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The map label for this gene is yocB [H]

Identifier: 229916874

GI number: 229916874

Start: 1115936

End: 1116715

Strand: Reverse

Name: yocB [H]

Synonym: EAT1b_1147

Alternate gene names: 229916874

Gene position: 1116715-1115936 (Counterclockwise)

Preceding gene: 229916875

Following gene: 229916872

Centisome position: 37.23

GC content: 47.95

Gene sequence:

>780_bases
ATGGCATTATCAACTGAACTTGGAAAGATCAAGAAACTTCATAATGCAGAAGCAGGGGTGCTCAGTCTTTACTTGAGCAC
CAAGCCGAGTGAGCGGGATAAATGGGAGATTCATTTGAAGAATGAGTTGCGCCGGCTCGAACAAGAAGTCGAAGCGAGCG
GGGATGAGGCATTGGTGAAGGCGTTCAAAGGGGTGAGGGAACGGACCGAACAAGAGATTAAACATAATGAACATAAACTG
TTGCGAAGCATCGTCTTATTCGCGGAAGGGAACGACGGATTGTTCGAACTTCATTTCCTTCAACTCGATGTCGACAATGA
GTTTCACTATGGAAAAGAACCGGTCCTCGATCAAATTGAAAAATTAGATGCCGAGTTCCCGAATACCGGCATCTTGCTTC
CGCAGATGGATGCGATCACCGTCTATGATACGAGACTCGGTGAGGTCGAAGACGTCACGGTCTATGAACTCGATTTGAAT
TCGGATGAGTGGCGCAGGTATCAGGGACGTGGGTCGAGACAAAACGCTGCTTCAAGTAGTCAAGTCGATCAATTCGACAG
TCGAAAAGAAAAACAAATCCAACGATTCTATCGTGAAATCGCTGGCGAGATTCGATCACTACGGAAGAAACATCATTGGA
GCAAGATTGTCATCATCGGGCAAGAGCGGAGCGCCAGCCTCTTAAAAGAGGAGCTCAACATCGAGGTGGCGCGAGTGGTG
CATCGGAATCTCGGAAATGCAGAGGAAGAAGAAGTGCTGCGTCGGGCATTTGAAGGATGA

Upstream 100 bases:

>100_bases
TTTACCGAAAATGATTGTTGCTGGATTTTCAACGGTCACCATCACATCCGTCTTTATCACAGGGATACTCGCTGCGTTTA
TCTATTAAGGAGGAGTTACG

Downstream 100 bases:

>100_bases
GGAACAGGCGGGTGACAGTTGTCATCCGCCTTTATTCTGCCCATCGGTTGTCGTGTGTGAACGAAATCGTCAACCATTTC
TCATAAGGTAAGAAAGCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MALSTELGKIKKLHNAEAGVLSLYLSTKPSERDKWEIHLKNELRRLEQEVEASGDEALVKAFKGVRERTEQEIKHNEHKL
LRSIVLFAEGNDGLFELHFLQLDVDNEFHYGKEPVLDQIEKLDAEFPNTGILLPQMDAITVYDTRLGEVEDVTVYELDLN
SDEWRRYQGRGSRQNAASSSQVDQFDSRKEKQIQRFYREIAGEIRSLRKKHHWSKIVIIGQERSASLLKEELNIEVARVV
HRNLGNAEEEEVLRRAFEG

Sequences:

>Translated_259_residues
MALSTELGKIKKLHNAEAGVLSLYLSTKPSERDKWEIHLKNELRRLEQEVEASGDEALVKAFKGVRERTEQEIKHNEHKL
LRSIVLFAEGNDGLFELHFLQLDVDNEFHYGKEPVLDQIEKLDAEFPNTGILLPQMDAITVYDTRLGEVEDVTVYELDLN
SDEWRRYQGRGSRQNAASSSQVDQFDSRKEKQIQRFYREIAGEIRSLRKKHHWSKIVIIGQERSASLLKEELNIEVARVV
HRNLGNAEEEEVLRRAFEG
>Mature_258_residues
ALSTELGKIKKLHNAEAGVLSLYLSTKPSERDKWEIHLKNELRRLEQEVEASGDEALVKAFKGVRERTEQEIKHNEHKLL
RSIVLFAEGNDGLFELHFLQLDVDNEFHYGKEPVLDQIEKLDAEFPNTGILLPQMDAITVYDTRLGEVEDVTVYELDLNS
DEWRRYQGRGSRQNAASSSQVDQFDSRKEKQIQRFYREIAGEIRSLRKKHHWSKIVIIGQERSASLLKEELNIEVARVVH
RNLGNAEEEEVLRRAFEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019291 [H]

Pfam domain/function: PF10116 Host_attach [H]

EC number: NA

Molecular weight: Translated: 30034; Mature: 29903

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSTELGKIKKLHNAEAGVLSLYLSTKPSERDKWEIHLKNELRRLEQEVEASGDEALVK
CCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHH
AFKGVRERTEQEIKHNEHKLLRSIVLFAEGNDGLFELHFLQLDVDNEFHYGKEPVLDQIE
HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEEECCCCCCCCCCHHHHHHH
KLDAEFPNTGILLPQMDAITVYDTRLGEVEDVTVYELDLNSDEWRRYQGRGSRQNAASSS
HHHCCCCCCCEECCCCCEEEEEECCCCCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCHH
QVDQFDSRKEKQIQRFYREIAGEIRSLRKKHHWSKIVIIGQERSASLLKEELNIEVARVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
HRNLGNAEEEEVLRRAFEG
HHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
ALSTELGKIKKLHNAEAGVLSLYLSTKPSERDKWEIHLKNELRRLEQEVEASGDEALVK
CCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHH
AFKGVRERTEQEIKHNEHKLLRSIVLFAEGNDGLFELHFLQLDVDNEFHYGKEPVLDQIE
HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEEECCCCCCCCCCHHHHHHH
KLDAEFPNTGILLPQMDAITVYDTRLGEVEDVTVYELDLNSDEWRRYQGRGSRQNAASSS
HHHCCCCCCCEECCCCCEEEEEECCCCCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCHH
QVDQFDSRKEKQIQRFYREIAGEIRSLRKKHHWSKIVIIGQERSASLLKEELNIEVARVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
HRNLGNAEEEEVLRRAFEG
HHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]