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The map label for this gene is yybA [H]

Identifier: 229916965

GI number: 229916965

Start: 1215025

End: 1215477

Strand: Reverse

Name: yybA [H]

Synonym: EAT1b_1239

Alternate gene names: 229916965

Gene position: 1215477-1215025 (Counterclockwise)

Preceding gene: 229916968

Following gene: 229916964

Centisome position: 40.52

GC content: 46.36

Gene sequence:

>453_bases
ATGCATGACCATTTACGAGAAATCGGGATGATTGCGCGTGCCCTCGATTCAATCAGCAACATTGAATTTAAGGCACTCGG
TTTAGAAAAAGGGAAGTACTTGTACGTCGTTAGGATTTTTGAACACCCAGGTATCATTCAAGAGCGGCTGGCAGAGTTGA
TTAAGGTAGATCGGACGACCGCCGCACGTGCCATCAAGAAACTGCAGCAAGAGGGATGGATTGAGAGACGGTCAGATTTA
GAGAACCAGAAAATCAAACGGTTATACGTGACGCAGAAGGGCGAGGCATTGTACCCGCTCATCATTCGGGAACATGAATA
TTCTACATCGGTCGCGTTATCAGGACTCGACGAGCAAGAAAGTGAAGAGTTGTTACGCCTCTTGAAAAAAGTACGAAGCA
ATGTGGAGATAGATTGGGCCGAAGTGAAGAAAGGCAAGCATCGAGAATACTGA

Upstream 100 bases:

>100_bases
TTCTTAGCGAAAATTCTTACTTCCATTCTCTCACAAATTACGATACGCTTATATAAAGTATTTTGTTGCATTTGCAACAA
AGGGATAGAGGTGTCTCATA

Downstream 100 bases:

>100_bases
GAGGAGCGAGACCACATGATTGAAATCTCGAAGGTGACAGACGTAGAAGCCTTACGTCACATTAGCATCCAGACATTTAC
GGAGACGTTCGCACGTCACA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MHDHLREIGMIARALDSISNIEFKALGLEKGKYLYVVRIFEHPGIIQERLAELIKVDRTTAARAIKKLQQEGWIERRSDL
ENQKIKRLYVTQKGEALYPLIIREHEYSTSVALSGLDEQESEELLRLLKKVRSNVEIDWAEVKKGKHREY

Sequences:

>Translated_150_residues
MHDHLREIGMIARALDSISNIEFKALGLEKGKYLYVVRIFEHPGIIQERLAELIKVDRTTAARAIKKLQQEGWIERRSDL
ENQKIKRLYVTQKGEALYPLIIREHEYSTSVALSGLDEQESEELLRLLKKVRSNVEIDWAEVKKGKHREY
>Mature_150_residues
MHDHLREIGMIARALDSISNIEFKALGLEKGKYLYVVRIFEHPGIIQERLAELIKVDRTTAARAIKKLQQEGWIERRSDL
ENQKIKRLYVTQKGEALYPLIIREHEYSTSVALSGLDEQESEELLRLLKKVRSNVEIDWAEVKKGKHREY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17569; Mature: 17569

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDHLREIGMIARALDSISNIEFKALGLEKGKYLYVVRIFEHPGIIQERLAELIKVDRTT
CCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHCCHH
AARAIKKLQQEGWIERRSDLENQKIKRLYVTQKGEALYPLIIREHEYSTSVALSGLDEQE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCCEEEHEEEECCCCCHHHHCCCCCCHH
SEELLRLLKKVRSNVEIDWAEVKKGKHREY
HHHHHHHHHHHHCCCCCCHHHHCCCCCCCC
>Mature Secondary Structure
MHDHLREIGMIARALDSISNIEFKALGLEKGKYLYVVRIFEHPGIIQERLAELIKVDRTT
CCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHCCHH
AARAIKKLQQEGWIERRSDLENQKIKRLYVTQKGEALYPLIIREHEYSTSVALSGLDEQE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCCEEEHEEEECCCCCHHHHCCCCCCHH
SEELLRLLKKVRSNVEIDWAEVKKGKHREY
HHHHHHHHHHHHCCCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]