| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is thiE [H]
Identifier: 229917252
GI number: 229917252
Start: 1494113
End: 1494754
Strand: Reverse
Name: thiE [H]
Synonym: EAT1b_1527
Alternate gene names: 229917252
Gene position: 1494754-1494113 (Counterclockwise)
Preceding gene: 229917253
Following gene: 229917251
Centisome position: 49.83
GC content: 52.96
Gene sequence:
>642_bases TTGACGTTCTGTACGAAACAAGCGCTCGCTAAGCAGCTTCGCCTTTACTTTGTGTGTGGAACGACGGACGCGTCCGATTT GGTAGCGACCGTCAAAACGGCTCTTCTATGTGGTGTGACATGTTTTCAATTTCGCGAAAAAGGTAAAGATGCATTGTATG GAGATGAAAAAGAAGCGATGGCAAGGACGCTCCACCGTCTGTGTCGAGAAGCGGGTGTTCCGTTCATCGTCAATGACGAC GTCGACTTGGCGCTCGCGATTGACGCGGATGGCATCCACGTTGGACAGGATGACTTACCTGCCAAACAGGTTCGAGAACG GCTAGGACCAGATAAATGGTTGGGGGTGTCTGTCCATACGATGGAGGAAGTCAGAACGGCTCTTCCATTTGCAGATTATG TCGGCATCGGTCCGATTCATGAGACGCAAAGTAAGTTGGATGCAGGACAAGTGCGTGGTACGGAACTGATTCAACAAGTT CGCCGACACCACCCACTGCTTCCGATTGTGGGGATCGGGGGCATTCGTCCAGAGCATGTCCCTGCTATTATGGCTGACGG GGCTGACGGTGTTGCCGTCATCTCTGCCATCGCTTCTGCACCGGATGTAGCAACGGCTACCCGGCGTTTCGCTTGTCTCT GA
Upstream 100 bases:
>100_bases TTTATCCATCAGGCGATTGCACATGGATTATCGATTGGACAGGGGCATGGACCGACGAATCATTGGGGACATCGTTTAGC GAAAGAAGAGGTGATTACCG
Downstream 100 bases:
>100_bases ATTCAATTTTTGAGGAGGAAGACAGATGAACGTATTTGTTATCGGTGCAAACGGTCAGATTGGCCGTCAGTTTGTCGAAA AATTACACAATGAAGGGAAG
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MTFCTKQALAKQLRLYFVCGTTDASDLVATVKTALLCGVTCFQFREKGKDALYGDEKEAMARTLHRLCREAGVPFIVNDD VDLALAIDADGIHVGQDDLPAKQVRERLGPDKWLGVSVHTMEEVRTALPFADYVGIGPIHETQSKLDAGQVRGTELIQQV RRHHPLLPIVGIGGIRPEHVPAIMADGADGVAVISAIASAPDVATATRRFACL
Sequences:
>Translated_213_residues MTFCTKQALAKQLRLYFVCGTTDASDLVATVKTALLCGVTCFQFREKGKDALYGDEKEAMARTLHRLCREAGVPFIVNDD VDLALAIDADGIHVGQDDLPAKQVRERLGPDKWLGVSVHTMEEVRTALPFADYVGIGPIHETQSKLDAGQVRGTELIQQV RRHHPLLPIVGIGGIRPEHVPAIMADGADGVAVISAIASAPDVATATRRFACL >Mature_212_residues TFCTKQALAKQLRLYFVCGTTDASDLVATVKTALLCGVTCFQFREKGKDALYGDEKEAMARTLHRLCREAGVPFIVNDDV DLALAIDADGIHVGQDDLPAKQVRERLGPDKWLGVSVHTMEEVRTALPFADYVGIGPIHETQSKLDAGQVRGTELIQQVR RHHPLLPIVGIGGIRPEHVPAIMADGADGVAVISAIASAPDVATATRRFACL
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790426, Length=195, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6325042, Length=219, Percent_Identity=33.7899543378995, Blast_Score=114, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 22984; Mature: 22853
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFCTKQALAKQLRLYFVCGTTDASDLVATVKTALLCGVTCFQFREKGKDALYGDEKEAM CCCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH ARTLHRLCREAGVPFIVNDDVDLALAIDADGIHVGQDDLPAKQVRERLGPDKWLGVSVHT HHHHHHHHHHCCCCEEECCCCCEEEEECCCCEEECCCCCCHHHHHHHCCCCCEECCCHHH MEEVRTALPFADYVGIGPIHETQSKLDAGQVRGTELIQQVRRHHPLLPIVGIGGIRPEHV HHHHHHHCCHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCCCCCC PAIMADGADGVAVISAIASAPDVATATRRFACL CEEEECCCCHHHHHHHHHCCCCHHHHHHHHHCC >Mature Secondary Structure TFCTKQALAKQLRLYFVCGTTDASDLVATVKTALLCGVTCFQFREKGKDALYGDEKEAM CCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH ARTLHRLCREAGVPFIVNDDVDLALAIDADGIHVGQDDLPAKQVRERLGPDKWLGVSVHT HHHHHHHHHHCCCCEEECCCCCEEEEECCCCEEECCCCCCHHHHHHHCCCCCEECCCHHH MEEVRTALPFADYVGIGPIHETQSKLDAGQVRGTELIQQVRRHHPLLPIVGIGGIRPEHV HHHHHHHCCHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCCCCCC PAIMADGADGVAVISAIASAPDVATATRRFACL CEEEECCCCHHHHHHHHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA