| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917298
Identifier: 229917298
GI number: 229917298
Start: 1526907
End: 1527647
Strand: Direct
Name: 229917298
Synonym: EAT1b_1573
Alternate gene names: NA
Gene position: 1526907-1527647 (Clockwise)
Preceding gene: 229917297
Following gene: 229917300
Centisome position: 50.9
GC content: 50.34
Gene sequence:
>741_bases ATGAGACGATGGGCGATATTCGGATTAAGTGCACTTTTACTCACGGGTTGTACAGATACGGTGGCAGACAATCCAACCCC AATCGAATCACCCGATGAACCCATCACCGAATGGACGCGTGAGGACTTTAAAGACGTCTATGACCAATACGAACAAACGA AACCGCTCCTTACTGCCCTTGAACAACAAGGAATCAAACCGTTTCGGGAGACGTTCGAACGGGTCATCATCGCAGGCAAC GGCCTCGAGCATACGTATGCGGATATTTACCCATTCAAGCTCGATGACGGGACGTATGCTACCATTTTCGATAGTCAGGA CGGAACGGTGATCAATGGTTCTGAGTCGGTCGCTCCGCTATTTTGGCAAGAGGAATCCTTCCTTCAATACGTCGAAGAGA TTGAAAATCGGAAATTCGGTACAAGTGCCCCACCTACCGATGTCGTCCTCACGCAGGATGAATTCCAAACGGTCTATGAC CGCCATGCCTACACGTCAGCCCTCCTCGTCGAACTCGATGAAGCGGGCGTCGAACTGGCACGGGAGCCAATCGATGACGT GATCATTGCCGGGAACGGTGTGACCGAAGTCACTGCCGACTTGTTCGTATTCGATGTCGAGAGCGGGTATGCCATCGTAT ATGATCAGGACGGAGAAATTTTAAAAGGCCCCGAATCCATCTCACCGCTCTTTTGGAACGAGAAGGACTATGTGGACCTG TTAGCCAAGAATGAAAGTTAA
Upstream 100 bases:
>100_bases TACGCGACACGTCCTCACCCCGAGTGAGAATGTGCACAGGTTCTGCTTTTTCATCATGAATGATAAAATGGTGGAAAATG TCAGTTAAGGGGATGGAAAC
Downstream 100 bases:
>100_bases TGCGTGTCACGTTGTAACTTACGATATTCCAGCAACAACTTGAGCCATTGTGCCGGTTTGTCGCTGGAATCTTTTTTGTC CCGACGATGTGCTGTGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MRRWAIFGLSALLLTGCTDTVADNPTPIESPDEPITEWTREDFKDVYDQYEQTKPLLTALEQQGIKPFRETFERVIIAGN GLEHTYADIYPFKLDDGTYATIFDSQDGTVINGSESVAPLFWQEESFLQYVEEIENRKFGTSAPPTDVVLTQDEFQTVYD RHAYTSALLVELDEAGVELAREPIDDVIIAGNGVTEVTADLFVFDVESGYAIVYDQDGEILKGPESISPLFWNEKDYVDL LAKNES
Sequences:
>Translated_246_residues MRRWAIFGLSALLLTGCTDTVADNPTPIESPDEPITEWTREDFKDVYDQYEQTKPLLTALEQQGIKPFRETFERVIIAGN GLEHTYADIYPFKLDDGTYATIFDSQDGTVINGSESVAPLFWQEESFLQYVEEIENRKFGTSAPPTDVVLTQDEFQTVYD RHAYTSALLVELDEAGVELAREPIDDVIIAGNGVTEVTADLFVFDVESGYAIVYDQDGEILKGPESISPLFWNEKDYVDL LAKNES >Mature_246_residues MRRWAIFGLSALLLTGCTDTVADNPTPIESPDEPITEWTREDFKDVYDQYEQTKPLLTALEQQGIKPFRETFERVIIAGN GLEHTYADIYPFKLDDGTYATIFDSQDGTVINGSESVAPLFWQEESFLQYVEEIENRKFGTSAPPTDVVLTQDEFQTVYD RHAYTSALLVELDEAGVELAREPIDDVIIAGNGVTEVTADLFVFDVESGYAIVYDQDGEILKGPESISPLFWNEKDYVDL LAKNES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27704; Mature: 27704
Theoretical pI: Translated: 3.78; Mature: 3.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRWAIFGLSALLLTGCTDTVADNPTPIESPDEPITEWTREDFKDVYDQYEQTKPLLTAL CCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EQQGIKPFRETFERVIIAGNGLEHTYADIYPFKLDDGTYATIFDSQDGTVINGSESVAPL HHCCCHHHHHHHHHEEEECCCCCCCHHCEEEEEECCCCEEEEEECCCCCEECCCCCCCCE FWQEESFLQYVEEIENRKFGTSAPPTDVVLTQDEFQTVYDRHAYTSALLVELDEAGVELA EECHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHEEEECHHHHHHH REPIDDVIIAGNGVTEVTADLFVFDVESGYAIVYDQDGEILKGPESISPLFWNEKDYVDL HCCCCCEEECCCCHHHEEEEEEEEEECCCEEEEECCCCCEECCCCCCCCCCCCCCCHHHH LAKNES EECCCC >Mature Secondary Structure MRRWAIFGLSALLLTGCTDTVADNPTPIESPDEPITEWTREDFKDVYDQYEQTKPLLTAL CCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EQQGIKPFRETFERVIIAGNGLEHTYADIYPFKLDDGTYATIFDSQDGTVINGSESVAPL HHCCCHHHHHHHHHEEEECCCCCCCHHCEEEEEECCCCEEEEEECCCCCEECCCCCCCCE FWQEESFLQYVEEIENRKFGTSAPPTDVVLTQDEFQTVYDRHAYTSALLVELDEAGVELA EECHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHEEEECHHHHHHH REPIDDVIIAGNGVTEVTADLFVFDVESGYAIVYDQDGEILKGPESISPLFWNEKDYVDL HCCCCCEEECCCCHHHEEEEEEEEEECCCEEEEECCCCCEECCCCCCCCCCCCCCCHHHH LAKNES EECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA