Click here to switch to the map view.

The map label for this gene is yfnB [H]

Identifier: 229917261

GI number: 229917261

Start: 1499868

End: 1500569

Strand: Reverse

Name: yfnB [H]

Synonym: EAT1b_1536

Alternate gene names: 229917261

Gene position: 1500569-1499868 (Counterclockwise)

Preceding gene: 229917262

Following gene: 229917259

Centisome position: 50.02

GC content: 49.15

Gene sequence:

>702_bases
ATGAAACGTTATGAAGCGATTTTATTTGATATTGATGACACGCTACTAGATTTTAAACAAAGTGAACATGTCGCCTTGGA
ACAGTTACTTGCATCCTACAATGTCCGGATGACGGATGAGGTGAAGTCGCGCTATGTCGACATCAACACGGGCCTGTGGC
GTGCGTTTGAGCGCGGCGAAGTGGACCGGGAAGAAGTGCTCATCGGTCGTCATACGAAACTGTTCGATTCGCTCGGTCTC
ACGGTCGATGGACCATATGTCGAACAGCAATATCGAGACTATTTACATGCAGGCGTGCACATGGTCGATGGTGCTTTGGA
GGTCGTGCAAAAGCTGAGCAACGATTATCCGCTCTATATCGTCACAAACGGTGTGACGGAGACGCAATTCAAACGGTTAG
AGTCATCTGGACTATTGCCGTACTTCCAAGATGTCTTCGTATCGGATGCGACCGGCTCGCAAAAACCGATGAAACCGTTT
TTCGACTATGTCTTCGACCGAATCCCGAATGTAGAGCCAGAGAAGGGGTTGATTATCGGTGACTCGGTCACGGCAGACAT
CGCCGGTGGGCGGATGTATGGTTTGGATACGTGCTGGTTCAACCCGAACGAAGTGGCCGCGACAATCGAGTCAACGTATG
AGATTCGACATTTAAACGAGTTGAAATCGCTTCTCTACGTTCAAGCCGGATTGAGTGAATGA

Upstream 100 bases:

>100_bases
ATCTAATAGACATTGAGAGGGGGATACGTCATATCTCCCTTTTTTGATGTTCGTTTCTACTTCCTGTACAGTTAGACGAA
GAGAGGGGTTAGAAAGAGAT

Downstream 100 bases:

>100_bases
GCTGGCAAGCGATTTGGTAGTTGAGCAAGTACTTCCGGATAGAGCGTGACGTCTTGAAGACGGTCAAGCTTTTGCCAACG
ATAAATCAGGTGATCTCCTT

Product: HAD-superfamily hydrolase, subfamily IA, variant 1

Products: (R)-2-hydroxyacid; halide

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MKRYEAILFDIDDTLLDFKQSEHVALEQLLASYNVRMTDEVKSRYVDINTGLWRAFERGEVDREEVLIGRHTKLFDSLGL
TVDGPYVEQQYRDYLHAGVHMVDGALEVVQKLSNDYPLYIVTNGVTETQFKRLESSGLLPYFQDVFVSDATGSQKPMKPF
FDYVFDRIPNVEPEKGLIIGDSVTADIAGGRMYGLDTCWFNPNEVAATIESTYEIRHLNELKSLLYVQAGLSE

Sequences:

>Translated_233_residues
MKRYEAILFDIDDTLLDFKQSEHVALEQLLASYNVRMTDEVKSRYVDINTGLWRAFERGEVDREEVLIGRHTKLFDSLGL
TVDGPYVEQQYRDYLHAGVHMVDGALEVVQKLSNDYPLYIVTNGVTETQFKRLESSGLLPYFQDVFVSDATGSQKPMKPF
FDYVFDRIPNVEPEKGLIIGDSVTADIAGGRMYGLDTCWFNPNEVAATIESTYEIRHLNELKSLLYVQAGLSE
>Mature_233_residues
MKRYEAILFDIDDTLLDFKQSEHVALEQLLASYNVRMTDEVKSRYVDINTGLWRAFERGEVDREEVLIGRHTKLFDSLGL
TVDGPYVEQQYRDYLHAGVHMVDGALEVVQKLSNDYPLYIVTNGVTETQFKRLESSGLLPYFQDVFVSDATGSQKPMKPF
FDYVFDRIPNVEPEKGLIIGDSVTADIAGGRMYGLDTCWFNPNEVAATIESTYEIRHLNELKSLLYVQAGLSE

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. YjjG family [H]

Homologues:

Organism=Escherichia coli, GI1790833, Length=227, Percent_Identity=29.5154185022026, Blast_Score=106, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR011951 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: 3.8.1.2

Molecular weight: Translated: 26582; Mature: 26582

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYEAILFDIDDTLLDFKQSEHVALEQLLASYNVRMTDEVKSRYVDINTGLWRAFERGE
CCCCEEEEEECCHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHEEECCHHHHHHHHCCC
VDREEVLIGRHTKLFDSLGLTVDGPYVEQQYRDYLHAGVHMVDGALEVVQKLSNDYPLYI
CCHHHHHHCCHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VTNGVTETQFKRLESSGLLPYFQDVFVSDATGSQKPMKPFFDYVFDRIPNVEPEKGLIIG
EECCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEC
DSVTADIAGGRMYGLDTCWFNPNEVAATIESTYEIRHLNELKSLLYVQAGLSE
CCCEEECCCCEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKRYEAILFDIDDTLLDFKQSEHVALEQLLASYNVRMTDEVKSRYVDINTGLWRAFERGE
CCCCEEEEEECCHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHEEECCHHHHHHHHCCC
VDREEVLIGRHTKLFDSLGLTVDGPYVEQQYRDYLHAGVHMVDGALEVVQKLSNDYPLYI
CCHHHHHHCCHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VTNGVTETQFKRLESSGLLPYFQDVFVSDATGSQKPMKPFFDYVFDRIPNVEPEKGLIIG
EECCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEC
DSVTADIAGGRMYGLDTCWFNPNEVAATIESTYEIRHLNELKSLLYVQAGLSE
CCCEEECCCCEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: (S)-2-haloacid; H2O

Specific reaction: (S)-2-haloacid + H2O = (R)-2-hydroxyacid + halide

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]