| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917173
Identifier: 229917173
GI number: 229917173
Start: 1412557
End: 1413495
Strand: Reverse
Name: 229917173
Synonym: EAT1b_1447
Alternate gene names: NA
Gene position: 1413495-1412557 (Counterclockwise)
Preceding gene: 229917175
Following gene: 229917170
Centisome position: 47.12
GC content: 50.27
Gene sequence:
>939_bases ATGTCTAAAATTCACGTCATTCATGAAAACGAAGAATGGACGAACCACCTTGTCCACCGTTTAAAAGAATTGAACTTGCC ATATGAATTGTGGCACTTGGACCAAGGGACGATTGATCTCGAAGCAATGCCCCCGGAAGGTGTCTTTTATAATCGGATGA GTGCCTCCTCGCACACACGTGGGCATCGGTACGCACCAGAATTGACGGAAGGCGTCCTCGCTTGGTTAGAGGCAAACGAC CGGACCGTGTTTAACGGCACACGTGCCATCCGCCTCGAAGTGAGTAAAGTCAATCAATACACGGCGCTTCGACGTGAAGG GATTCGCGTGCCGAAGACGATTGCGGCAGTCGGTAAGGCGCAAATCATCGATGCGGCTGAGCAGTTAGCTTTGACGCCAT TCATCACGAAACATAATCGTGCCGGAAAAGGACTTGGGGTCCAATTGTTCCATACGATCGAAGGACTCAAAGAATATGTA TATGGTCCCTCGTTCGAGGAATCGGTTGACGGCATCACGCTCATTCAACAGTATATCGAATCCCCAGAACCATATATTAC CCGCTGTGAATTCATCGGTGGGAAGTTCTTTTATGCGGTGCGTGTCGATACGTCGGAAGGATTCGAGCTCTGTCCGGCAG ATGCCTGCTCGATTGAAGACCAGTTCTGTCCGGTCGGGGAGACGCCACCGGCGAAGTTCGAAATCGTCGAAGGATTCGAT GACCCGATCATTCCAAAGCTCGAACAGTTCCTGAAAGCGAATGCGATCGATATTGCGGGGATTGAAATCATTCGAGACCG AGACGGAAACGTCTACGCCTATGACGTCAATACGAACACGAACTACAATTCCGATGCTGAAGCGAAAGCGGGACGCTACG GGATGCTTGAATTGGCTACGTTCTTAGGCGACGCACTTCACGTCACTACGACAAAATAA
Upstream 100 bases:
>100_bases CGTCTGATATTTCAGAATTGAGGATTAGGCAAACCATACACATTGGAATTGTCGGTTATGAATATGGTAAAGTAAACACA TCATAGAAGGAGGAATGATG
Downstream 100 bases:
>100_bases GGGTCAGGCGCTCGCCTGACCCTTTTGCTGTGTATGTTTGAGTTGCTCTTCAAATCGATGTTGGACTAATTCTGCTGTCG GTGCCATTCGTTCGATGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: RimK Domain Protein ATP-Grasp; Carboxylate-Amine/Thiol Ligase; Glutathione Synthase/Ribosomal Protein; Carbamoyl-Phosphate Synthase Large Chain
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MSKIHVIHENEEWTNHLVHRLKELNLPYELWHLDQGTIDLEAMPPEGVFYNRMSASSHTRGHRYAPELTEGVLAWLEAND RTVFNGTRAIRLEVSKVNQYTALRREGIRVPKTIAAVGKAQIIDAAEQLALTPFITKHNRAGKGLGVQLFHTIEGLKEYV YGPSFEESVDGITLIQQYIESPEPYITRCEFIGGKFFYAVRVDTSEGFELCPADACSIEDQFCPVGETPPAKFEIVEGFD DPIIPKLEQFLKANAIDIAGIEIIRDRDGNVYAYDVNTNTNYNSDAEAKAGRYGMLELATFLGDALHVTTTK
Sequences:
>Translated_312_residues MSKIHVIHENEEWTNHLVHRLKELNLPYELWHLDQGTIDLEAMPPEGVFYNRMSASSHTRGHRYAPELTEGVLAWLEAND RTVFNGTRAIRLEVSKVNQYTALRREGIRVPKTIAAVGKAQIIDAAEQLALTPFITKHNRAGKGLGVQLFHTIEGLKEYV YGPSFEESVDGITLIQQYIESPEPYITRCEFIGGKFFYAVRVDTSEGFELCPADACSIEDQFCPVGETPPAKFEIVEGFD DPIIPKLEQFLKANAIDIAGIEIIRDRDGNVYAYDVNTNTNYNSDAEAKAGRYGMLELATFLGDALHVTTTK >Mature_311_residues SKIHVIHENEEWTNHLVHRLKELNLPYELWHLDQGTIDLEAMPPEGVFYNRMSASSHTRGHRYAPELTEGVLAWLEANDR TVFNGTRAIRLEVSKVNQYTALRREGIRVPKTIAAVGKAQIIDAAEQLALTPFITKHNRAGKGLGVQLFHTIEGLKEYVY GPSFEESVDGITLIQQYIESPEPYITRCEFIGGKFFYAVRVDTSEGFELCPADACSIEDQFCPVGETPPAKFEIVEGFDD PIIPKLEQFLKANAIDIAGIEIIRDRDGNVYAYDVNTNTNYNSDAEAKAGRYGMLELATFLGDALHVTTTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35024; Mature: 34893
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIHVIHENEEWTNHLVHRLKELNLPYELWHLDQGTIDLEAMPPEGVFYNRMSASSHTR CCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCEEEECCCCCCCCC GHRYAPELTEGVLAWLEANDRTVFNGTRAIRLEVSKVNQYTALRREGIRVPKTIAAVGKA CCCCCHHHHHHHEEEEECCCEEEECCCEEEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHH QIIDAAEQLALTPFITKHNRAGKGLGVQLFHTIEGLKEYVYGPSFEESVDGITLIQQYIE HHHHHHHHHHHCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHH SPEPYITRCEFIGGKFFYAVRVDTSEGFELCPADACSIEDQFCPVGETPPAKFEIVEGFD CCCCCEEEEEEECCEEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEECCCC DPIIPKLEQFLKANAIDIAGIEIIRDRDGNVYAYDVNTNTNYNSDAEAKAGRYGMLELAT CCCHHHHHHHHHCCCEEEECEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHH FLGDALHVTTTK HHCCEEEEEECC >Mature Secondary Structure SKIHVIHENEEWTNHLVHRLKELNLPYELWHLDQGTIDLEAMPPEGVFYNRMSASSHTR CEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCEEEECCCCCCCCC GHRYAPELTEGVLAWLEANDRTVFNGTRAIRLEVSKVNQYTALRREGIRVPKTIAAVGKA CCCCCHHHHHHHEEEEECCCEEEECCCEEEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHH QIIDAAEQLALTPFITKHNRAGKGLGVQLFHTIEGLKEYVYGPSFEESVDGITLIQQYIE HHHHHHHHHHHCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHH SPEPYITRCEFIGGKFFYAVRVDTSEGFELCPADACSIEDQFCPVGETPPAKFEIVEGFD CCCCCEEEEEEECCEEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEECCCC DPIIPKLEQFLKANAIDIAGIEIIRDRDGNVYAYDVNTNTNYNSDAEAKAGRYGMLELAT CCCHHHHHHHHHCCCEEEECEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHH FLGDALHVTTTK HHCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA