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The map label for this gene is paiB [H]

Identifier: 229916962

GI number: 229916962

Start: 1213171

End: 1213764

Strand: Reverse

Name: paiB [H]

Synonym: EAT1b_1236

Alternate gene names: 229916962

Gene position: 1213764-1213171 (Counterclockwise)

Preceding gene: 229916964

Following gene: 229916961

Centisome position: 40.46

GC content: 49.83

Gene sequence:

>594_bases
ATGTATATTCCAAATCAATATTCCGTCAAAGAACGAGCTGAGATTTACGCGTTTCTCCATGCCCATCCGTTCGGTACGAT
CGTGACGCATGATGGGGACAAACCGATTGCGACACATGTCCCGTTACGATTCGATGAGGCGAACAGTCAACTGACGACGC
ATATTGCGAAAGCGAATCCGCAGTGGCGAACGATTGAAAATCAAACCGTTCTCGTCATGTTTCAAGGACCAAACGCTTAC
GTGTCGGCGTCCTGGTACGGCCATGAGGACGTCTCGACATGGAACTACCAAGCCGTACACGTGTACGGACGTGCGATGAT
TCTCAATGAGAAAGAATTAGTGGAGGAACTCGCAGGATTGCTCCATGAGTATGAAGGGGAACGCGAGCATGCGGTACGTT
GGGAGACATTATCGGAACCAGTGAAGCGACAAATGAACGGCGTCGTCGGGTTTCGGATCGACATCACCGATATGCAGGCG
ACGTTCAAATTAAGTCAAAACCGAAACGACGTGGACCATGAACGGATCGTTTCGGAGCTTGAAAAACAAGATGAACCGAT
TGCTGACGTCATGCGACGGCATCGAAAGTCCTAA

Upstream 100 bases:

>100_bases
AAAGACGATGGCTTTGATAGGTTGTTTCATAAAAACATTCCTCCTTCTGTGTCGTTATACCCGACTTGATCAGAATATAA
TAGGAGAAAGGGGGTACAGC

Downstream 100 bases:

>100_bases
GCAACCTGTCCTAAAACGGCAGGTTTTTTCATATTTCTTTACCGAATAGCGGTTGACATGACTTAAGAGCAGGTCTATAC
TCATAACTGATAATGATTAT

Product: FMN-binding negative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MYIPNQYSVKERAEIYAFLHAHPFGTIVTHDGDKPIATHVPLRFDEANSQLTTHIAKANPQWRTIENQTVLVMFQGPNAY
VSASWYGHEDVSTWNYQAVHVYGRAMILNEKELVEELAGLLHEYEGEREHAVRWETLSEPVKRQMNGVVGFRIDITDMQA
TFKLSQNRNDVDHERIVSELEKQDEPIADVMRRHRKS

Sequences:

>Translated_197_residues
MYIPNQYSVKERAEIYAFLHAHPFGTIVTHDGDKPIATHVPLRFDEANSQLTTHIAKANPQWRTIENQTVLVMFQGPNAY
VSASWYGHEDVSTWNYQAVHVYGRAMILNEKELVEELAGLLHEYEGEREHAVRWETLSEPVKRQMNGVVGFRIDITDMQA
TFKLSQNRNDVDHERIVSELEKQDEPIADVMRRHRKS
>Mature_197_residues
MYIPNQYSVKERAEIYAFLHAHPFGTIVTHDGDKPIATHVPLRFDEANSQLTTHIAKANPQWRTIENQTVLVMFQGPNAY
VSASWYGHEDVSTWNYQAVHVYGRAMILNEKELVEELAGLLHEYEGEREHAVRWETLSEPVKRQMNGVVGFRIDITDMQA
TFKLSQNRNDVDHERIVSELEKQDEPIADVMRRHRKS

Specific function: Involved in the reduction of extracellular and cell- associated protease levels, as well as in the reduced levels of alpha-amylase, levansucrase, alkaline phosphatase and sporulation inhibition, when present in high copy number [H]

COG id: COG2808

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the paiB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007396
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF04299 FMN_bind_2 [H]

EC number: NA

Molecular weight: Translated: 22870; Mature: 22870

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIPNQYSVKERAEIYAFLHAHPFGTIVTHDGDKPIATHVPLRFDEANSQLTTHIAKANP
CCCCCCCCHHHHHHEEEEEECCCCEEEEEECCCCCCEEECCEEECCCCCHHHHHHHCCCC
QWRTIENQTVLVMFQGPNAYVSASWYGHEDVSTWNYQAVHVYGRAMILNEKELVEELAGL
CEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCEEEEEEEEEEEEECHHHHHHHHHHH
LHEYEGEREHAVRWETLSEPVKRQMNGVVGFRIDITDMQATFKLSQNRNDVDHERIVSEL
HHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCEEEEEECCCCCCCCHHHHHHHH
EKQDEPIADVMRRHRKS
HHCCCCHHHHHHHHCCC
>Mature Secondary Structure
MYIPNQYSVKERAEIYAFLHAHPFGTIVTHDGDKPIATHVPLRFDEANSQLTTHIAKANP
CCCCCCCCHHHHHHEEEEEECCCCEEEEEECCCCCCEEECCEEECCCCCHHHHHHHCCCC
QWRTIENQTVLVMFQGPNAYVSASWYGHEDVSTWNYQAVHVYGRAMILNEKELVEELAGL
CEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCEEEEEEEEEEEEECHHHHHHHHHHH
LHEYEGEREHAVRWETLSEPVKRQMNGVVGFRIDITDMQATFKLSQNRNDVDHERIVSEL
HHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCEEEEEECCCCCCCCHHHHHHHH
EKQDEPIADVMRRHRKS
HHCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108124; 9384377 [H]