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The map label for this gene is yjkA [H]

Identifier: 229916862

GI number: 229916862

Start: 1106545

End: 1107312

Strand: Reverse

Name: yjkA [H]

Synonym: EAT1b_1135

Alternate gene names: 229916862

Gene position: 1107312-1106545 (Counterclockwise)

Preceding gene: 229916863

Following gene: 229916861

Centisome position: 36.91

GC content: 53.39

Gene sequence:

>768_bases
ATGTCATATATTGAACTCGCGACGGCGCTCATCTTCGTCGTCATCCCGCTCGCCTTGACGCTCGTCCTACGACTCGGACT
TGAGCGTGATATTGTGATCGCAACCGTCCGCTCCATCATTCAACTGTTGATCATCGGCTATATCCTGACGTTCGTCTTTG
AGAGCGACAGTCCGATCTTCATGCTGTTGATGATTTTACTTATGATTGTCGCCGCGACACAAAACATCCGCCGGAAAGGG
GACGGCATTCCGGGCATCATGTGGATCATCGTCTTGACGCTCGTGACGATCGAAGCGCTGACGATGGGACTCATGCTCGG
ACTCGGTATCATCCCATTTGAGCCGGAAAAGGTCATTCCAATCAGCGGGATGGTCATCGGGAACAGCATGGTGTTGTCGC
TCCTGTTCTTGAACAAGTTCAAAGACGAGGTCGAGCGGAGTGACGACGTCATCGAACTCATTCTATCACTCGGCGGCACA
CCGAAAGTGGCCATCGACCGCAGCTTGAAGAATGCGATTCGCACGAGCATGATCCCGACCGTCGAGGCGCAAAAGACGAT
GGGGCTCGTCCAACTACCGGGAATGATGAGCGGTCTCATCATCGGGGGAGCAGACCCGATGGAAGCGGTCCTGTATCAAC
TCTTGATCCTGTTCTTGATTTTGACGACCGCCTCAATCTCGGCGACGCTCGTCGGTTATCTCGCGTACCCGCGTCTGTTC
AACGAGAAGATGCAGTATATCGGATTGACTTATCGGAAGGGGAAATGA

Upstream 100 bases:

>100_bases
GGTTCTTGAAGGCCGGCGAACTACTTGCATTTGGGGACGCATCGTTCATCGATGAGTCGGACAATCCCGTTATCCAACGA
TTCGTCAGGGGGGAAGATTG

Downstream 100 bases:

>100_bases
GCATGATCACAGGGATTCATCATGTGCAGCTCACGATTCCAACTGGAACGGAGCAAGAGGCGAAGGCATTTTACTGCGAT
TTTCTCGGTCTACGTGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MSYIELATALIFVVIPLALTLVLRLGLERDIVIATVRSIIQLLIIGYILTFVFESDSPIFMLLMILLMIVAATQNIRRKG
DGIPGIMWIIVLTLVTIEALTMGLMLGLGIIPFEPEKVIPISGMVIGNSMVLSLLFLNKFKDEVERSDDVIELILSLGGT
PKVAIDRSLKNAIRTSMIPTVEAQKTMGLVQLPGMMSGLIIGGADPMEAVLYQLLILFLILTTASISATLVGYLAYPRLF
NEKMQYIGLTYRKGK

Sequences:

>Translated_255_residues
MSYIELATALIFVVIPLALTLVLRLGLERDIVIATVRSIIQLLIIGYILTFVFESDSPIFMLLMILLMIVAATQNIRRKG
DGIPGIMWIIVLTLVTIEALTMGLMLGLGIIPFEPEKVIPISGMVIGNSMVLSLLFLNKFKDEVERSDDVIELILSLGGT
PKVAIDRSLKNAIRTSMIPTVEAQKTMGLVQLPGMMSGLIIGGADPMEAVLYQLLILFLILTTASISATLVGYLAYPRLF
NEKMQYIGLTYRKGK
>Mature_254_residues
SYIELATALIFVVIPLALTLVLRLGLERDIVIATVRSIIQLLIIGYILTFVFESDSPIFMLLMILLMIVAATQNIRRKGD
GIPGIMWIIVLTLVTIEALTMGLMLGLGIIPFEPEKVIPISGMVIGNSMVLSLLFLNKFKDEVERSDDVIELILSLGGTP
KVAIDRSLKNAIRTSMIPTVEAQKTMGLVQLPGMMSGLIIGGADPMEAVLYQLLILFLILTTASISATLVGYLAYPRLFN
EKMQYIGLTYRKGK

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=250, Percent_Identity=38.8, Blast_Score=176, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 28002; Mature: 27870

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYIELATALIFVVIPLALTLVLRLGLERDIVIATVRSIIQLLIIGYILTFVFESDSPIF
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
MLLMILLMIVAATQNIRRKGDGIPGIMWIIVLTLVTIEALTMGLMLGLGIIPFEPEKVIP
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEC
ISGMVIGNSMVLSLLFLNKFKDEVERSDDVIELILSLGGTPKVAIDRSLKNAIRTSMIPT
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
VEAQKTMGLVQLPGMMSGLIIGGADPMEAVLYQLLILFLILTTASISATLVGYLAYPRLF
HHHHHHCCHHHCCHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEKMQYIGLTYRKGK
HHHHHHHCCEECCCC
>Mature Secondary Structure 
SYIELATALIFVVIPLALTLVLRLGLERDIVIATVRSIIQLLIIGYILTFVFESDSPIF
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
MLLMILLMIVAATQNIRRKGDGIPGIMWIIVLTLVTIEALTMGLMLGLGIIPFEPEKVIP
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEC
ISGMVIGNSMVLSLLFLNKFKDEVERSDDVIELILSLGGTPKVAIDRSLKNAIRTSMIPT
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
VEAQKTMGLVQLPGMMSGLIIGGADPMEAVLYQLLILFLILTTASISATLVGYLAYPRLF
HHHHHHCCHHHCCHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEKMQYIGLTYRKGK
HHHHHHHCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]