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The map label for this gene is ldcA [C]

Identifier: 229917281

GI number: 229917281

Start: 1513885

End: 1514889

Strand: Reverse

Name: ldcA [C]

Synonym: EAT1b_1556

Alternate gene names: 229917281

Gene position: 1514889-1513885 (Counterclockwise)

Preceding gene: 229917282

Following gene: 229917280

Centisome position: 50.5

GC content: 45.37

Gene sequence:

>1005_bases
ATGATTAAACCACCAAAGTTGCAAGTGAGGGATACGATAGGGATCATTACGCCTTCTTTTCCGGCACCTGTTCAGTTTGA
GGGGCGTTACCAACGTGGGGTTGAACAGCTCAAGCGGATGGGATTCAAGGTGAAAGAGGGCACGTGTACATATAAAACAG
AAGGATATCGGTCCTCGTCCATTCGGGATCGTGCTGACGAATTGAACGCATTTTTACATGATCCTGAAGTGAAAGCGATC
ATCAGTACAATTGGTGGAACAAATTCGAACTCGGTGTTACCATATATCGATTATGAACAACTCCGACGTCATCCTAAAAT
CATCATGGGATATAGTGATGTCACGGCAATCTTGATGGCCTGTTATGCCAAAACGGACGTCGTCACATTTTACGGTCCGG
CAATCGTCCCCTCATTCGGTGAATACGGAGGGATGTTCGAGACGGGGGAGCAATATGTCAAAGACATTCTCTGTTTAGAA
CGAACGGCTCCGTTTCAGTTACATATCCCTGATGAATGGACGGAAGAGATGCTCGATTGGTCGACGCAACAACGTGTCAA
GACGTTCCAACCGAATGAAGGATGGATTTCTCTGAAGGATGGAAAGGCACAAGGAACGTTGATTGGCGGGAATCTGAACA
CGATGTCTGGGTTCTTCAAGTCGGATTATTATCCCGATTTGAAAGGCGCGATTCTATTCCTAGAAGACTCGTTTAAGACG
ATGGCTGAAGAAGAACGTTCGCTTAGTATGCTGAAGCTGGCGGGTGTGTTTGATGAGATTTCGGGTCTGATTATCGGGAA
GCATGAGCATTTTCAAGATCAATCAGCTCCCTTCTCATTCAACGACTTGTTGCTTGAAATCATCGGAGAAAAAGATTTTC
CGATTTTGACGAATGTCGATATCGGTCACACCTTTCCATCACACGTTTTCCCGATTGGGATTCAAGTTGAGTTAGATACG
ACGAATGGGATTATCCGATTTTTAGAAGATGGGGTGTCGGAATGA

Upstream 100 bases:

>100_bases
AGTGAGAACGTTATCGGAAGACCCTGATTTATTTTGAAGCATGACTTACCACTCCTACGGTATAATGCGGTCATAATGAT
GTTACGAGGGAGTGGGGATC

Downstream 100 bases:

>100_bases
AGGAGCACCTCACTATTTTTGACGATAATCACCAGAAAATAGGGGAGAAGGAGCGAAATCAAGTTCATCTTGACGGGGAT
TGGCATGAGACGTTCCACTG

Product: peptidase U61 LD-carboxypeptidase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MIKPPKLQVRDTIGIITPSFPAPVQFEGRYQRGVEQLKRMGFKVKEGTCTYKTEGYRSSSIRDRADELNAFLHDPEVKAI
ISTIGGTNSNSVLPYIDYEQLRRHPKIIMGYSDVTAILMACYAKTDVVTFYGPAIVPSFGEYGGMFETGEQYVKDILCLE
RTAPFQLHIPDEWTEEMLDWSTQQRVKTFQPNEGWISLKDGKAQGTLIGGNLNTMSGFFKSDYYPDLKGAILFLEDSFKT
MAEEERSLSMLKLAGVFDEISGLIIGKHEHFQDQSAPFSFNDLLLEIIGEKDFPILTNVDIGHTFPSHVFPIGIQVELDT
TNGIIRFLEDGVSE

Sequences:

>Translated_334_residues
MIKPPKLQVRDTIGIITPSFPAPVQFEGRYQRGVEQLKRMGFKVKEGTCTYKTEGYRSSSIRDRADELNAFLHDPEVKAI
ISTIGGTNSNSVLPYIDYEQLRRHPKIIMGYSDVTAILMACYAKTDVVTFYGPAIVPSFGEYGGMFETGEQYVKDILCLE
RTAPFQLHIPDEWTEEMLDWSTQQRVKTFQPNEGWISLKDGKAQGTLIGGNLNTMSGFFKSDYYPDLKGAILFLEDSFKT
MAEEERSLSMLKLAGVFDEISGLIIGKHEHFQDQSAPFSFNDLLLEIIGEKDFPILTNVDIGHTFPSHVFPIGIQVELDT
TNGIIRFLEDGVSE
>Mature_334_residues
MIKPPKLQVRDTIGIITPSFPAPVQFEGRYQRGVEQLKRMGFKVKEGTCTYKTEGYRSSSIRDRADELNAFLHDPEVKAI
ISTIGGTNSNSVLPYIDYEQLRRHPKIIMGYSDVTAILMACYAKTDVVTFYGPAIVPSFGEYGGMFETGEQYVKDILCLE
RTAPFQLHIPDEWTEEMLDWSTQQRVKTFQPNEGWISLKDGKAQGTLIGGNLNTMSGFFKSDYYPDLKGAILFLEDSFKT
MAEEERSLSMLKLAGVFDEISGLIIGKHEHFQDQSAPFSFNDLLLEIIGEKDFPILTNVDIGHTFPSHVFPIGIQVELDT
TNGIIRFLEDGVSE

Specific function: L,D-carboxypeptidase [C]

COG id: COG1619

COG function: function code V; Uncharacterized proteins, homologs of microcin C7 resistance protein MccF

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S66 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003507 [H]

Pfam domain/function: PF02016 Peptidase_S66 [H]

EC number: NA

Molecular weight: Translated: 37609; Mature: 37609

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKPPKLQVRDTIGIITPSFPAPVQFEGRYQRGVEQLKRMGFKVKEGTCTYKTEGYRSSS
CCCCCCEEEEEEEEEECCCCCCCEEECCHHHHHHHHHHHCCCEEECCEEEEECCCCCCCH
IRDRADELNAFLHDPEVKAIISTIGGTNSNSVLPYIDYEQLRRHPKIIMGYSDVTAILMA
HHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEECEECHHHHCCCCEEEEECHHHHHHHHH
CYAKTDVVTFYGPAIVPSFGEYGGMFETGEQYVKDILCLERTAPFQLHIPDEWTEEMLDW
HHHHCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCC
STQQRVKTFQPNEGWISLKDGKAQGTLIGGNLNTMSGFFKSDYYPDLKGAILFLEDSFKT
CHHHHHHCCCCCCCEEEEECCCCCCEEECCCCHHHHHHHHCCCCCCCCCEEEEEECHHHH
MAEEERSLSMLKLAGVFDEISGLIIGKHEHFQDQSAPFSFNDLLLEIIGEKDFPILTNVD
HHHHHHHHHHHHHHHHHHHHCCEEEECHHHCCCCCCCCCHHHHHHHHHCCCCCCEEECCC
IGHTFPSHVFPIGIQVELDTTNGIIRFLEDGVSE
CCCCCCCCEEEEEEEEEEECCCHHHHHHHHCCCC
>Mature Secondary Structure
MIKPPKLQVRDTIGIITPSFPAPVQFEGRYQRGVEQLKRMGFKVKEGTCTYKTEGYRSSS
CCCCCCEEEEEEEEEECCCCCCCEEECCHHHHHHHHHHHCCCEEECCEEEEECCCCCCCH
IRDRADELNAFLHDPEVKAIISTIGGTNSNSVLPYIDYEQLRRHPKIIMGYSDVTAILMA
HHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEECEECHHHHCCCCEEEEECHHHHHHHHH
CYAKTDVVTFYGPAIVPSFGEYGGMFETGEQYVKDILCLERTAPFQLHIPDEWTEEMLDW
HHHHCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCC
STQQRVKTFQPNEGWISLKDGKAQGTLIGGNLNTMSGFFKSDYYPDLKGAILFLEDSFKT
CHHHHHHCCCCCCCEEEEECCCCCCEEECCCCHHHHHHHHCCCCCCCCCEEEEEECHHHH
MAEEERSLSMLKLAGVFDEISGLIIGKHEHFQDQSAPFSFNDLLLEIIGEKDFPILTNVD
HHHHHHHHHHHHHHHHHHHHCCEEEECHHHCCCCCCCCCHHHHHHHHHCCCCCCEEECCC
IGHTFPSHVFPIGIQVELDTTNGIIRFLEDGVSE
CCCCCCCCEEEEEEEEEEECCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]