| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916886
Identifier: 229916886
GI number: 229916886
Start: 1128532
End: 1131261
Strand: Reverse
Name: 229916886
Synonym: EAT1b_1159
Alternate gene names: NA
Gene position: 1131261-1128532 (Counterclockwise)
Preceding gene: 229916887
Following gene: 229916885
Centisome position: 37.71
GC content: 48.28
Gene sequence:
>2730_bases TTGAAACGATATTTATATACCATCACGCTGATGATGTTGTTGCTTATGGTGCCAAGGCAGGAGGCGTGGGCTGCTTCTGT CATCGAGGTCGGGACGAAACTTGAAGAAACGATTAAAGTGATCCCGCGATCACCATTTTATTTAGATTATCAGGACGGGA AGACGCGACTCCATGACCCGAGCAATCAGTCCACCGTCGTCATCGATTTTCCCGGAAACTTAACGACGCATTCATCTGGT GACGAGGGGAGCTACGGAGGCGTCCGTTCGTGGATTGCGAGTCTAGACAGACAGGAATGGATTGCCGTTCCCCAATATGA TCAACCCCTCATCCGTGTCCAGCGAGACGGGACGACGTCTCGAATCGACTCCTTGGAATCACCACATCGGGCGGATCTCG TATCATATGATGCTAGCCGAGACGTGATGCTCTGGCGTGATTCGTACAAAAACGAGTGGGCGTTGACGGATCTGAAAGGA ACGGTCAAAAGGACGTACCCGCTCATTTCAGGACAACGTCTCATATTAGGGACGAACCTTGATGAATTGATTGCATTCAA TACGTCCGACAAGTCAATCACACACCTCTCACTCGAGACGGGAGAGGAACTAGGAAAAACGACGTTTCCAAATGAATCGT TATCCATCGATTTTGAGTCGAAGACCGATCGACTCTTCATGAAAGGCTCTAATCATTTATACGTCTACGATTTCGCAACC CGAACGATTCAAACACTCAATTTGAACAGGCAGATTCATTATGATATCACGTCACTGGTCTATCACGATGGGCTCTACTA TGGTGTGACGTTTGATGATTCGATGGTCACGATTGATTTAACGGAAAATCGCATCACGGAGACGAGCTTGCGCACGCGCA ACACGAATAGCGAGTTCGATTTAATCGAGAATGGATACTTCGTACAAGACGACCAGTGGTTGTTGCCAATTGAACGTTTC GGGCAAAAGCCGAAAGAAATGTATACGTGGTTAAAAGCTACTGGCAACTCGGAAGAAGGGCATACGTGGCTGAATCATGC GTATCAACTCATGGCGACCATCACAACCGTTAATGGGACCGAACATAAGGTGCCTGTTGCCGAATTGCCGACGGATGTGA CACAAGTCGAGTCGGCACAACCGTTCGCAGAAGGCTATACGATTCCATCATTTGATCAATTGTTCTCCGCTAAGGTCAGC TTCGCCATGTTGGACCATTGGAAATCTTACAAACCGGTCAAACAACTTCCACTTCAAATCGACACCTCGTTCGAATACGG AGCAGTCGGTGAGATTACCGGAATGACAGCACCGAATGCGACCGTATATCTTTCGTGTGAAAAAGCGTCGTTTGCTACGT GTTCGAGTCCCGTTCAAGCAGACGAGACAGGGCGCTTCACGCTCTCGAGTGGAATCATTGAAGGAAATCAAACAATCGAG CTATATGTTTCTGATGCGTGGGATTACCGTCAAGCAACGGAAGCGTCTGTCAAAAAGAAATTTATACTTGGACAACCGGT AATCAATAATCCGACAAAAGTTCTGACAGACACTCGAATAGAAGGGGTCTCTATCCAGACAGAACCTCACGCAAAAGTGG AAGTAAGACAATTAAATTCGAAAACAGCATTTGAAGTGAGAGAAGTTCAAGCGGATGAACATGGTGTGGCGCAATTGACG ACATACCGTTCTGATCAACCTTGGTCATACCGAATCTTTTTCCGTGTCCTTGGACAAGAACGTCCTTACGAGATGGTCTA CGTCACGAAAGACTATCCAATGCCATCTTTCACGTGGACAAAACTACCGAAAACAGGTGACACGACAATCACTGTCTATA ATGACAAGTTAGACCCGATGCTCGCTGTTTCACGCAACGGAAGAGCTGAGTCAGCGAAACGCCTGACAAAAGGTCTCAAC GTCATCACTTTGAAAGAACCGCTTCGCGAAGGCCAGACGATCAAACTCGTTGCGAGTTTTCGTCCTGAACTTACTCAAAC GTTAGAGAAAAAAGTGACAAGTGACACACCGAAAGTATTGACGGTGAAGGATGTGCTCCTCACGTCGACATCCGCGACGT TCACGTTGGCACACGACCCAAATACCGACATCAATTTCATCTCGAACGGAGTCGTGCTCTATACTCGCGTTGTCGGGACG AACCGGTATCATATTTCGGCAAAACCTGGAACGACGGTTATGATCGAATCCTCATACGGGTCAAAGAAAAAGACGCTCAC ATATAAGCTACCAAGTGCGACGATCCCATCGGTGACGTTGACGGACGAACAGACGAAACGGGTCGGGAAGACGTTACCGA ATGCGACCGTGACGCTAAAGAACGGTTCAAAAGTCATCGCGACGACGAAATCGAATGCGAGTGGGTCGTATACGCTCACG TTCAGCCGTCCACGTGCTGGAACGAAGCTCTATTTCGAGGCGAAGTCGGGAATTCATCGTGACGCGAAATCGGTTGTCGT CAAATCAGGTATCCGTCCAACAATCAGCACGGGGACCATCCGTTCGACGACAAAATCGGTAGCGGTGCGTACGAACGTCC CGTATGGCACGCTGTACGTCTACAACGGCAGTAAGTTGGTCGCCAAAAAGTCCATCGGCTCGACGACGACCAACCTCTAT ATCGGAACGCAGCGACGTGGCACGAAACTGACATTCAAAGTCGTGACACCTGCGAATCGAACGAATCAAACAACCAAATC TGTGTATTGA
Upstream 100 bases:
>100_bases TGCTTCTTTTTATTTACATAATTATCTTTCAAAAATCATAATTAACAATTATATTAAAAGGAGCAAAAAATAAATAAATT AAGGAAGGGTTTGTAAAAAG
Downstream 100 bases:
>100_bases ATAATTTGAAGGTGACTCTTGCAGTTTGAGTCACCTTTTTTAAGTTTGGTCAATCCTCTTCATTATTTTCTGAAAATTGT CGATAGTATAGGAAACACTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 909; Mature: 909
Protein sequence:
>909_residues MKRYLYTITLMMLLLMVPRQEAWAASVIEVGTKLEETIKVIPRSPFYLDYQDGKTRLHDPSNQSTVVIDFPGNLTTHSSG DEGSYGGVRSWIASLDRQEWIAVPQYDQPLIRVQRDGTTSRIDSLESPHRADLVSYDASRDVMLWRDSYKNEWALTDLKG TVKRTYPLISGQRLILGTNLDELIAFNTSDKSITHLSLETGEELGKTTFPNESLSIDFESKTDRLFMKGSNHLYVYDFAT RTIQTLNLNRQIHYDITSLVYHDGLYYGVTFDDSMVTIDLTENRITETSLRTRNTNSEFDLIENGYFVQDDQWLLPIERF GQKPKEMYTWLKATGNSEEGHTWLNHAYQLMATITTVNGTEHKVPVAELPTDVTQVESAQPFAEGYTIPSFDQLFSAKVS FAMLDHWKSYKPVKQLPLQIDTSFEYGAVGEITGMTAPNATVYLSCEKASFATCSSPVQADETGRFTLSSGIIEGNQTIE LYVSDAWDYRQATEASVKKKFILGQPVINNPTKVLTDTRIEGVSIQTEPHAKVEVRQLNSKTAFEVREVQADEHGVAQLT TYRSDQPWSYRIFFRVLGQERPYEMVYVTKDYPMPSFTWTKLPKTGDTTITVYNDKLDPMLAVSRNGRAESAKRLTKGLN VITLKEPLREGQTIKLVASFRPELTQTLEKKVTSDTPKVLTVKDVLLTSTSATFTLAHDPNTDINFISNGVVLYTRVVGT NRYHISAKPGTTVMIESSYGSKKKTLTYKLPSATIPSVTLTDEQTKRVGKTLPNATVTLKNGSKVIATTKSNASGSYTLT FSRPRAGTKLYFEAKSGIHRDAKSVVVKSGIRPTISTGTIRSTTKSVAVRTNVPYGTLYVYNGSKLVAKKSIGSTTTNLY IGTQRRGTKLTFKVVTPANRTNQTTKSVY
Sequences:
>Translated_909_residues MKRYLYTITLMMLLLMVPRQEAWAASVIEVGTKLEETIKVIPRSPFYLDYQDGKTRLHDPSNQSTVVIDFPGNLTTHSSG DEGSYGGVRSWIASLDRQEWIAVPQYDQPLIRVQRDGTTSRIDSLESPHRADLVSYDASRDVMLWRDSYKNEWALTDLKG TVKRTYPLISGQRLILGTNLDELIAFNTSDKSITHLSLETGEELGKTTFPNESLSIDFESKTDRLFMKGSNHLYVYDFAT RTIQTLNLNRQIHYDITSLVYHDGLYYGVTFDDSMVTIDLTENRITETSLRTRNTNSEFDLIENGYFVQDDQWLLPIERF GQKPKEMYTWLKATGNSEEGHTWLNHAYQLMATITTVNGTEHKVPVAELPTDVTQVESAQPFAEGYTIPSFDQLFSAKVS FAMLDHWKSYKPVKQLPLQIDTSFEYGAVGEITGMTAPNATVYLSCEKASFATCSSPVQADETGRFTLSSGIIEGNQTIE LYVSDAWDYRQATEASVKKKFILGQPVINNPTKVLTDTRIEGVSIQTEPHAKVEVRQLNSKTAFEVREVQADEHGVAQLT TYRSDQPWSYRIFFRVLGQERPYEMVYVTKDYPMPSFTWTKLPKTGDTTITVYNDKLDPMLAVSRNGRAESAKRLTKGLN VITLKEPLREGQTIKLVASFRPELTQTLEKKVTSDTPKVLTVKDVLLTSTSATFTLAHDPNTDINFISNGVVLYTRVVGT NRYHISAKPGTTVMIESSYGSKKKTLTYKLPSATIPSVTLTDEQTKRVGKTLPNATVTLKNGSKVIATTKSNASGSYTLT FSRPRAGTKLYFEAKSGIHRDAKSVVVKSGIRPTISTGTIRSTTKSVAVRTNVPYGTLYVYNGSKLVAKKSIGSTTTNLY IGTQRRGTKLTFKVVTPANRTNQTTKSVY >Mature_909_residues MKRYLYTITLMMLLLMVPRQEAWAASVIEVGTKLEETIKVIPRSPFYLDYQDGKTRLHDPSNQSTVVIDFPGNLTTHSSG DEGSYGGVRSWIASLDRQEWIAVPQYDQPLIRVQRDGTTSRIDSLESPHRADLVSYDASRDVMLWRDSYKNEWALTDLKG TVKRTYPLISGQRLILGTNLDELIAFNTSDKSITHLSLETGEELGKTTFPNESLSIDFESKTDRLFMKGSNHLYVYDFAT RTIQTLNLNRQIHYDITSLVYHDGLYYGVTFDDSMVTIDLTENRITETSLRTRNTNSEFDLIENGYFVQDDQWLLPIERF GQKPKEMYTWLKATGNSEEGHTWLNHAYQLMATITTVNGTEHKVPVAELPTDVTQVESAQPFAEGYTIPSFDQLFSAKVS FAMLDHWKSYKPVKQLPLQIDTSFEYGAVGEITGMTAPNATVYLSCEKASFATCSSPVQADETGRFTLSSGIIEGNQTIE LYVSDAWDYRQATEASVKKKFILGQPVINNPTKVLTDTRIEGVSIQTEPHAKVEVRQLNSKTAFEVREVQADEHGVAQLT TYRSDQPWSYRIFFRVLGQERPYEMVYVTKDYPMPSFTWTKLPKTGDTTITVYNDKLDPMLAVSRNGRAESAKRLTKGLN VITLKEPLREGQTIKLVASFRPELTQTLEKKVTSDTPKVLTVKDVLLTSTSATFTLAHDPNTDINFISNGVVLYTRVVGT NRYHISAKPGTTVMIESSYGSKKKTLTYKLPSATIPSVTLTDEQTKRVGKTLPNATVTLKNGSKVIATTKSNASGSYTLT FSRPRAGTKLYFEAKSGIHRDAKSVVVKSGIRPTISTGTIRSTTKSVAVRTNVPYGTLYVYNGSKLVAKKSIGSTTTNLY IGTQRRGTKLTFKVVTPANRTNQTTKSVY
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 101897; Mature: 101897
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRYLYTITLMMLLLMVPRQEAWAASVIEVGTKLEETIKVIPRSPFYLDYQDGKTRLHDP CCEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCCCCCC SNQSTVVIDFPGNLTTHSSGDEGSYGGVRSWIASLDRQEWIAVPQYDQPLIRVQRDGTTS CCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCHHEEECCCCCCCEEEEECCCCHH RIDSLESPHRADLVSYDASRDVMLWRDSYKNEWALTDLKGTVKRTYPLISGQRLILGTNL HHHHCCCCCCCCEEEECCCCCEEEEECCCCCCEEEECCCCCHHHCCCEECCCEEEEECCH DELIAFNTSDKSITHLSLETGEELGKTTFPNESLSIDFESKTDRLFMKGSNHLYVYDFAT HHHEEECCCCCCEEEEEECCCHHHCCCCCCCCCEEEEECCCCCEEEEECCCEEEEEEECC RTIQTLNLNRQIHYDITSLVYHDGLYYGVTFDDSMVTIDLTENRITETSLRTRNTNSEFD CEEEEEECCCEEEEEHHHHEEECCEEEEEEECCCEEEEEECCCCEEHHHHEECCCCCCCE LIENGYFVQDDQWLLPIERFGQKPKEMYTWLKATGNSEEGHTWLNHAYQLMATITTVNGT EEECCEEECCCCEEECHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHEEEEEEEEECCC EHKVPVAELPTDVTQVESAQPFAEGYTIPSFDQLFSAKVSFAMLDHWKSYKPVKQLPLQI CCCCCHHHCCCCHHHHCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCEEE DTSFEYGAVGEITGMTAPNATVYLSCEKASFATCSSPVQADETGRFTLSSGIIEGNQTIE ECCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCEECCCCEEE LYVSDAWDYRQATEASVKKKFILGQPVINNPTKVLTDTRIEGVSIQTEPHAKVEVRQLNS EEEECCCCHHHHHHHHHHHEEEECCCCCCCCCEEEECCEECCEEEECCCCCEEEEEECCC KTAFEVREVQADEHGVAQLTTYRSDQPWSYRIFFRVLGQERPYEMVYVTKDYPMPSFTWT CCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCEEE KLPKTGDTTITVYNDKLDPMLAVSRNGRAESAKRLTKGLNVITLKEPLREGQTIKLVASF ECCCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHHCCCEEEECHHHHCCCEEEEEECC RPELTQTLEKKVTSDTPKVLTVKDVLLTSTSATFTLAHDPNTDINFISNGVVLYTRVVGT CHHHHHHHHHHHCCCCCCEEEEEEEEEECCCEEEEEEECCCCCCEEECCCEEEEEEEECC NRYHISAKPGTTVMIESSYGSKKKTLTYKLPSATIPSVTLTDEQTKRVGKTLPNATVTLK CEEEEEECCCCEEEEECCCCCCCEEEEEECCCCCCCEEEECCHHHHHHHHCCCCCEEEEE NGSKVIATTKSNASGSYTLTFSRPRAGTKLYFEAKSGIHRDAKSVVVKSGIRPTISTGTI CCCEEEEEECCCCCCEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCE RSTTKSVAVRTNVPYGTLYVYNGSKLVAKKSIGSTTTNLYIGTQRRGTKLTFKVVTPANR ECCCCEEEEEECCCEEEEEEECCCEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCCCC TNQTTKSVY CCCCHHCCC >Mature Secondary Structure MKRYLYTITLMMLLLMVPRQEAWAASVIEVGTKLEETIKVIPRSPFYLDYQDGKTRLHDP CCEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCCCCCC SNQSTVVIDFPGNLTTHSSGDEGSYGGVRSWIASLDRQEWIAVPQYDQPLIRVQRDGTTS CCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCHHEEECCCCCCCEEEEECCCCHH RIDSLESPHRADLVSYDASRDVMLWRDSYKNEWALTDLKGTVKRTYPLISGQRLILGTNL HHHHCCCCCCCCEEEECCCCCEEEEECCCCCCEEEECCCCCHHHCCCEECCCEEEEECCH DELIAFNTSDKSITHLSLETGEELGKTTFPNESLSIDFESKTDRLFMKGSNHLYVYDFAT HHHEEECCCCCCEEEEEECCCHHHCCCCCCCCCEEEEECCCCCEEEEECCCEEEEEEECC RTIQTLNLNRQIHYDITSLVYHDGLYYGVTFDDSMVTIDLTENRITETSLRTRNTNSEFD CEEEEEECCCEEEEEHHHHEEECCEEEEEEECCCEEEEEECCCCEEHHHHEECCCCCCCE LIENGYFVQDDQWLLPIERFGQKPKEMYTWLKATGNSEEGHTWLNHAYQLMATITTVNGT EEECCEEECCCCEEECHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHEEEEEEEEECCC EHKVPVAELPTDVTQVESAQPFAEGYTIPSFDQLFSAKVSFAMLDHWKSYKPVKQLPLQI CCCCCHHHCCCCHHHHCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCEEE DTSFEYGAVGEITGMTAPNATVYLSCEKASFATCSSPVQADETGRFTLSSGIIEGNQTIE ECCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCEECCCCEEE LYVSDAWDYRQATEASVKKKFILGQPVINNPTKVLTDTRIEGVSIQTEPHAKVEVRQLNS EEEECCCCHHHHHHHHHHHEEEECCCCCCCCCEEEECCEECCEEEECCCCCEEEEEECCC KTAFEVREVQADEHGVAQLTTYRSDQPWSYRIFFRVLGQERPYEMVYVTKDYPMPSFTWT CCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCEEE KLPKTGDTTITVYNDKLDPMLAVSRNGRAESAKRLTKGLNVITLKEPLREGQTIKLVASF ECCCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHHCCCEEEECHHHHCCCEEEEEECC RPELTQTLEKKVTSDTPKVLTVKDVLLTSTSATFTLAHDPNTDINFISNGVVLYTRVVGT CHHHHHHHHHHHCCCCCCEEEEEEEEEECCCEEEEEEECCCCCCEEECCCEEEEEEEECC NRYHISAKPGTTVMIESSYGSKKKTLTYKLPSATIPSVTLTDEQTKRVGKTLPNATVTLK CEEEEEECCCCEEEEECCCCCCCEEEEEECCCCCCCEEEECCHHHHHHHHCCCCCEEEEE NGSKVIATTKSNASGSYTLTFSRPRAGTKLYFEAKSGIHRDAKSVVVKSGIRPTISTGTI CCCEEEEEECCCCCCEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCE RSTTKSVAVRTNVPYGTLYVYNGSKLVAKKSIGSTTTNLYIGTQRRGTKLTFKVVTPANR ECCCCEEEEEECCCEEEEEEECCCEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCCCC TNQTTKSVY CCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA