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The map label for this gene is capD [H]

Identifier: 229916918

GI number: 229916918

Start: 1162322

End: 1163365

Strand: Reverse

Name: capD [H]

Synonym: EAT1b_1191

Alternate gene names: 229916918

Gene position: 1163365-1162322 (Counterclockwise)

Preceding gene: 229916919

Following gene: 229916917

Centisome position: 38.78

GC content: 52.68

Gene sequence:

>1044_bases
ATGTTTTCCAACAAAACATTGCTCATCACGGGTGGGACGGGATCGTTCGGCAATGCCGTGATGGAGCGATTCCTCGATAC
GAACATCAAAGAGATTCGCATCTTTTCACGGGATGAGAAGAAACAAGAAGACATTCGCAATCGCTATCATCATGACAAGT
TAAAATTCTACATTGGTGATGTAAGGGACCCGAACAGTGTCAAAAATGCCATGTATGGCGTCGATTACGTCTTCCATGCG
GCGGCACTGAAACAAGTTCCCTCGTGTGAGTTTTTCCCGATCGAAGCGGTGAAGACGAATATTCTCGGTACGGAAAACGT
CTTGAATGCCGCTGTCGAAGCGGGTGTGGAGAAGGTCATCTGTCTCTCGACGGATAAGGCGGCCTACCCGATCAATGCGA
TGGGAATCTCCAAAGCGATGATGGAAAAAGTCTTCGTCGCCAAGGCCCGTGCGGTCGGACCAGACCGCACGCTCATCTGC
GGGACCCGTTATGGGAACGTGATGGCCTCGCGTGGGTCGGTCATTCCATTATTCGTGGAACAGATTAAAAAAGGGGAACC
GCTCACCGTGACCGATCCGCTCATGACGCGTTTCTTGATGAGCCTGGCCGATGCGGTCGAGCTCGTCGTCTTCGCATTCC
ATCATGCGCATGCCGGTGACATCATGGTCCAAAAATCACCTGCCTCGACGATTGGTGTACTCGCCGAAGCCGTGAAGCAA
CTGTTCGGGGTCGATCTTCCCATCAAAGTCATCGGGACCCGCCACGGCGAGAAAGCGTTCGAGACGTTGATGACCCGGGA
AGAGAAAGTCGTCTCCGAAGACATGGGGGGATTCTTCCGCGTCCCGGCCGACAATCGAGACTTGAACTACGAGAAGTACT
TCAGTGAAGGTAGCCAGGAGCTGACGGCTCAAGGTGAGTACAACTCGAACAATACGAGACAGCTCGATGTGGAGGAAGTG
AAGGAACTCTTGTTGACGTTACCTTACATCCAGGAAGAACTCGCGAAATGGACGATTCCCGCTTCCGCGAAACGAATCGG
GTGA

Upstream 100 bases:

>100_bases
TTTCCATTAAGTTACCAATTTAAGTGAGACCAACCGGGTAAATGATGACATACCGCTCTTCCTACATCTGAGACTAGACA
TCTACGAAAGGAGCCTTCTT

Downstream 100 bases:

>100_bases
GTGTGATGACCAGACAACGGCTCGTCTTCCTATCCAATATCGCTTCCCCGTATCAAGTGAAATTCGCTGACGTGCTTCAT
GAGCATATGGACACCGAGTT

Product: UDP-glucose 4-epimerase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MFSNKTLLITGGTGSFGNAVMERFLDTNIKEIRIFSRDEKKQEDIRNRYHHDKLKFYIGDVRDPNSVKNAMYGVDYVFHA
AALKQVPSCEFFPIEAVKTNILGTENVLNAAVEAGVEKVICLSTDKAAYPINAMGISKAMMEKVFVAKARAVGPDRTLIC
GTRYGNVMASRGSVIPLFVEQIKKGEPLTVTDPLMTRFLMSLADAVELVVFAFHHAHAGDIMVQKSPASTIGVLAEAVKQ
LFGVDLPIKVIGTRHGEKAFETLMTREEKVVSEDMGGFFRVPADNRDLNYEKYFSEGSQELTAQGEYNSNNTRQLDVEEV
KELLLTLPYIQEELAKWTIPASAKRIG

Sequences:

>Translated_347_residues
MFSNKTLLITGGTGSFGNAVMERFLDTNIKEIRIFSRDEKKQEDIRNRYHHDKLKFYIGDVRDPNSVKNAMYGVDYVFHA
AALKQVPSCEFFPIEAVKTNILGTENVLNAAVEAGVEKVICLSTDKAAYPINAMGISKAMMEKVFVAKARAVGPDRTLIC
GTRYGNVMASRGSVIPLFVEQIKKGEPLTVTDPLMTRFLMSLADAVELVVFAFHHAHAGDIMVQKSPASTIGVLAEAVKQ
LFGVDLPIKVIGTRHGEKAFETLMTREEKVVSEDMGGFFRVPADNRDLNYEKYFSEGSQELTAQGEYNSNNTRQLDVEEV
KELLLTLPYIQEELAKWTIPASAKRIG
>Mature_347_residues
MFSNKTLLITGGTGSFGNAVMERFLDTNIKEIRIFSRDEKKQEDIRNRYHHDKLKFYIGDVRDPNSVKNAMYGVDYVFHA
AALKQVPSCEFFPIEAVKTNILGTENVLNAAVEAGVEKVICLSTDKAAYPINAMGISKAMMEKVFVAKARAVGPDRTLIC
GTRYGNVMASRGSVIPLFVEQIKKGEPLTVTDPLMTRFLMSLADAVELVVFAFHHAHAGDIMVQKSPASTIGVLAEAVKQ
LFGVDLPIKVIGTRHGEKAFETLMTREEKVVSEDMGGFFRVPADNRDLNYEKYFSEGSQELTAQGEYNSNNTRQLDVEEV
KELLLTLPYIQEELAKWTIPASAKRIG

Specific function: Epimerizes UDP-galactose to UDP-glucose [H]

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869
- InterPro:   IPR013692 [H]

Pfam domain/function: PF08485 Polysacc_syn_2C; PF02719 Polysacc_synt_2 [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 38582; Mature: 38582

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSNKTLLITGGTGSFGNAVMERFLDTNIKEIRIFSRDEKKQEDIRNRYHHDKLKFYIGD
CCCCCEEEEECCCCCHHHHHHHHHHHCCHHEEEEECCCHHHHHHHHHHHCCCCEEEEECC
VRDPNSVKNAMYGVDYVFHAAALKQVPSCEFFPIEAVKTNILGTENVLNAAVEAGVEKVI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCHHHHHHHHHHHCCCEEE
CLSTDKAAYPINAMGISKAMMEKVFVAKARAVGPDRTLICGTRYGNVMASRGSVIPLFVE
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEECCCCCCHHHHHH
QIKKGEPLTVTDPLMTRFLMSLADAVELVVFAFHHAHAGDIMVQKSPASTIGVLAEAVKQ
HHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHH
LFGVDLPIKVIGTRHGEKAFETLMTREEKVVSEDMGGFFRVPADNRDLNYEKYFSEGSQE
HHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHCCCCHH
LTAQGEYNSNNTRQLDVEEVKELLLTLPYIQEELAKWTIPASAKRIG
EEECCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MFSNKTLLITGGTGSFGNAVMERFLDTNIKEIRIFSRDEKKQEDIRNRYHHDKLKFYIGD
CCCCCEEEEECCCCCHHHHHHHHHHHCCHHEEEEECCCHHHHHHHHHHHCCCCEEEEECC
VRDPNSVKNAMYGVDYVFHAAALKQVPSCEFFPIEAVKTNILGTENVLNAAVEAGVEKVI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCHHHHHHHHHHHCCCEEE
CLSTDKAAYPINAMGISKAMMEKVFVAKARAVGPDRTLICGTRYGNVMASRGSVIPLFVE
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEECCCCCCHHHHHH
QIKKGEPLTVTDPLMTRFLMSLADAVELVVFAFHHAHAGDIMVQKSPASTIGVLAEAVKQ
HHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHH
LFGVDLPIKVIGTRHGEKAFETLMTREEKVVSEDMGGFFRVPADNRDLNYEKYFSEGSQE
HHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHCCCCHH
LTAQGEYNSNNTRQLDVEEVKELLLTLPYIQEELAKWTIPASAKRIG
EEECCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA