| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yeaC [H]
Identifier: 229917296
GI number: 229917296
Start: 1525127
End: 1526047
Strand: Reverse
Name: yeaC [H]
Synonym: EAT1b_1571
Alternate gene names: 229917296
Gene position: 1526047-1525127 (Counterclockwise)
Preceding gene: 229917299
Following gene: 229917295
Centisome position: 50.87
GC content: 52.44
Gene sequence:
>921_bases ATGGGCATGGAGCAGGTCATCAAACAGTTGAACGAAGTGTATTTAGGAAAAGAGGATGTCGTACGCCTCTGTTGTACGGC GTTACTCGCGGAAGGACATATTCTATTAGAAGATGTGCCGGGAACGGGGAAAACGTTACTTGCCAAAACAATTGCGGCCA GCTTCGACGGGGTGTTCTCCCGGATTCAATTCACGGCCGACCTATTACCGTCTGACGTGATTGGCGCAGATTATTTCAAC ATGCAGACGCAGACGTTCGACCATCGCCAAGGACCGATCTTTGCGAATATCGTCTTGATCGATGAAATCAACCGAGCGGT CCCACGAACGCAGTCCGCCTTGCTCGAGGCGATGGAAGAACGACAAGTCTCCATCGGGGGAGAGACGTATCCGATGCCGA AACCATTTTTCGTCATCGCGACGCAAAACCCGATCGAATCAGCGGGGACGTTCCCGTTACCGGATGCCCAACTCGATCGT TTCCTCATTTCGATTCCGGTCGGTTACCCTGATGTCGCGGAAGAGAGAGAACTCCTCTTACAAGTGATGCGCCAAACACG GAAAACCGTAGAGGCGGTCGCGACGTTAGACGAGTTACGCCGTGCTCAGGAGGAAGTGAAGCAAGTATCGATTCAAGATG ACGTCCTCGATTATTTACTCGGGCTCGTCCATGCGACCCGGGAACATGCATCCGTCGAGGTCGGTGTCAGTCCACGTGGA GCCATCGCGCTCATGCGAGCGTCTCAAAGTTATGCCTATCTGAACGATCGATTGTACGTCATTCCGGAAGATGTGAAAGC CGTGGCACCTTATGTCTTGTCCCATCGTTTGACGTTGACGCTTGAAGGAGGCATCAAATCGACGAAACAGGACATTATCC GTTACATCTTAGACACCGTCTCTGTGCCGGTAGAGGGCTGA
Upstream 100 bases:
>100_bases AGCGCAAGGGGGTACCTCCTTTTGAATTTTCAGACTATTTGTTGTTTATCTTACCATAAAAAGGTAAAGTTTGATTAAGA CAAAAAATGGAGGTCGTCAT
Downstream 100 bases:
>100_bases AGATGACCTTCTCGACACATAACGCCCTACAGAAACAATGGATTCCGGTTTATGGATTCGCTGGGGTGATTCTCGTATTC GTCCCGTACATGGAGATTGT
Product: ATPase associated with various cellular activities AAA_3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MGMEQVIKQLNEVYLGKEDVVRLCCTALLAEGHILLEDVPGTGKTLLAKTIAASFDGVFSRIQFTADLLPSDVIGADYFN MQTQTFDHRQGPIFANIVLIDEINRAVPRTQSALLEAMEERQVSIGGETYPMPKPFFVIATQNPIESAGTFPLPDAQLDR FLISIPVGYPDVAEERELLLQVMRQTRKTVEAVATLDELRRAQEEVKQVSIQDDVLDYLLGLVHATREHASVEVGVSPRG AIALMRASQSYAYLNDRLYVIPEDVKAVAPYVLSHRLTLTLEGGIKSTKQDIIRYILDTVSVPVEG
Sequences:
>Translated_306_residues MGMEQVIKQLNEVYLGKEDVVRLCCTALLAEGHILLEDVPGTGKTLLAKTIAASFDGVFSRIQFTADLLPSDVIGADYFN MQTQTFDHRQGPIFANIVLIDEINRAVPRTQSALLEAMEERQVSIGGETYPMPKPFFVIATQNPIESAGTFPLPDAQLDR FLISIPVGYPDVAEERELLLQVMRQTRKTVEAVATLDELRRAQEEVKQVSIQDDVLDYLLGLVHATREHASVEVGVSPRG AIALMRASQSYAYLNDRLYVIPEDVKAVAPYVLSHRLTLTLEGGIKSTKQDIIRYILDTVSVPVEG >Mature_305_residues GMEQVIKQLNEVYLGKEDVVRLCCTALLAEGHILLEDVPGTGKTLLAKTIAASFDGVFSRIQFTADLLPSDVIGADYFNM QTQTFDHRQGPIFANIVLIDEINRAVPRTQSALLEAMEERQVSIGGETYPMPKPFFVIATQNPIESAGTFPLPDAQLDRF LISIPVGYPDVAEERELLLQVMRQTRKTVEAVATLDELRRAQEEVKQVSIQDDVLDYLLGLVHATREHASVEVGVSPRGA IALMRASQSYAYLNDRLYVIPEDVKAVAPYVLSHRLTLTLEGGIKSTKQDIIRYILDTVSVPVEG
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 33898; Mature: 33767
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMEQVIKQLNEVYLGKEDVVRLCCTALLAEGHILLEDVPGTGKTLLAKTIAASFDGVFS CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHH RIQFTADLLPSDVIGADYFNMQTQTFDHRQGPIFANIVLIDEINRAVPRTQSALLEAMEE HHHHHHHHCCCHHCCCCHHCCCCCCCCCCCCCEEEEEEEEEHHHHHCCHHHHHHHHHHHH RQVSIGGETYPMPKPFFVIATQNPIESAGTFPLPDAQLDRFLISIPVGYPDVAEERELLL HHEECCCCCCCCCCCEEEEEECCCHHCCCCCCCCCHHHHHEEEEECCCCCCHHHHHHHHH QVMRQTRKTVEAVATLDELRRAQEEVKQVSIQDDVLDYLLGLVHATREHASVEVGVSPRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCEEEECCCCCC AIALMRASQSYAYLNDRLYVIPEDVKAVAPYVLSHRLTLTLEGGIKSTKQDIIRYILDTV CEEEEECCCCCEEECCEEEEECHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHH SVPVEG CCCCCC >Mature Secondary Structure GMEQVIKQLNEVYLGKEDVVRLCCTALLAEGHILLEDVPGTGKTLLAKTIAASFDGVFS CHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHH RIQFTADLLPSDVIGADYFNMQTQTFDHRQGPIFANIVLIDEINRAVPRTQSALLEAMEE HHHHHHHHCCCHHCCCCHHCCCCCCCCCCCCCEEEEEEEEEHHHHHCCHHHHHHHHHHHH RQVSIGGETYPMPKPFFVIATQNPIESAGTFPLPDAQLDRFLISIPVGYPDVAEERELLL HHEECCCCCCCCCCCEEEEEECCCHHCCCCCCCCCHHHHHEEEEECCCCCCHHHHHHHHH QVMRQTRKTVEAVATLDELRRAQEEVKQVSIQDDVLDYLLGLVHATREHASVEVGVSPRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCEEEECCCCCC AIALMRASQSYAYLNDRLYVIPEDVKAVAPYVLSHRLTLTLEGGIKSTKQDIIRYILDTV CEEEEECCCCCEEECCEEEEECHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHH SVPVEG CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]