| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is nanE [H]
Identifier: 229917011
GI number: 229917011
Start: 1262140
End: 1262835
Strand: Reverse
Name: nanE [H]
Synonym: EAT1b_1285
Alternate gene names: 229917011
Gene position: 1262835-1262140 (Counterclockwise)
Preceding gene: 229917012
Following gene: 229917010
Centisome position: 42.1
GC content: 48.99
Gene sequence:
>696_bases ATGATAACGTTACCGACTGGATTGATTGTTTCGTGCCAGGCTTTAGAAGGTGAACCGCTCCATAGTGAATTCATTATGGG ACGGATGGCTATTGCGGCCGTTCAAGGTGGCGCCAAAGGAATTCGAGCCAATTCAGCGAGGGATATTCAAGAGATAAAAA AACACGTGACTGTTCCGATTATTGGTATCGTCAAACGTGACTATGAAGATAGTGACGTGTTCATCACAGCGACCATGAAA GAGATTGAGGAATTGATGGAAGTCGGTGTGGACGCCATCGCGCTCGACGCGACAAAGCGTCCTCGTCCGGGAAACCTGTC ACTCCAAGAACTGGTTCACGCTATCCGCTCGATTTATCCGAATCAATTGTTGATGGCTGATTGCGCGACCCTCGAGGACT GCATTGAGGCGGATCGCCTTGGTTTCGACTATATCTCGACAACTTTGCACGGATATACAGACGAAACGAAAGGATCTCTT CTCTACCATGATGATTTCAAGTTTTTAAAAGATGTGTTAGATCACGTGACACAGCCGGTCGTGGCCGAGGGGAATATTTT GACACCTGAGATGGCAAAGCGTTGTATGGATTTAGGAACGCACGCGGTCGTTGTAGGGGGAGCCATCACCCGTCCGCATC AAATCACGGCACGATTCGATGCAGCGCTCACTTCGAGTGTGAAGAGTCCGCTGTAA
Upstream 100 bases:
>100_bases TGACGAAGACATTGATGGAGACGAATGAAGCATTAAAAGCGCATTATCTACAAACACTTAAAGCACTTGATCGTTTAAAA GAAAGAAGTGAATAACTATT
Downstream 100 bases:
>100_bases GAATGAATCAATCAGGACGCTATTCAATACCTCACGACGCGATGAACGTCGTGAGGTATTTTTTATATATCGGTACAGGG AAAGACCAAACTGTTCGATA
Product: N-acylglucosamine-6-phosphate 2-epimerase
Products: NA
Alternate protein names: ManNAc-6-P epimerase [H]
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MITLPTGLIVSCQALEGEPLHSEFIMGRMAIAAVQGGAKGIRANSARDIQEIKKHVTVPIIGIVKRDYEDSDVFITATMK EIEELMEVGVDAIALDATKRPRPGNLSLQELVHAIRSIYPNQLLMADCATLEDCIEADRLGFDYISTTLHGYTDETKGSL LYHDDFKFLKDVLDHVTQPVVAEGNILTPEMAKRCMDLGTHAVVVGGAITRPHQITARFDAALTSSVKSPL
Sequences:
>Translated_231_residues MITLPTGLIVSCQALEGEPLHSEFIMGRMAIAAVQGGAKGIRANSARDIQEIKKHVTVPIIGIVKRDYEDSDVFITATMK EIEELMEVGVDAIALDATKRPRPGNLSLQELVHAIRSIYPNQLLMADCATLEDCIEADRLGFDYISTTLHGYTDETKGSL LYHDDFKFLKDVLDHVTQPVVAEGNILTPEMAKRCMDLGTHAVVVGGAITRPHQITARFDAALTSSVKSPL >Mature_231_residues MITLPTGLIVSCQALEGEPLHSEFIMGRMAIAAVQGGAKGIRANSARDIQEIKKHVTVPIIGIVKRDYEDSDVFITATMK EIEELMEVGVDAIALDATKRPRPGNLSLQELVHAIRSIYPNQLLMADCATLEDCIEADRLGFDYISTTLHGYTDETKGSL LYHDDFKFLKDVLDHVTQPVVAEGNILTPEMAKRCMDLGTHAVVVGGAITRPHQITARFDAALTSSVKSPL
Specific function: Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P) (Potential) [H]
COG id: COG3010
COG function: function code G; Putative N-acetylmannosamine-6-phosphate epimerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nanE family [H]
Homologues:
Organism=Escherichia coli, GI1789617, Length=222, Percent_Identity=41.4414414414414, Blast_Score=129, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR007260 - InterPro: IPR011060 [H]
Pfam domain/function: PF04131 NanE [H]
EC number: =5.1.3.9 [H]
Molecular weight: Translated: 25213; Mature: 25213
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLPTGLIVSCQALEGEPLHSEFIMGRMAIAAVQGGAKGIRANSARDIQEIKKHVTVPI CEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCE IGIVKRDYEDSDVFITATMKEIEELMEVGVDAIALDATKRPRPGNLSLQELVHAIRSIYP EEEEECCCCCCCEEEEEHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCC NQLLMADCATLEDCIEADRLGFDYISTTLHGYTDETKGSLLYHDDFKFLKDVLDHVTQPV CHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCE VAEGNILTPEMAKRCMDLGTHAVVVGGAITRPHQITARFDAALTSSVKSPL ECCCCEECHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MITLPTGLIVSCQALEGEPLHSEFIMGRMAIAAVQGGAKGIRANSARDIQEIKKHVTVPI CEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCE IGIVKRDYEDSDVFITATMKEIEELMEVGVDAIALDATKRPRPGNLSLQELVHAIRSIYP EEEEECCCCCCCEEEEEHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCC NQLLMADCATLEDCIEADRLGFDYISTTLHGYTDETKGSLLYHDDFKFLKDVLDHVTQPV CHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCE VAEGNILTPEMAKRCMDLGTHAVVVGGAITRPHQITARFDAALTSSVKSPL ECCCCEECHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA