKKEVEVQVLVRPNDE
TKDDTGELTERIRLTVPINVRGYDRTNFTIQTQDVVSVTLSGKRSLLESISSNSVNVTLDLTGLPSGTHAVDADYEVPKG
VTVISPKTIDVQLTGVDEETETSSIQ

Specific function: Unknown

COG id: COG4856

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 YbbR-like domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012505 [H]

Pfam domain/function: PF07949 YbbR [H]

EC number: NA

Molecular weight: Translated: 46598; Mature: 46598

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDQWLQHKWFLRFIALALAVLLYLMVAETSSSNNASSALPIVGQSSMTLDVPVEVFFDE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEECCHHHHHHC
VQYVAYNVPEEMGVELQGPSSSLTMTKLVKDYQVFVDLTNLGTGFHRVPVEARGFGGDVN
EEEEEECCCHHHCCEEECCCCCCHHHHHHHCEEEEEEEECCCCCEEECCEEECCCCCEEE
VKLDRETVEIYIDRKQTIEVPVSVNLLNKDQLPDGKVAGDVEIEPSTVKVTGGASRIQNV
EEEECEEEEEEEECCEEEEEEEEEEEECCCCCCCCCCCCEEEECCCEEEEECCHHHHCCE
KEITLNVDVSNQSQTFTREIPPTILDANGNPLNVSVDPNIINVTVPIYNESAMIPIEVVT
EEEEEEEEECCCCCEEECCCCCEEECCCCCEEEEEECCCEEEEEEEEECCCCEEEEEEEE
SGEVADDFRLVDTLLGETEVRVFAPKAVLDELQQVETEPIELDDLTKSEKVTATLRLPEG
CCCCCHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCC
ATSLGKKEVEVQVLVRPNDETKDDTGELTERIRLTVPINVRGYDRTNFTIQTQDVVSVTL
CCCCCCEEEEEEEEECCCCCCCCCHHHHCEEEEEEEEEEEECCCCCCEEEEECCEEEEEE
SGKRSLLESISSNSVNVTLDLTGLPSGTHAVDADYEVPKGVTVISPKTIDVQLTGVDEET
CCHHHHHHHHCCCCEEEEEEEECCCCCCEEECCCCCCCCCEEEECCCEEEEEEECCCCCC
ETSSIQ
CCCCCC
>Mature Secondary Structure
MIDQWLQHKWFLRFIALALAVLLYLMVAETSSSNNASSALPIVGQSSMTLDVPVEVFFDE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEECCHHHHHHC
VQYVAYNVPEEMGVELQGPSSSLTMTKLVKDYQVFVDLTNLGTGFHRVPVEARGFGGDVN
EEEEEECCCHHHCCEEECCCCCCHHHHHHHCEEEEEEEECCCCCEEECCEEECCCCCEEE
VKLDRETVEIYIDRKQTIEVPVSVNLLNKDQLPDGKVAGDVEIEPSTVKVTGGASRIQNV
EEEECEEEEEEEECCEEEEEEEEEEEECCCCCCCCCCCCEEEECCCEEEEECCHHHHCCE
KEITLNVDVSNQSQTFTREIPPTILDANGNPLNVSVDPNIINVTVPIYNESAMIPIEVVT
EEEEEEEEECCCCCEEECCCCCEEECCCCCEEEEEECCCEEEEEEEEECCCCEEEEEEEE
SGEVADDFRLVDTLLGETEVRVFAPKAVLDELQQVETEPIELDDLTKSEKVTATLRLPEG
CCCCCHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCC
ATSLGKKEVEVQVLVRPNDETKDDTGELTERIRLTVPINVRGYDRTNFTIQTQDVVSVTL
CCCCCCEEEEEEEEECCCCCCCCCHHHHCEEEEEEEEEEEECCCCCCEEEEECCEEEEEE
SGKRSLLESISSNSVNVTLDLTGLPSGTHAVDADYEVPKGVTVISPKTIDVQLTGVDEET
CCHHHHHHHHCCCCEEEEEEEECCCCCCEEECCCCCCCCCEEEECCCEEEEEEECCCCCC
ETSSIQ
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]