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The map label for this gene is ytfH [C]

Identifier: 229917154

GI number: 229917154

Start: 1397143

End: 1397451

Strand: Direct

Name: ytfH [C]

Synonym: EAT1b_1428

Alternate gene names: 229917154

Gene position: 1397143-1397451 (Clockwise)

Preceding gene: 229917150

Following gene: 229917156

Centisome position: 46.57

GC content: 52.75

Gene sequence:

>309_bases
ATGACCACATCGTTCCCCGTCAACCGCGCACTCGAGATTATCGGCGGCAAATGGCGCCCCCAAGTGTATTGTACGCTTCA
AGATGGACCGCTTCGTTTTTCTGATATTCAACGGGCGATTCCTGACGTCAGCCGAAAAGTGTTGACCGACCAATTGCGTG
AACTCGAGCAGCTCGGCATGGTTCGCCGTGTCGACTATTCGACCGAGAAGCACCTCCATGTCGAGTATTCATTGACTGAA
GACGCCCTCGGCCTTCAGCCTGCCATGAATGCCCTTTGTTTATGGGGAGAGTGCCATGACAATCAATAA

Upstream 100 bases:

>100_bases
TGTTTGCTCAAATTAGCGGATAACGATAAGATACTGTCATTGAAGCAAGAAAAAAAGTACGCACATTGAAGTAACTACCC
GAAAGTGAGGCTCTTTGAAC

Downstream 100 bases:

>100_bases
TCCCGAGCCATATGGCCCGGGATTATTTTTATGAGGCGAATAAACTGATCAAATTCCCATCCGCATCGTACAGGATGGCG
TAACGTTGTCCCCAAAACGC

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MTTSFPVNRALEIIGGKWRPQVYCTLQDGPLRFSDIQRAIPDVSRKVLTDQLRELEQLGMVRRVDYSTEKHLHVEYSLTE
DALGLQPAMNALCLWGECHDNQ

Sequences:

>Translated_102_residues
MTTSFPVNRALEIIGGKWRPQVYCTLQDGPLRFSDIQRAIPDVSRKVLTDQLRELEQLGMVRRVDYSTEKHLHVEYSLTE
DALGLQPAMNALCLWGECHDNQ
>Mature_101_residues
TTSFPVNRALEIIGGKWRPQVYCTLQDGPLRFSDIQRAIPDVSRKVLTDQLRELEQLGMVRRVDYSTEKHLHVEYSLTED
ALGLQPAMNALCLWGECHDNQ

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 11715; Mature: 11583

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSFPVNRALEIIGGKWRPQVYCTLQDGPLRFSDIQRAIPDVSRKVLTDQLRELEQLGM
CCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCH
VRRVDYSTEKHLHVEYSLTEDALGLQPAMNALCLWGECHDNQ
HHHCCCCCCCEEEEEEECCCCCCCCCHHHHHEEEECCCCCCC
>Mature Secondary Structure 
TTSFPVNRALEIIGGKWRPQVYCTLQDGPLRFSDIQRAIPDVSRKVLTDQLRELEQLGM
CCCCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCH
VRRVDYSTEKHLHVEYSLTEDALGLQPAMNALCLWGECHDNQ
HHHCCCCCCCEEEEEEECCCCCCCCCHHHHHEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]