| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916845
Identifier: 229916845
GI number: 229916845
Start: 1095784
End: 1096479
Strand: Reverse
Name: 229916845
Synonym: EAT1b_1118
Alternate gene names: NA
Gene position: 1096479-1095784 (Counterclockwise)
Preceding gene: 229916846
Following gene: 229916838
Centisome position: 36.55
GC content: 56.03
Gene sequence:
>696_bases ATGAAAATTGACTGGACACCGATCACCAAAGTCGTGGCCGAGGCACCGGATACATACACGTTCCATCTCGCCTTGCCACC TGAGTTCACGTGGCAAGAGGGGGCGCACACGCACCTCGCGCTCGAAGGGTTCAACGCCGGGGACAAGCCGGACCGAAGCC TCGTCCGCCATATGTCGATCTCGACATTGCCACACGAAGGGGCGATCGGCATCACGACCCGCATCAAGTCCGAATGCTCG ACGTTCAAATCGATCCTTCGCGACATGGTACCGGGGGACAAGGTCGCCTTGTTCAAGACACATTCGAACGTCCCACTTGA ACGGAGCGGGAAGAACGTCTATCTCCTATCGGCAGGTGTCGGACTCGCGACATTCCGTCCGATCGTCCTCGAGTACTTGG CGAACGGTGAAGGTGTCCCGCACCTCCATTCGTTAAACGTCGATTCGTCGAAGGCGTATCTGTTCGGTGACGTCTTCGAA TCGAACGAGCACTTCACGTCAGAGTTCGTCCCGAGTCGGAAAGACTACTACGAGCGCGTGGAGAGGATGGCATCCGACAA GGACGCCTTGTTCTACATCGTCGGCAGTGACGAGCTGTTGCGTGAAACGATCCAGGTGCTCCGGACGAACGGGGTGGCCT GTGACAATATCAAAATCGACAAACATGATTTTCAGCGAGAAGACTTTTTAGGCTGA
Upstream 100 bases:
>100_bases GCGGTGTACTGAGTCATCAGAAATTGAATCGTTGTACAACGGTAACTTTAAACCGCAGTATTATCAATACTTCAGTTACA TCAAACTAAGGAGGATTCAC
Downstream 100 bases:
>100_bases CACTCAAACCGGGGACACGTGCCCCGGTTTTTTCGTGCACAGTTGGACGAAGCGCTCGAAGATGCCACGTCCGTCCGGCG TTCCGATCGATTCGGGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MKIDWTPITKVVAEAPDTYTFHLALPPEFTWQEGAHTHLALEGFNAGDKPDRSLVRHMSISTLPHEGAIGITTRIKSECS TFKSILRDMVPGDKVALFKTHSNVPLERSGKNVYLLSAGVGLATFRPIVLEYLANGEGVPHLHSLNVDSSKAYLFGDVFE SNEHFTSEFVPSRKDYYERVERMASDKDALFYIVGSDELLRETIQVLRTNGVACDNIKIDKHDFQREDFLG
Sequences:
>Translated_231_residues MKIDWTPITKVVAEAPDTYTFHLALPPEFTWQEGAHTHLALEGFNAGDKPDRSLVRHMSISTLPHEGAIGITTRIKSECS TFKSILRDMVPGDKVALFKTHSNVPLERSGKNVYLLSAGVGLATFRPIVLEYLANGEGVPHLHSLNVDSSKAYLFGDVFE SNEHFTSEFVPSRKDYYERVERMASDKDALFYIVGSDELLRETIQVLRTNGVACDNIKIDKHDFQREDFLG >Mature_231_residues MKIDWTPITKVVAEAPDTYTFHLALPPEFTWQEGAHTHLALEGFNAGDKPDRSLVRHMSISTLPHEGAIGITTRIKSECS TFKSILRDMVPGDKVALFKTHSNVPLERSGKNVYLLSAGVGLATFRPIVLEYLANGEGVPHLHSLNVDSSKAYLFGDVFE SNEHFTSEFVPSRKDYYERVERMASDKDALFYIVGSDELLRETIQVLRTNGVACDNIKIDKHDFQREDFLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25943; Mature: 25943
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIDWTPITKVVAEAPDTYTFHLALPPEFTWQEGAHTHLALEGFNAGDKPDRSLVRHMSI CCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHH STLPHEGAIGITTRIKSECSTFKSILRDMVPGDKVALFKTHSNVPLERSGKNVYLLSAGV HCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEECCC GLATFRPIVLEYLANGEGVPHLHSLNVDSSKAYLFGDVFESNEHFTSEFVPSRKDYYERV CHHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEEEECCCCCCHHHHCCCCHHHHHHHH ERMASDKDALFYIVGSDELLRETIQVLRTNGVACDNIKIDKHDFQREDFLG HHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCEECCEEECHHHCCHHHCCC >Mature Secondary Structure MKIDWTPITKVVAEAPDTYTFHLALPPEFTWQEGAHTHLALEGFNAGDKPDRSLVRHMSI CCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHH STLPHEGAIGITTRIKSECSTFKSILRDMVPGDKVALFKTHSNVPLERSGKNVYLLSAGV HCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEECCC GLATFRPIVLEYLANGEGVPHLHSLNVDSSKAYLFGDVFESNEHFTSEFVPSRKDYYERV CHHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEEEECCCCCCHHHHCCCCHHHHHHHH ERMASDKDALFYIVGSDELLRETIQVLRTNGVACDNIKIDKHDFQREDFLG HHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCEECCEEECHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA