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The map label for this gene is yvgT [H]

Identifier: 229917183

GI number: 229917183

Start: 1423901

End: 1424506

Strand: Reverse

Name: yvgT [H]

Synonym: EAT1b_1457

Alternate gene names: 229917183

Gene position: 1424506-1423901 (Counterclockwise)

Preceding gene: 229917185

Following gene: 229917182

Centisome position: 47.49

GC content: 49.5

Gene sequence:

>606_bases
ATGTTCATGGAGTGGGAATTGCTCAACGTCGTCGGAACGATTGCGTTCGCGGCGAGCGGAGCCATCATTGCGATGGATGA
AAAATACGATATTTTTGGGGTATGGCTATTGGCGTTTATCACTGCCTTCGGAGGTGGCGCGATCCGAAACGTCCTGTTAG
GAAACCCCGTCAGCTTAATTTGGCAACAGAATGATTTATTTATTTTATGTTTTCTTGTCGCACTCCTCATCTTCCTGCTC
CCGAGTGTCGTATTGCCACATTGGGAACGCTGGGGTGTCATTGTCGACGCCATTGGTCTCGTCGCGTTTGCCTTTCAAGG
GGCACAAGTCGCCATCAAGCTTGATTTACCTTTATCTGCTGCGATTGCGGCAGCTGTCTTGACCGGCGTTGGCGGAGGTG
TGGTTCGGGACTTATTGGCCGGACGCAAGCCTCTCGTCTTACAGTCTGAGGTGTATGCAATTTGGGCGATTCTCATTGCG
GTCATCACGTATTACTTCAAGCTCGAAGGCGGCCTTGCCGTCTATGCATTATTAATTGTCGTCGCGACACTTCGAGTGAT
ATCCTACTATCGGAAGTGGAATTTACCAGCACGTAAAGTTAGATAA

Upstream 100 bases:

>100_bases
GTTTCATTGTAATACCGACATCCTTTACGACAGTCGCACGACTGACCTGAATTTTTGTAACTATACTTTACCATACAATG
CGTTGAAGAAAGGGCAAGGG

Downstream 100 bases:

>100_bases
GGGGGAACGGAAATGAAGATCTTATTAATGATTGGTGCCGGATTGATGGCACTCGGCGTAGCACTCGGTGCGTTCGGCGC
CCATGCGCTAAAAGAGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MFMEWELLNVVGTIAFAASGAIIAMDEKYDIFGVWLLAFITAFGGGAIRNVLLGNPVSLIWQQNDLFILCFLVALLIFLL
PSVVLPHWERWGVIVDAIGLVAFAFQGAQVAIKLDLPLSAAIAAAVLTGVGGGVVRDLLAGRKPLVLQSEVYAIWAILIA
VITYYFKLEGGLAVYALLIVVATLRVISYYRKWNLPARKVR

Sequences:

>Translated_201_residues
MFMEWELLNVVGTIAFAASGAIIAMDEKYDIFGVWLLAFITAFGGGAIRNVLLGNPVSLIWQQNDLFILCFLVALLIFLL
PSVVLPHWERWGVIVDAIGLVAFAFQGAQVAIKLDLPLSAAIAAAVLTGVGGGVVRDLLAGRKPLVLQSEVYAIWAILIA
VITYYFKLEGGLAVYALLIVVATLRVISYYRKWNLPARKVR
>Mature_201_residues
MFMEWELLNVVGTIAFAASGAIIAMDEKYDIFGVWLLAFITAFGGGAIRNVLLGNPVSLIWQQNDLFILCFLVALLIFLL
PSVVLPHWERWGVIVDAIGLVAFAFQGAQVAIKLDLPLSAAIAAAVLTGVGGGVVRDLLAGRKPLVLQSEVYAIWAILIA
VITYYFKLEGGLAVYALLIVVATLRVISYYRKWNLPARKVR

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI87082304, Length=151, Percent_Identity=39.0728476821192, Blast_Score=100, Evalue=7e-23,
Organism=Escherichia coli, GI1786352, Length=204, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 21949; Mature: 21949

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMEWELLNVVGTIAFAASGAIIAMDEKYDIFGVWLLAFITAFGGGAIRNVLLGNPVSLI
CCCHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEE
WQQNDLFILCFLVALLIFLLPSVVLPHWERWGVIVDAIGLVAFAFQGAQVAIKLDLPLSA
EECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
AIAAAVLTGVGGGVVRDLLAGRKPLVLQSEVYAIWAILIAVITYYFKLEGGLAVYALLIV
HHHHHHHHCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VATLRVISYYRKWNLPARKVR
HHHHHHHHHHHHCCCCHHCCC
>Mature Secondary Structure
MFMEWELLNVVGTIAFAASGAIIAMDEKYDIFGVWLLAFITAFGGGAIRNVLLGNPVSLI
CCCHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEE
WQQNDLFILCFLVALLIFLLPSVVLPHWERWGVIVDAIGLVAFAFQGAQVAIKLDLPLSA
EECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
AIAAAVLTGVGGGVVRDLLAGRKPLVLQSEVYAIWAILIAVITYYFKLEGGLAVYALLIV
HHHHHHHHCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VATLRVISYYRKWNLPARKVR
HHHHHHHHHHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]