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The map label for this gene is yedQ [C]

Identifier: 229917250

GI number: 229917250

Start: 1491772

End: 1493337

Strand: Reverse

Name: yedQ [C]

Synonym: EAT1b_1525

Alternate gene names: 229917250

Gene position: 1493337-1491772 (Counterclockwise)

Preceding gene: 229917251

Following gene: 229917249

Centisome position: 49.78

GC content: 45.15

Gene sequence:

>1566_bases
ATGACCGAGATGTTCATTTATCTGGCGGTCTATTTGTTGCCGTCATTTTTACTCGGCTTTTTAGCACTCGATGTCTTTCA
ACGAAATCCGAATAAAGTCGAGCATCGTTTGCTGAGCCTGTTTGTGTTTGGCTATTCGATGCTTTTCTTAGCGGAATTCG
TTCGCCATCTTTCTCCGATTGAATATAGTCCGGCACTCATTGCCTATTGGTTTGGGAACGCCGGGATTTTCATTTTTATC
TTCTCTGTTCATTTCATATTGAGCATCACAGGCGTCGGCGCGAAGGCACCGAAGTGGCTCTATCCCTGGGTCGTGTACTT
ACCTCTGATTCCCGTCATATTGACGTATATCCGGCGAGAGAACATCATCAACAGTCAACAGTTTGAGCAAGTGGGGATCT
GGATTTATCCCGAGTTCAATTCATCGTATTTGATTACGTTGACCGTCGGTAACATCTTTCACATCTTGATCATCGGGCTC
ATTTTTTATGCCCTCAAACGTGCAGAACGAAGAGAGCACCAACGCGTGTTGCGCATGCTCTTTTGGACGGCGAATGTCGT
ATTGTTGTGGGATGTTGTCTTCGGTTATTTTCAATTCCGCGGGTTCATTCCGCCGTACTCTTATATGTATGGAGGACTCG
TTTGGGCAGTCGCGTTGGTCATCGCGATGAATCGTTTAGATTTCTTGACCTCTTACGTGAAACGATATGGGACACTGTAT
AACTTGAATCCATCTGCCATCTTATTGATTGATCCCGATGGAAAAGTGGAAAGTGCGAATCCTGCTGCGCGAACATTGTT
TCATACGGTCCGTGTCGTGAATGAACGCTTCGTCGATTTGTTGCCAGAAAAGAAAAAAGCAGAATGGGTGGAACACTATC
ACCAACATGTTCGGACACGTAAAAAGTTTATAGAGTTCGAAACGAAGATTATGACGAAATCTGGGCAAGAGCTTTACGTT
GTCATTGATGGGGATTTTGTCGATATCGACCGCACGATTCACGGGATGATTATCATTCGGGATGTCCACTCGTTTAAAGA
GGCCGAGCAAACAATCCGATTCTTTGCCTATCATGACCCACTGACGAAGTTGGCCAACCGACGTGCATTTTATGAACGGG
CAGACCATGCGTTGCTCAGTTCCTCGAGGCTGTCGTTATTGATTATTGATTTGGACGGTTTTAAAGCAGTCAATGATACG
TACGGGCACCAGATTGGAGATCATTTCTTAACTCATTTGGGTGGGTTGTTGGAAGCGTCGACACGAGACGTTGGCTTGGC
CTCTCGCGTTGGTGGGGATGAGTTTTATATTTATTTAGTGGATTTAACGGAATCGGAAGTGCGCGGCTTTATTCATACAC
TTCAGATGACGTTAAATCAAAACCCGTACCAAACGTCCGATGTGTCGATTCCGATCCGGGCGAGTATTGGGGTCAGTCAT
GCTCCCGACCAAGGAACAAATTTAGACACATTGATTCATAAAGCGGATCAGGCGATGTATCAGATCAAGCAAGATGGAAA
AAATGATTATGCCATCTATGACGAAGCGTTACATGGTCCGAAATAA

Upstream 100 bases:

>100_bases
AAGAACGGGATGTGGCTCATCCCGTTTTTTGTCGCGTTAAAGAGGGAAAAGTCAGCAGAATAGCGAAATGAAGAATTATG
AATAGGTGAGGAGGTTCCGC

Downstream 100 bases:

>100_bases
AGGGAAAATAGAAGTGTTTGATTATGGAAAGGAGGATGCAACATGTCAGAAAGACCGTTAGTGACGATGCGCGCCGAGGG
AGAAGCCGGAGGCGTCAAGA

Product: diguanylate cyclase with PAS/PAC sensor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 521; Mature: 520

Protein sequence:

>521_residues
MTEMFIYLAVYLLPSFLLGFLALDVFQRNPNKVEHRLLSLFVFGYSMLFLAEFVRHLSPIEYSPALIAYWFGNAGIFIFI
FSVHFILSITGVGAKAPKWLYPWVVYLPLIPVILTYIRRENIINSQQFEQVGIWIYPEFNSSYLITLTVGNIFHILIIGL
IFYALKRAERREHQRVLRMLFWTANVVLLWDVVFGYFQFRGFIPPYSYMYGGLVWAVALVIAMNRLDFLTSYVKRYGTLY
NLNPSAILLIDPDGKVESANPAARTLFHTVRVVNERFVDLLPEKKKAEWVEHYHQHVRTRKKFIEFETKIMTKSGQELYV
VIDGDFVDIDRTIHGMIIIRDVHSFKEAEQTIRFFAYHDPLTKLANRRAFYERADHALLSSSRLSLLIIDLDGFKAVNDT
YGHQIGDHFLTHLGGLLEASTRDVGLASRVGGDEFYIYLVDLTESEVRGFIHTLQMTLNQNPYQTSDVSIPIRASIGVSH
APDQGTNLDTLIHKADQAMYQIKQDGKNDYAIYDEALHGPK

Sequences:

>Translated_521_residues
MTEMFIYLAVYLLPSFLLGFLALDVFQRNPNKVEHRLLSLFVFGYSMLFLAEFVRHLSPIEYSPALIAYWFGNAGIFIFI
FSVHFILSITGVGAKAPKWLYPWVVYLPLIPVILTYIRRENIINSQQFEQVGIWIYPEFNSSYLITLTVGNIFHILIIGL
IFYALKRAERREHQRVLRMLFWTANVVLLWDVVFGYFQFRGFIPPYSYMYGGLVWAVALVIAMNRLDFLTSYVKRYGTLY
NLNPSAILLIDPDGKVESANPAARTLFHTVRVVNERFVDLLPEKKKAEWVEHYHQHVRTRKKFIEFETKIMTKSGQELYV
VIDGDFVDIDRTIHGMIIIRDVHSFKEAEQTIRFFAYHDPLTKLANRRAFYERADHALLSSSRLSLLIIDLDGFKAVNDT
YGHQIGDHFLTHLGGLLEASTRDVGLASRVGGDEFYIYLVDLTESEVRGFIHTLQMTLNQNPYQTSDVSIPIRASIGVSH
APDQGTNLDTLIHKADQAMYQIKQDGKNDYAIYDEALHGPK
>Mature_520_residues
TEMFIYLAVYLLPSFLLGFLALDVFQRNPNKVEHRLLSLFVFGYSMLFLAEFVRHLSPIEYSPALIAYWFGNAGIFIFIF
SVHFILSITGVGAKAPKWLYPWVVYLPLIPVILTYIRRENIINSQQFEQVGIWIYPEFNSSYLITLTVGNIFHILIIGLI
FYALKRAERREHQRVLRMLFWTANVVLLWDVVFGYFQFRGFIPPYSYMYGGLVWAVALVIAMNRLDFLTSYVKRYGTLYN
LNPSAILLIDPDGKVESANPAARTLFHTVRVVNERFVDLLPEKKKAEWVEHYHQHVRTRKKFIEFETKIMTKSGQELYVV
IDGDFVDIDRTIHGMIIIRDVHSFKEAEQTIRFFAYHDPLTKLANRRAFYERADHALLSSSRLSLLIIDLDGFKAVNDTY
GHQIGDHFLTHLGGLLEASTRDVGLASRVGGDEFYIYLVDLTESEVRGFIHTLQMTLNQNPYQTSDVSIPIRASIGVSHA
PDQGTNLDTLIHKADQAMYQIKQDGKNDYAIYDEALHGPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MHYT domain [H]

Homologues:

Organism=Escherichia coli, GI87082007, Length=186, Percent_Identity=34.9462365591398, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI1787541, Length=277, Percent_Identity=25.9927797833935, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI87081881, Length=284, Percent_Identity=28.169014084507, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1787262, Length=195, Percent_Identity=28.2051282051282, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1787816, Length=161, Percent_Identity=39.7515527950311, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1788381, Length=229, Percent_Identity=28.82096069869, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI87081977, Length=185, Percent_Identity=31.8918918918919, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI145693134, Length=178, Percent_Identity=32.0224719101124, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1786584, Length=179, Percent_Identity=26.8156424581006, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788956, Length=157, Percent_Identity=35.6687898089172, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1787802, Length=173, Percent_Identity=24.8554913294798, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1788085, Length=177, Percent_Identity=25.4237288135593, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1787056, Length=153, Percent_Identity=32.0261437908497, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]

EC number: NA

Molecular weight: Translated: 60122; Mature: 59991

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEMFIYLAVYLLPSFLLGFLALDVFQRNPNKVEHRLLSLFVFGYSMLFLAEFVRHLSPI
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EYSPALIAYWFGNAGIFIFIFSVHFILSITGVGAKAPKWLYPWVVYLPLIPVILTYIRRE
CCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NIINSQQFEQVGIWIYPEFNSSYLITLTVGNIFHILIIGLIFYALKRAERREHQRVLRML
CCCCCCHHHHCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FWTANVVLLWDVVFGYFQFRGFIPPYSYMYGGLVWAVALVIAMNRLDFLTSYVKRYGTLY
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
NLNPSAILLIDPDGKVESANPAARTLFHTVRVVNERFVDLLPEKKKAEWVEHYHQHVRTR
ECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
KKFIEFETKIMTKSGQELYVVIDGDFVDIDRTIHGMIIIRDVHSFKEAEQTIRFFAYHDP
HHHHHHHHHHHCCCCCEEEEEEECCEEEECCCCEEEEEEEEHHHHHHHHHHHHHHHCCCH
LTKLANRRAFYERADHALLSSSRLSLLIIDLDGFKAVNDTYGHQIGDHFLTHLGGLLEAS
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
TRDVGLASRVGGDEFYIYLVDLTESEVRGFIHTLQMTLNQNPYQTSDVSIPIRASIGVSH
CCCCCCHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCC
APDQGTNLDTLIHKADQAMYQIKQDGKNDYAIYDEALHGPK
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCC
>Mature Secondary Structure 
TEMFIYLAVYLLPSFLLGFLALDVFQRNPNKVEHRLLSLFVFGYSMLFLAEFVRHLSPI
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EYSPALIAYWFGNAGIFIFIFSVHFILSITGVGAKAPKWLYPWVVYLPLIPVILTYIRRE
CCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NIINSQQFEQVGIWIYPEFNSSYLITLTVGNIFHILIIGLIFYALKRAERREHQRVLRML
CCCCCCHHHHCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FWTANVVLLWDVVFGYFQFRGFIPPYSYMYGGLVWAVALVIAMNRLDFLTSYVKRYGTLY
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
NLNPSAILLIDPDGKVESANPAARTLFHTVRVVNERFVDLLPEKKKAEWVEHYHQHVRTR
ECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
KKFIEFETKIMTKSGQELYVVIDGDFVDIDRTIHGMIIIRDVHSFKEAEQTIRFFAYHDP
HHHHHHHHHHHCCCCCEEEEEEECCEEEECCCCEEEEEEEEHHHHHHHHHHHHHHHCCCH
LTKLANRRAFYERADHALLSSSRLSLLIIDLDGFKAVNDTYGHQIGDHFLTHLGGLLEAS
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
TRDVGLASRVGGDEFYIYLVDLTESEVRGFIHTLQMTLNQNPYQTSDVSIPIRASIGVSH
CCCCCCHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCC
APDQGTNLDTLIHKADQAMYQIKQDGKNDYAIYDEALHGPK
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]