Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

Click here to switch to the map view.

The map label for this gene is 229917283

Identifier: 229917283

GI number: 229917283

Start: 1515404

End: 1515718

Strand: Direct

Name: 229917283

Synonym: EAT1b_1558

Alternate gene names: NA

Gene position: 1515404-1515718 (Clockwise)

Preceding gene: 229917279

Following gene: 229917284

Centisome position: 50.52

GC content: 45.4

Gene sequence:

>315_bases
ATGAGTTCACGATTAACCTTTGCCTTAATCTTTCTCGGTCTTTTTTTAGTCGCCGTTTATTGGATGAGCACGTGGAATGA
CAACATGGTCGAAGGACAGATTGAACGAGTCGATATTCCCCAAATATTGATTGAATCTACCGAATCCTCTGAAGAAGTCA
CATTGCGTGTCATCTTAATCAATGATCAAACCGAAGTCACTGGCATCGTCAACAGCGTACAAGGACTACAGAGCGGCCAA
CTGGTGACAATCGAGGTCATTCCGACGGATTCGAACTTGAACATCGCACGCACGATCGAAGTCACCGCTCCATGA

Upstream 100 bases:

>100_bases
TTCTTGTGATTCCTACTATTTTTTCAAGTAATGAGAGAATTTCCGGGTAAAGGTAAATTAGATAAGATGCGAAACGGGAC
GACAAGGGAGTGAGGTAGAC

Downstream 100 bases:

>100_bases
TTTTTTGAAATGAAGCGTAACTTTTCCAGAACTGTGGAATATGAGAACAGAATCATAAAAAGGAGTGATCGGATTGATTT
CAAATAAATTACTATCTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MSSRLTFALIFLGLFLVAVYWMSTWNDNMVEGQIERVDIPQILIESTESSEEVTLRVILINDQTEVTGIVNSVQGLQSGQ
LVTIEVIPTDSNLNIARTIEVTAP

Sequences:

>Translated_104_residues
MSSRLTFALIFLGLFLVAVYWMSTWNDNMVEGQIERVDIPQILIESTESSEEVTLRVILINDQTEVTGIVNSVQGLQSGQ
LVTIEVIPTDSNLNIARTIEVTAP
>Mature_103_residues
SSRLTFALIFLGLFLVAVYWMSTWNDNMVEGQIERVDIPQILIESTESSEEVTLRVILINDQTEVTGIVNSVQGLQSGQL
VTIEVIPTDSNLNIARTIEVTAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11537; Mature: 11406

Theoretical pI: Translated: 3.75; Mature: 3.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRLTFALIFLGLFLVAVYWMSTWNDNMVEGQIERVDIPQILIESTESSEEVTLRVILI
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEECCCCCCEEEEEEEEE
NDQTEVTGIVNSVQGLQSGQLVTIEVIPTDSNLNIARTIEVTAP
CCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEEEECC
>Mature Secondary Structure 
SSRLTFALIFLGLFLVAVYWMSTWNDNMVEGQIERVDIPQILIESTESSEEVTLRVILI
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEECCCCCCEEEEEEEEE
NDQTEVTGIVNSVQGLQSGQLVTIEVIPTDSNLNIARTIEVTAP
CCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA