| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yvdM [H]
Identifier: 229916993
GI number: 229916993
Start: 1242385
End: 1243035
Strand: Reverse
Name: yvdM [H]
Synonym: EAT1b_1267
Alternate gene names: 229916993
Gene position: 1243035-1242385 (Counterclockwise)
Preceding gene: 229916994
Following gene: 229916992
Centisome position: 41.44
GC content: 44.85
Gene sequence:
>651_bases ATGAAAGCTTTTATTTTTGATTTAGACGGTGTCATCACCGACACTGCCGAATATCATTACTTAGCATGGAAAGCGCTCGG AGAAGATTTGGGGATTCCGTTTGATCGAGCATTCAATGAGACACTCAAAGGTGTGAGTCGAACTGAATCATTGGAACGAA TCTTACGACTTGGCGGCCGTGAGAATGACTTTTCTGCTGAAGAGAAGGAACTGCTTGCGATCAAGAAGAATGAACACTAT GTATCATTTATTTCAAAAATCACGGATGCAGATATCCTGCCGGGCATTGAAGTGTTCTTGAAAGAGCTAAAAGAAGCGGG TTACAAAATCGGAATGGCGTCAGCCTCGAAGAATGCTCAGACGGTGACGAGCCAACTTGGATTGCTTGAAGCGTTCGACC ATATTGTTGATGCGGCAACTGTGATACATTCAAAACCGCATCCTGAAGTATTTCTTAAAGCTGCTGAAGCGCTACGAGTC GATCCGAAAGAATGTGTCGGTATTGAAGATGCAGTTGCGGGAATCACGGCCATCCATGAGGCAGGTATGTTTGCCGTCGG AATTGGCGACCCGAATGTCTTGACTGAGGCAGATATTGTCTTCGAAAACACAGCGCGTCTCACATTAGAGAAGCTATTGG TTCGAATTTAA
Upstream 100 bases:
>100_bases CTGTCGTCAGTATCATCCCAATCATCATTTTGTACATCATGCTGAATAAGTACTTCATGCAAGGTTTACGAATTGGTGGA GATAAATAAGGAGAATGAAA
Downstream 100 bases:
>100_bases AAACGAAGCCTCGAGTGTTAACGCTCGAGGCATTTTTAATGAGGGGGAGTCGGAATGAAACGGACATGGTGGAAAGAGGC CGTCGTATATCAAGTGTATT
Product: beta-phosphoglucomutase
Products: NA
Alternate protein names: Beta-PGM [H]
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MKAFIFDLDGVITDTAEYHYLAWKALGEDLGIPFDRAFNETLKGVSRTESLERILRLGGRENDFSAEEKELLAIKKNEHY VSFISKITDADILPGIEVFLKELKEAGYKIGMASASKNAQTVTSQLGLLEAFDHIVDAATVIHSKPHPEVFLKAAEALRV DPKECVGIEDAVAGITAIHEAGMFAVGIGDPNVLTEADIVFENTARLTLEKLLVRI
Sequences:
>Translated_216_residues MKAFIFDLDGVITDTAEYHYLAWKALGEDLGIPFDRAFNETLKGVSRTESLERILRLGGRENDFSAEEKELLAIKKNEHY VSFISKITDADILPGIEVFLKELKEAGYKIGMASASKNAQTVTSQLGLLEAFDHIVDAATVIHSKPHPEVFLKAAEALRV DPKECVGIEDAVAGITAIHEAGMFAVGIGDPNVLTEADIVFENTARLTLEKLLVRI >Mature_216_residues MKAFIFDLDGVITDTAEYHYLAWKALGEDLGIPFDRAFNETLKGVSRTESLERILRLGGRENDFSAEEKELLAIKKNEHY VSFISKITDADILPGIEVFLKELKEAGYKIGMASASKNAQTVTSQLGLLEAFDHIVDAATVIHSKPHPEVFLKAAEALRV DPKECVGIEDAVAGITAIHEAGMFAVGIGDPNVLTEADIVFENTARLTLEKLLVRI
Specific function: Reversible transformation of glucose 6-phosphate and beta-glucose 1-phosphate [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1787576, Length=212, Percent_Identity=46.6981132075472, Blast_Score=193, Evalue=7e-51, Organism=Escherichia coli, GI1789046, Length=185, Percent_Identity=32.972972972973, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1788021, Length=239, Percent_Identity=28.8702928870293, Blast_Score=78, Evalue=4e-16, Organism=Escherichia coli, GI87082080, Length=217, Percent_Identity=29.0322580645161, Blast_Score=63, Evalue=2e-11, Organism=Drosophila melanogaster, GI17137324, Length=200, Percent_Identity=28.5, Blast_Score=68, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010976 - InterPro: IPR010972 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =5.4.2.6 [H]
Molecular weight: Translated: 23699; Mature: 23699
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAFIFDLDGVITDTAEYHYLAWKALGEDLGIPFDRAFNETLKGVSRTESLERILRLGGR CCEEEEECCCCEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC ENDFSAEEKELLAIKKNEHYVSFISKITDADILPGIEVFLKELKEAGYKIGMASASKNAQ CCCCCCCHHHHEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCHH TVTSQLGLLEAFDHIVDAATVIHSKPHPEVFLKAAEALRVDPKECVGIEDAVAGITAIHE HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHH AGMFAVGIGDPNVLTEADIVFENTARLTLEKLLVRI CCEEEEECCCCCCCCCHHHEECCHHHHHHHHHHHCC >Mature Secondary Structure MKAFIFDLDGVITDTAEYHYLAWKALGEDLGIPFDRAFNETLKGVSRTESLERILRLGGR CCEEEEECCCCEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC ENDFSAEEKELLAIKKNEHYVSFISKITDADILPGIEVFLKELKEAGYKIGMASASKNAQ CCCCCCCHHHHEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCHH TVTSQLGLLEAFDHIVDAATVIHSKPHPEVFLKAAEALRVDPKECVGIEDAVAGITAIHE HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHH AGMFAVGIGDPNVLTEADIVFENTARLTLEKLLVRI CCEEEEECCCCCCCCCHHHEECCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]